Acipenser ruthenus (sterlet): 117397438
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Entry
117397438 CDS
T07327
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117397438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117397438
Cell adhesion molecules [BR:
arut04515
]
Immunoglobulin superfamily
L1 family
117397438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
117397438
NCBI-ProteinID:
XP_033852205
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All DBs
Position
37:complement(3562966..3626903)
Genome browser
AA seq
1387 aa
AA seq
DB search
MLVRGRELSLGGVALLLWLCCGVGGIEVPLDPRIQQEIKQPPTITKQSVKHYIVDPRDNI
IIECEAKGNPIPSFSWARNGKVFNVAKDPRVSMRHRAGTLEIGFRSGGRPEEYEGEYQCF
AWNEYGTALSSKILLRVSKSPLWPKENLEPREVTEGSPIILPCNPPPGLPPPLIFWMNSA
MMPIVQDKRVSMGLNGDLYFSNVMAKDGLTDYSCNARFQFTHTIQQKNPFSLKVITKEPH
NDTSSLNHTDYYSARGVPETAPAFLSPTGTASSKTVLRGEDLLLECIASGVPTPDIKWFK
RGGDLPALKTKLENFNKTLRITGVSEEDSGEYFCLANNKMGGTRHVVAVTVQAAPYWLNK
PTNLVLAPEEDGRLVCRANGNPKPTIQWLVNGEAIENASPNPSRKVSGDTIVFRSVQIGG
SAVYQCIASNKHGYLLANAFVNVLDMPPRMLAPWNQLIKVIENNRTLLDCPYFGSPLPTL
RWFKNGQGSNLDGGQYRVYDNGTLEIKRARKEDQGTYTCVATNILGKAENQVRLEVKEPT
RIIRAPEDLIAKQGTPARFDCRIKHDPTMRLTVTWLKDDKALTMGWRGFVRTVGKWLKEV
EGMFYPRVKKDEESMTIRNVNENDEGLYTCVVSTELDEDSATARLTVLASTLTSTSRTGI
IPDRPDPPVDLELTDPSEKSVRLTWIPQDDNHSPITEFLVQYEEDRWERGKWHNLSSYPG
NLNSVILQLSPYVNYQFRVLAINEIGASNPSRPSERYQTNGAPPELIPQGIRGKGSKKTN
MEITWEMVPGMDHNGPNFRYVVWWRRRDSREEWKNITTTYLKYVVTDTDTYIPYEIRVQA
QNDFGLGPEGPIVIGYSGEDYPRAAPSNLRVRPSATKTVVYWSHVSAESVQGELKEYKVY
YTRESSQLRGLSVSRVKKSTSFTSWTSRPSGVVSGLIPYSNYKLYMVAVNGRGEGPPSVT
VDFQTPEGVPAVPKYLRIQQRNVDAIYLDWDHPVEPNGIITGYLLKYQTVNGSRTGKMIT
ENLSANTTSYTLRLSDRYTRYKFYLSARTQVGTGEVYIEESPDFANEVNASSVVLSLPPT
PTVLVTSDTSPSTTVTTTTTATTAAPSPTTTPTTTTVAMTTTTKSPLSAITHIQMRETPV
SRQIWNLTVSPNSNYVNISWTHNFLPDTTEFVIEYTDSNKTVKSVTVKHETPVKLAGLAE
GAKYSVRVYSREYDFISSKTVPFETSAAYTKDQVDIATQGWFIGLMCAIALLVLILLIVC
FIKRSRGGKYPVRDKKDLPLDPMERKDQDGSFDYRSLERLNGVTTLPYIKRDEDNKPLQG
SQTSLEGTIKQQESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPV
NAIYSLA
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgagggggcgggagctctctctggggggtgtggctctcctgctctggctgtgc
tgtggggtgggcgggatcgaagtaccgctggacccaagaatccaacaagagattaaacag
cctccaaccatcacgaagcagtcagtgaagcactacatcgtggaccccagagacaatatc
attatcgagtgtgaagccaaggggaaccccatacccagtttctcgtgggcacggaacggg
aaggtcttcaatgtggcgaaggacccgcgggtctcgatgcggcaccgcgccggcacgctg
gagatcggcttccgcagcggggggcggccggaggagtacgagggggagtaccagtgcttc
gcctggaacgagtacggcactgcgctgtccagcaagatcctgctgcgggtctccaagtct
cctctgtggcccaaagagaatctggagcctcgggaggtgactgagggctctcccatcatc
ctgccctgcaaccctccccctggactgcctccccccctcatcttctggatgaacagcgct
atgatgccaattgttcaggacaagcgggtctccatggggctgaacggggatctctacttc
tccaatgtgatggccaaggacgggctgacagactacagctgcaacgcccgcttccagttc
acacacactatccagcagaagaaccctttctccctcaaagtgatcaccaaggaaccccat
aacgatacgtcctctctgaaccacactgactattacagtgctcgcggagttccggagacc
gcgcctgcctttctctctcccacgggaacagcgagctccaagacggtgctgcgcggagag
gatctgcttctggagtgtatcgcctcgggagtgcccacccccgatatcaagtggtttaag
agggggggggatctccccgccctgaagacgaagcttgagaacttcaacaagactctgcgc
atcaccggggtatcggaggaggactcgggggagtacttctgtctcgccaacaacaagatg
ggggggacccgccacgtggtggctgtcacagtgcaagctgccccctactggctgaataag
