Acipenser ruthenus (sterlet): 117397423
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Entry
117397423 CDS
T07327
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117397423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117397423
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
117397423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
117397423
NCBI-ProteinID:
XP_033852175
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All DBs
Position
42:428398..443198
Genome browser
AA seq
1281 aa
AA seq
DB search
MDALDHMLTDPLEPGHGGRIMEDCMLGNTRVSLPEDLLEDPEIFFDVVSASTWNDVLLDS
QRQHLLQFLPQFPEDSAEQRERVITDLFGDENFRFGNPLHIAQKLFRDGYFNPEVVQYRQ
LCIKSQRKRYLQSQQQYYHRLLKQILISRKELLDSARRSGPDLVLKRRYPSASTRPEERE
QRAKRRVAKILREVKEDCGDSALSSDEEDLGSWLPPSPLHPSNLSVSLRVVPSLSTQDMK
TTEKPELGDGDLKLMLKRQRERRKRQPDRPDLMTSDLNLNDIMTRVNAGRKGSLVALFDL
AVPKKRLKEKDKEEKKKKKMKLIKQEPEDSPELLGVPECPPAPPEPPPAPVLPVVKEEPL
EEVKGSPLFVEEIAVSFFSLLEEILHLECQASSAMIEEKVQQWQASPASTLNPWFSAAPN
WAELVPSALQFLSGESKAGVMALPSGFTPFVEFKDRTQQWKWIIPSQDGEKDLGMLCQLW
LETKDQPVVKQESEELSDSIPPTPRVRTDYVVRPSTVEERRTFQEQERQRYDQPHKAFTF
RMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRA
EICELLKDSQFLAPEVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEE
FERIHQAQAAAAKAKKALQQKPKPAPKPKSSSKEGGPKTPGGGAGEQAEPGSLQSSVSSQ
PATPKSPTPPCVPTPSKTAASAEPAKTSQSVLLVSPSSMPQLSSVLCTSQPSPLPPHQQP
PHQAGMQPAARVVAHSVTSTLPQVRVVTAQAGLTTSPGSQQASLVHQGHQQIRVPVTVAH
SKGITQTVVTLPLRTQSAGSPVQVQASRTQTSITVTGLASAVTVTKSSLSSPGSPAHTST
PSTVLQSIAGQNIIKQVAITGQLGMKSQAGAGIPLTATNLRIQGKDVLRLPPSSITTDSK
GQTVLRITPDMMATLTKSPVTTVKLTPDMLSAAAAAASSGGRPLSATLHVTSSSAAETVS
AIKAACSSIGGGATSLVKSEAASIRLMPALSVTMADQKGKTIAAATSADTKPATTIRIMP
GLGVIPQKPGQTITVATAGGKQVPASSGAPVSGAATVTIATGSMGGHKGGTGTPFSLGAG
TATMRQVPVSATMVSTAQQGKLPARITVPLSVLSQPLKGKSMVTAPLLKGNIGTNISSLG
RNIILTTMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVQTQHLQQRTASGSP
KPVSTVVVTTAPSPKRTPDPQ
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggacgccctggatcacatgctgaccgaccccctggagccgggccacgggggtcgcatc
atggaggactgcatgctgggaaacaccagggtcagcctgccagaggacctgctggaagac
ccggagatctttttcgatgtggtgagtgcgagcacctggaatgatgtgctgttggactca
cagcggcagcacctcctccagttcctgccgcagtttccagaagactccgcggagcaacgg
gagcgggtgatcacagacctgttcggggacgagaacttccgcttcgggaaccccctgcac
atcgcccagaaactcttccgagatgggtacttcaaccctgaggtggttcagtacaggcag
ctgtgcatcaagtcccagaggaagcgctacctgcagtcccagcagcagtattaccacagg
ctgctcaagcagatcctcatctccaggaaggagctgctggactcggcgcgacgcagcggg
cccgatctggttctgaagcgccgttacccctctgcttcgacccggcccgaggagagggag
cagagggccaagagacgggtggccaagatcctgcgggaggtgaaggaggattgcggggac
agcgccctgtcatccgatgaggaagacctgggctcctggctgcccccctctcccctgcac
ccctcgaacctcagcgtgtctctcagggtggtcccgagcctgtccacgcaggatatgaag
accacagaaaagccagaactgggggatggagatttgaagctgatgctgaagagacagaga
gagagaaggaaacggcagccggaccgccctgatctgatgacgtcagacctcaacttgaat
gacatcatgactcgcgtgaatgcagggaggaagggctcgctcgtagcgctgttcgacttg
gcagtgcccaagaagaggctgaaggagaaagacaaggaggagaaaaagaagaagaagatg
aagctgatcaaacaggagccagaagactctcccgagctgctgggggtcccagagtgcccc
