Acipenser ruthenus (sterlet): 117397257
Help
Entry
117397257 CDS
T07327
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04140
Autophagy - animal
arut04148
Efferocytosis
arut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117397257
04148 Efferocytosis
117397257
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117397257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117397257
Membrane trafficking [BR:
arut04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117397257
Hops complex
117397257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-C3HC4
zf-ANAPC11
zf-RING_5
Beta-prop_EML_2
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117397257
NCBI-ProteinID:
XP_033851878
LinkDB
All DBs
Position
44:complement(2656389..2664858)
Genome browser
AA seq
930 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKDPGDAGKGFTLPAGISACDSGRGHIVLGDMEGQIWFLTRSM
QPTPFQAYKLRVTHLFQLKQHSILVSVGQDEQGINPLVKVWNLDKRDSGNPLCTRIFSAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTCPITGLAFR
QSGKITNLFIATLEKVLCYTLSLKEYPRVELDTHGCALRCTALTDPSQDSQFIVAGDECV
YLYQPDERGPCFGFEGQKLLVHWYRGYLLLLTRDCKTPNKSEFGSREASPSEKQLLTVYD
LDNKFIAYSAAFGDVIDVLAEWGSLYILTRDRRLCVLQEKDTQTKLEMLFKKNLFVMAIN
LAKNQHLDSDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIMTSESEVHFDVEIAIKVLRQA
GYYSHAVFLAEKHTHHEWYLKIQLEDLKNYQEALRYIGRLPFEQAESNMKRYGKTLMHHV
PEETTRLLKGLCTDYRPSRETPADRESLGHTLGNKANSEEFIAIFVNNPRELRAFLEHMM
DVEAQSPQGVYDTLLELRLQDWAHEQDTQEKNSLQEAVLSLLKSENYSTVFDKALVLCQM
HNFKEGVLYLYEQGQLYQQIMHYHMQNEEYGKVVEACQRYGEKEACLWEQALGYFARKEE
DCKEYITAVLQHIDRNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQQESEQISEDERK
IREYRVETTQLRQEIEELRSSAKIFQKTKCSMCNSPLELPSVHFLCSHSFHQHCFESYAE
SEAECPTCAPDNRKVMDMLRAQDQKRDLHEHFHRQLKCSNDGFSVVADYFGRGVFNKLTL
ITDPPGGKAGAASLDSDLQRDLLIHTKRTV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtttctgcagtggagacggttcgtgttcttcgataaggagacggtgaaggat
cccggtgatgccgggaaaggctttaccctccctgctgggatatcggcatgcgactccggt
cgggggcacatcgtactgggagatatggagggtcagatttggttcctgacgcgctccatg
cagcccacccccttccaggcttataagctgcgtgtcacccacctgttccagctcaagcag
cacagcatactggtgtcagtggggcaggacgaacagggcatcaaccctctggtgaaggtg
tggaatctagacaaacgggacagcgggaatcctctctgcacccggatcttctcagccatt
cctgggaacaagcccacggaggtgtcctgcctgagcgtgcacgagaacctcaacttcatg
gccattggttttaccgatggcagtgtggtgctgactaaaggagacatcaccagagaccgg
cacagcaaaacactgacactgcacgagggcacctgcccaatcacggggctcgctttccga
cagtctggcaaaatcacaaacctgttcatagccaccctggagaaagtgctgtgctacact
ctctccctgaaggagtaccctcgcgtggagctggacactcacggctgtgccctgcgctgc
acagccctgaccgacccgtctcaggactcccagttcatcgtggccggggacgagtgcgtc
tacctgtaccagcccgacgagcgcggaccctgctttgggttcgaggggcagaaactgctg
gtgcactggtaccgcggctacctgctgctgctcacccgcgactgcaagacacccaacaag
tctgagtttggcagcagggaggcctctccctcggagaagcagctcctcactgtctatgac
ctggacaacaagttcatcgcctacagcgcggccttcggtgacgtcatcgacgtgctggcg
gagtggggctcgctgtacatcctgacgcgggaccgcaggctgtgcgtactgcaggagaag
gacacgcagaccaagctggagatgctttttaagaagaacctgtttgtgatggccattaac
ctggcaaagaaccagcacctggacagtgacggcctgtctgagatcttccggcagtatgga
gaccacctgtatgtgaagggggaccacgatggagccatacagcagtacatccgcaccatc
gggaagctggagccctcctatgtgatccggaagttcctggacgcgcagcggatccacaac
ctcactgcgtacctgcaggctctgcacaggcagtccctggccaacgccgaccacaccacc
ctgctgctgaactgctacaccaagctgaaggacagctccaagctggaggagttcatcatg
acgagtgagagcgaggtgcactttgacgtggagattgccatcaaggtgctgcggcaggcg
gggtattacagccacgccgtcttcctggcagagaaacacacccaccacgagtggtacctg
aagatccagctggaagacctcaagaactaccaggaggcgctgcgctacatcgggaggctg
cccttcgagcaggcggagagcaacatgaagcgctacggcaagacgctgatgcaccacgtg
ccagaggagaccacgcggctgctcaagggactctgcacagactacagacccagcagagag
accccagcagacagggagagcctgggccacaccctggggaacaaggcgaactcggaggag
ttcatcgcgatctttgtgaacaatccccgtgagctgcgtgcgttcctggagcacatgatg
gacgtggaggctcagtctccccagggcgtgtacgacaccctgctggagctgaggctgcag
gactgggcccacgagcaggacacacaggagaagaattctctacaggaggctgtcttgtcc
ctactcaagagtgagaactacagcacagtgtttgacaaggcgctagtgctctgccagatg
cacaacttcaaagaaggggtcctgtacctgtatgagcaaggccagctgtaccagcagatc
atgcactaccacatgcagaatgaggagtacggtaaggtggtggaggcgtgccagcgctac
ggggagaaggaggcctgtctgtgggagcaggcgctggggtactttgcccgcaaagaggag
gactgcaaggagtacatcaccgctgtgctgcagcacatcgaccgcaacaacctcatgccc
cccctgctggtggtgcagacgctggctcacaactcgacggccactctgtctgtgatcaag
gactacctgatcaacaagctgcagcaggagagcgagcagatctcggaggacgagcgcaag
atccgggaataccgcgtggagacgacccagctccggcaggagatcgaggagctgcgcagc
agtgccaagatcttccagaagaccaagtgcagcatgtgtaacagccccctggagctgccg
tccgtgcacttcctgtgcagccactcgttccaccagcactgcttcgagagctacgccgag
agcgaggccgagtgccccacctgcgcccccgacaaccgcaaagtgatggacatgctgcgg
gcgcaggaccagaaacgagacctgcacgagcacttccaccgacagctcaagtgttcgaat
gacgggttctcggtggtggctgactatttcggccggggggtctttaacaagttgaccctg
atcacggaccccccaggggggaaggcgggggctgcgagtctggactccgacctgcagaga
gacctgcttatccacaccaagaggaccgtgtga
DBGET
integrated database retrieval system
