Acipenser ruthenus (sterlet): 117397304
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Entry
117397304 CDS
T07327
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117397304
Cell adhesion molecules [BR:
arut04515
]
Immunoglobulin superfamily
ROBO family
117397304
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
C2-set_3
Ig_4
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
117397304
NCBI-ProteinID:
XP_034768907
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Position
44:complement(4054578..4076560)
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AA seq
1154 aa
AA seq
DB search
MHRVLLLFALWFCTWADGSRQCHCQCTCSPELAPSRDSRGPGREHTGQRPPRFPHLRHRA
HGKKGSWLRLDESPPRIVHHPSDLVVKADSPASLSCRAEGNPPPVIEWHRNGAPLETNRA
GGQSSAIVLPDGNLFFLRVVPGRRGHSDEGVYTCIARNSLGKATSNATLYIAALREEFRA
QPSDVEVAVGEPAVMNCTPPKGHPEPNITWKKDGALINRTQERYNILNGRLVIANAQKND
SGVYVCLAWNTVGERESRAGRLSVLEKPVFARKPSDATVKVGGSVQFRCEARGDPMPAVR
WSKEHGQLPSGRYEVNPDQTLRIHYITAPDSGRYTCTATNQVGSTSVSASLAVQEALDTG
QRDLHKELSMLRIHLENVTVHPLLSNAAHILWKVQSEPHHLSGFEVLCRSLMPASSDWTE
RKFPVQRSAVIGPLKRGYKYEFKVRPFVGGLYGRESNTKHLRIPEQVPSAPPLGVEVTMS
AENNGTALVSWEPPPHEAHNGIIRSYQVWCVRSGGQLSSNWTVDSGTHSLEITALDPDTQ
YWISVAAVNGAGVGQLSEPHLLFMEPTMEAAAPPPLDAGPLDQVLRVLRGPVFIGSAGAL
LWLALMVSAVCLYRRHGRQARVKHAHHTSASLYRMASEDLIIKHRMAAPDSPWSSSAWKS
APCSERYPGLWAQSKENPGFRKTTLPKNEKDPCPPDTAVPIVPDNCGLYGTFYVDLSGVG
LRTFSSPTRSPKVPHPGAKTPDAARFSQPVFKSSTDAEGQRLPWKQALPAQPNMGVLKES
WEKNYKRELHAVNSAPLVPTWQCSELLKSAPRANVARVCHIAKGGFPVGSKSAGSPKILH
YSASLRMIDVPPAPPPFPELEDDTQSLSSEEDSSRSTKLTVEGGSVLLGGAGPGPQEIPA
RDDPSYLTLSYSRFSTASFSLSLDEQNDGPLTAQEVEQYLELRHEAEDCSSVLSDSPPSL
PHPFSPTPTFGYICGPMPSDLDAEDLADDLDVPGSRQLRPRGGTPRRCPTPSSCCSEWEG
SLWNGWGSISEGNAPSARASLISSSDGSFMNDANFARVLAVAAETLGGGAFSDFSPPASP
LSGLYPAREPFLGGLESLPVWDWNTAWVEEMEARYSLSRRAEAMEPRGEGKQDERELDNT
CSLDPPTTPASHQH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcatagggtgttgcttcttttcgctttgtggttttgcacctgggcagatggatccaga
cagtgtcactgtcagtgcacctgctcgccagaactggcaccgtccagggactccaggggc
ccgggtagggaacacactgggcagcgcccaccccgtttcccccacctgaggcaccgggcc
cacgggaagaagggctcctggctgcgtttggatgagtctccccctcgcattgtgcaccac
ccctctgatctcgtggtgaaggctgacagcccagcctcgctgtcctgccgtgcagagggg
aacccgcccccggttatagagtggcatcgcaatggggcaccgctggagacgaacagggct
gggggccagtcatcggcaatcgtgcttcccgatggcaacctcttcttcctgcgcgtggta
cctgggagacggggccattccgacgagggcgtctacacctgcatcgcccgcaacagcctg
ggcaaagccaccagcaacgccacactctacatcgcagctctgagggaggagttccgtgct
cagcccagcgatgttgaggtggctgtgggggagcctgccgtcatgaactgcaccccgccc
aaagggcaccccgagcccaacatcacctggaagaaagacggggcgctcatcaacagaacc
caggagcgctacaatatcctgaacgggaggctcgttattgcgaacgcccagaagaatgac
tctggagtctatgtctgcttggcgtggaatacagtaggagagagagagagcagggcaggg
cgtctgtctgtgcttgagaaaccagtgtttgcccggaagccaagtgatgccacggtgaag
