Acipenser ruthenus (sterlet): 117397673
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Entry
117397673 CDS
T07327
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117397673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117397673
Spliceosome [BR:
arut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
117397673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
117397673
NCBI-ProteinID:
XP_033852335
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MSMKRERDPELGEDDEDEVPAKAVRCKEISEDCRSRHCPYLDTINRSVLDFDFEKLCSIS
LSHINVYACLICGKYFQGRGLKSHAYTHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLE
DITYVLKPTFTKKHIANLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVP
PLRNYFLEEENYRTIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCS
KKNFQITKQGDAVDFLSWFVNALHGALGGTKKKPSIITKVFQGSMRIFSKKLPHPDLPAE
EKEALLLNEEYQEKMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGSTEK
EYKTYKENFLKRFQLTQLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEA
QVTEKNTTYDLVANVVHDGKPSEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAY
IQIWKRREEDDDEINQHGA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaagagggagagagaccctgaactgggggaggacgacgaagatgaggttcca
gcgaaggcagtgagatgcaaggagatcagtgaagactgtcgaagccgacactgcccgtac
ctggacaccattaacaggagtgtcctggatttcgattttgagaagctgtgctccatttca
ctctcccacatcaacgtctacgcctgtctcatctgtgggaaatatttccaaggtcgtggt
ttgaagtctcatgcctacacacacagtgttcagttcagccatcatgttttccttaacctg
cacacccttaagttttactgcctgccggacaattatgagatcatcgactcctccttggag
gacatcacatatgtactgaagcctacctttacaaagaagcacatcgctaacctggacaaa
caaggcaaactgtaccgtgcttacgatggtaccacctacctgccgggcattgtgggattg
aacaacatcaaggcgaatgactatgccaacgtggtgctgcaggcactgtcgaacgtgccc
ccgctgcgtaactatttcctggaggaggagaactaccggaccatcaagcggccacctgga
gacatcatgttcctgctggtgcagcgctttggggagctcatgaggaagctgtggaacccg
cgcaacttcaaggctcacgtctcaccccacgagatgctgcaggctgtcgtgctgtgcagc
aagaagaacttccagatcaccaaacagggtgatgctgtggactttctctcctggtttgtg
aatgccttgcatggggccctcgggggaacaaagaaaaagccctcaataattacaaaggtg
ttccaggggtccatgcgcattttctccaagaagctccctcaccctgatctgcctgcagag
gagaaagaggcgctgctgctgaatgaggagtaccaggagaagatgtccgagtcgaccttc
ctgtacctgaccctcgacctgcccactgcacccctctacaaggatgagaaggagcagctc
atcatcccacaggtccccctcttcaacatcctcggcaagttcaacggcagcactgagaag
gaatacaaaacctacaaggaaaacttcctgaagaggtttcagctgacccaactgcctccc
tacctcatcttctgcatcaagagattcacaaaaaacaacttctttgttgagaagaacccc
accattgtcaacttccctatcacaaatgttgacctgcgggagtaccttactgaggaagct
caggtgacagaaaagaacacaacatatgaccttgtggctaacgtcgtgcacgatgggaaa
ccatcggagggggcttatagaatccacgtgctgcatcatgggacagggaaatggtatgaa
ctccaggatcttcaggtgactgacatcctgccccagatgattacgctctcagaggcttat
attcagatatggaagagacgagaggaagatgatgatgagattaatcagcatggtgcgtga
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