ccagctccccccgagcccccccctgccccagtgctgccggtggtcaaggaggagcccctg
gaggaggtgaagggctcccctctctttgtggaggagatcgcagtgagcttcttcagtctg
ctagaggagatcctgcatctggagtgccaggccagctcagctatgatagaggagaaggtt
cagcagtggcaggcctctccagccagcacactgaacccgtggttctctgctgcacccaac
tgggctgagctggtaccgtcagcactgcagtttctgagtggagaaagcaaagcgggagtc
atggctctgcctagtggcttcaccccctttgtggagttcaaagatcggacacagcagtgg
aagtggatcatccccagccaggacggtgagaaggatcttggtatgctgtgccagctgtgg
ctcgagaccaaggaccagcctgtagtcaagcaggagagtgaggagctgtcagactccata
ccccccacccccagagtacggacggactatgtggtgcgtcccagtactgtagaggagaga
cgcaccttccaggaacaggagcggcagcgctatgaccagcctcacaaggccttcacgttc
cgcatgcacgggtttgagtccgtggtggggcctgtcaagggcgtgtttgacaaggagacg
tccctgaacaaggccagagagcactccctgctgcgctcggaccggccagcctacgtgacc
atcctctcgctggtgcgcgacgctgcggccaggctgcccaatggagagggcactcgcgcg
gagatctgtgagctgctcaaggattcgcagttcctagcaccggaggtcaccagtgctcag
gtgaacacagtggtgagcggagccctggacaggctgcactatgagaaggacccctgtgtg
aagtacgatatcggacgcaagctgtggatctacctgcaccgtgaccgcagtgaagaggag
ttcgagaggatacaccaggcacaggccgccgctgccaaggcgaagaaagccctgcagcag
aagcccaagccggccccgaaacctaagtccagcagtaaggagggaggaccgaagacacca
ggagggggtgccggtgagcaggctgaacccgggtctctacagagcagcgtctcgtcccag
cctgccacccccaaatcacccacacccccctgcgtccccactcccagcaagactgcagcc
agtgctgagccagccaagaccagccagagtgtgctgctggtctctccgtcctcgatgccc
cagctcagctctgtcctctgcaccagtcagccctcccctctgccccctcatcagcagccc
ccccaccaggccgggatgcagcctgcagcgcgggtggtggcacactcggtcaccagcact
ctgccgcaggtgagggtggtcactgcgcaggctggtctcaccacctcacccggcagccag
caggcctcgctggttcaccaagggcatcagcagatcagagtgccagtcacagtggcacac
agcaagggcatcacacagacggtggtgactctgcccttgcgcactcagtccgccgggagc
ccggtgcaggttcaggcctctcggacacagacgagcatcacggtgaccggcctggcatcg
gcagtgaccgtcaccaaatcctctctgagctcccctggcagcccggcacacacctccaca
cctagcaccgtcctgcagagcatcgcggggcagaacatcatcaaacaggttgccatcaca
ggtcagctgggcatgaagtcccaggcaggagctggcatccctctgaccgccacgaacctg
cgtatccagggcaaggacgtgctgcggctgcccccttcctccatcaccacggactccaag
gggcagacggtgctccgcatcactccagacatgatggccacgctcaccaagtcccctgtc
acaacggtcaagctgacgccggacatgctgagcgccgcagcggccgcagcttcctcgggg
ggcaggcctctgtccgccactctgcacgtgacgtcatcctccgcggccgaaacggtctcc
gccatcaaggcagcctgcagctccatcggcgggggtgccaccagcctggtcaaatcggaa
gccgcctcaatccgcctgatgccggcgctgtccgtcaccatggccgaccagaaaggcaag
accatcgcggccgccacctctgccgacaccaagccggccaccaccatccgcatcatgcca
ggcctgggggtcatcccccagaaaccgggccagaccatcaccgtggcgacggctggcggc
aagcaggtgccagcgtcgtcgggggcccccgtttctggggcggccacggtaaccatagcg
accggcagcatgggcggccacaaggggggcactggcacgcccttctcgctgggggcggga
acggccacgatgaggcaggtgccggtgagcgccacgatggtgtccaccgcacagcagggg
aagctgcctgctcgcatcactgtgcctctctctgtgctcagccagcctctgaaagggaag
agcatggtgacagcacccttactcaagggcaacatcgggaccaatatcagcagtctgggc
aggaatatcattctgaccacgatgccagcgggaaccaagctgatcgccgggaacaaaccg
gtcagcttcgtcacggcccagcaactccagcagctgcagcagcagggccaggccacgcag
gttcgaatccagaccgtccaaactcagcatctgcagcagagaacggcctcgggctccccc
aaaccggtctccacggttgtcgtgacgacagcaccctccccgaaacggactccggaccct
cagtag
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