gttggcggctcggtgcagtttaggtgtgaggcacgaggggaccccatgcctgctgtgcgc
tggagcaaggagcacggacagctaccctctgggaggtacgaagtgaatccagatcagacc
ctgcggatacactacatcacagccccggactccgggcgctacacctgtacagctaccaat
caagtgggctccacctctgtgagtgcctccctcgctgttcaggaggccttggatacaggg
cagagggacctgcacaaagagctgtccatgctgcgcatccacctggagaacgtcactgtg
catcctctcctatccaacgcagcccacatactgtggaaagtgcagtcagagccccaccac
ctgtctggctttgaggtgctgtgccgctccctcatgcccgctagctctgattggacagag
aggaagtttcctgtgcagcgtagcgctgtgattggcccgctgaagagggggtacaagtac
gagttcaaggtgcgcccgttcgtgggaggtctttacgggcgggagagcaacaccaaacac
ctgcgcatcccagagcaagtccccagcgctccgccactgggtgtggaagtgacgatgtcc
gcagagaataatggtacagccctggtgagctgggaacctccccctcatgaggcgcacaat
ggaatcattcggagttaccaggtgtggtgtgtgcgttcggggggccagctgtcctctaac
tggacagtggacagcgggactcacagcctggagatcacagcattggaccctgacacacag
tactggatcagtgtggcagccgtcaacggagctggagtggggcagctgagcgagccccac
ctcctcttcatggagcccaccatggaggctgctgcccccccacccctcgacgcgggcccc
ctggatcaggttctgagggttctgcggggccctgtgtttatcggcagcgctggcgccctc
ttgtggctggctctcatggtctcggcggtgtgtctgtaccgacgacacggccggcaagcc
cgggtcaaacacgcccaccacacctcagcaagcttgtacagaatggcaagtgaagacctc
attatcaaacacaggatggcagctcctgactccccttggagctccagcgcctggaagtca
gccccctgcagcgagcgctatcctggactgtgggcccagagcaaggagaaccctggcttc
aggaagaccactttgccgaagaacgagaaggacccctgccctccagacacagccgtcccc
attgtgcctgataactgcggtctctacggtaccttttacgtggatctctcaggggtggga
ctgaggacctttagcagcccgacccgcagcccgaaggtcccgcatcccggtgccaagact
cccgatgctgcccggttctctcagcctgtctttaaaagcagcaccgacgcagaggggcag
aggttaccgtggaaacaggcactgcctgcccagcccaacatgggcgtgctcaaggaatca
tgggagaaaaactacaaaagagagctgcatgctgtgaacagcgctcccttggtgccaacg
tggcaatgttctgagctgctgaagagtgcccccagagccaacgttgccagggtgtgccac
attgctaaaggtggttttcctgtgggttcgaagtcagccggctcacccaagatcctgcac
tactctgcttctctgcggatgattgatgtgccgccggccccgccccctttccctgagctc
gaggacgacacccagagcctgagctccgaggaggactccagcaggtccactaagctgact
gtggaaggaggctctgtgctgttggggggagctggtccaggaccccaggagatccctgcc
agggatgacccctcatacctcaccctgtcttacagccggttctccactgcgtccttctcc
ctctccctcgatgagcagaacgacggccccctgactgctcaagaggtggagcagtacctg
gagctgaggcatgaagctgaggactgcagcagtgttctgtcggacagtcctccctctctg
ccacacccattttccccgacccccacttttggatacatctgcgggccgatgccctctgac
ctggacgcggaagaccttgctgacgacctggacgtgccggggtcacggcagctccgccca
cgtgggggcaccccccgtcgctgccccaccccctcgtcctgctgcagcgaatgggagggc
tctctgtggaacggctggggctccatctcggaggggaacgcccccagcgcccgcgccagc
ctgatcagctcctccgacggatccttcatgaacgacgccaacttcgccagagtgctcgcc
gttgccgcggaaacactggggggaggagccttctcagacttctcacccccagcctcccct
ctgagtggtctctacccagcgcgggagccttttcttggggggctggagtcactcccggtg
tgggactggaacacagcgtgggtggaggagatggaggcgcgatattccctgtctcggagg
gcagaagccatggagccacgaggggagggaaagcaggatgagagggagctggataacacc
tgctctctggaccctcccaccacgcctgcctctcatcaacactga
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