cccactaacctcgtcctggcccctgaagaagatgggaggctggtgtgtcgagccaatggg
aaccccaaacccaccatccagtggctggtcaacggagaggccatagagaatgcctcccca
aacccgagccgcaaggtttccggtgacaccatcgtcttccgttcggtgcagataggcggc
agcgctgtgtaccagtgcatcgcctccaacaagcatggctacctgctggctaacgccttt
gttaatgtactggacatgccaccgcgtatgctggccccgtggaaccagcttatcaaggtg
atcgagaacaaccgcaccctcctcgactgcccctactttggctctcctctgcccacgctg
cgctggtttaagaacggacagggcagtaacctggacggggggcagtaccgcgtctacgac
aacggaactctggagatcaagcgcgctcgcaaggaggaccagggcacctacacctgcgtg
gcgacaaacatcctgggcaaggccgagaaccaggtccgcctcgaggtcaaagagcccact
cggatcatccgagccccggaagatctgattgcgaagcaaggcacgccggcccgattcgac
tgccgcatcaagcacgaccctaccatgcgcctcaccgtcacctggctcaaagatgacaaa
gcgctgaccatgggctggagaggttttgtacggactgtaggaaagtggttgaaggaggtg
gagggaatgttctatcccagggtgaagaaagacgaggaatcgatgaccatccgaaatgtg
aatgagaacgatgagggtctgtacacctgtgtggtgagcactgagctggatgaagactct
gccacagcgcgcctcactgtcctggcttcaaccttaacctctaccagccgtactggaata
attccagaccgcccagacccccctgtggacctggagctgacggacccttcagagaagagc
gtgaggctcacctggataccccaggatgataaccacagtccaattacagagttcctcgtt
cagtatgaagaggaccgatgggagagagggaagtggcacaatctctccagttaccccggc
aacctcaactccgtcatcctgcagctctctccctacgtcaactaccagttccgcgtcctg
gctatcaatgagatcggagccagcaaccccagccggccgtccgagcgctaccagaccaac
ggggcccctccagagttgattccccaggggattcgcggtaaggggtccaagaagacgaac
atggagatcacctgggagatggttccggggatggatcacaacgggcctaactttcgctac
gtggtgtggtggcggcggagggactcccgtgaggagtggaagaacatcacgaccacgtac
ctgaagtacgtcgtgaccgacaccgacacctacatcccctatgagatcagagtgcaggca
cagaacgacttcgggctgggccctgagggccccatagtgatcggctattcaggggaggac
taccccagggcagctcccagcaacttacgggtcaggccatccgctaccaagaccgtggtg
tactggagccacgtctcagcagagagcgtgcaaggggagctgaaggaatacaaggtgtat
tacacgcgggagagcagccagctcaggggactcagtgtgtctcgggtcaagaaatcgacc
agctttacctcctggacgtccaggccctcgggcgtggtgtccggtctcatcccctacagc
aactacaagctgtacatggtggcggtaaacggcaggggggaggggcctccctccgtcacg
gtggacttccagacccccgagggagtgcctgctgtcccgaaatacttacgaattcagcag
aggaacgtggacgccatatacctggactgggaccacccagtggagcctaacggcatcatc
acaggatacctcctcaagtaccagactgtgaatgggtctcggactggcaagatgataaca
gagaacctctctgccaacaccacaagttacacgctgcgactgagtgaccgctacacgcga
tacaagttctacctgagcgcccggacgcaagtgggtacgggagaggtgtacatcgaggag
tctcccgactttgccaatgaagtgaatgccagctcagttgttctgtcgctaccacccacc
ccaacggttttggtaacctctgatacctctcccagcaccacggtcacaactactactact
gctactactgctgctccctctcccactacaactcccactactactactgtcgccatgaca
actacaaccaagagtcctttgtcagctatcactcacattcaaatgcgtgaaacccctgtg
agcagacagatctggaacctgacggtctctccgaacagtaactatgttaacatcagctgg
actcacaacttccttccagacaccaccgagtttgtcattgagtacactgacagtaacaag
acagtgaaaagcgtgacggtcaaacacgagacccccgtcaagctggccgggctggcggag
ggggccaagtacagtgtgcgggtttactctcgagagtacgacttcatcagcagcaagacc
gtcccctttgagaccagcgcagcttacaccaaggaccaggtggacatcgccacccagggc
tggttcatcgggctgatgtgcgccatcgccctgctggtgctgatcctcctcatcgtctgc
ttcataaagaggagccgcgggggcaagtacccagtgcgggacaaaaaggaccttccttta
gatcccatggagcgtaaggaccaggatgggtctttcgattaccggtctcttgaaaggtta
aacggtgttaccacacttccttatattaaacgcgatgaggataacaagcccctgcagggc
agccagacctctctggaaggtactatcaagcagcaggagagtgacgacagcctggtggac
tacggggaaggcggggatggccagttcaacgaggacggctccttcatcggccagtacacc
gtcaagaaggacaaggaggaaactgagggcaacgagagctccgaggccacgtctcctgtc
aatgccatctactcactggcgtaa
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