Acipenser ruthenus (sterlet): 117398500
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Entry
117398500 CDS
T07327
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117398500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117398500
03036 Chromosome and associated proteins [BR:
arut03036
]
117398500
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117398500
Coactivators
SAGA/TFTC/STAGA complex
117398500
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117398500
STAGA complex
117398500
TFTC complex
117398500
SAGA complex
117398500
SLIK complex
117398500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Histone
Motif
Other DBs
NCBI-GeneID:
117398500
NCBI-ProteinID:
XP_033853324
LinkDB
All DBs
Position
55:284034..307090
Genome browser
AA seq
629 aa
AA seq
DB search
MADREERKFAEVPRDSVKLMAESVGVELSDDIAAMLAEDVCYRLREAAQNSSQFMRHAKR
RRLTVEDFNRALRWSNVEAVCGYGSQDALPFRPLKEGELYFVEDREINLVELALATNIPK
GCAETMVRVQVSYLDGKGNVEPQGAVPTAVQSLTDDLLKYYQQVTRAILGEDQQLMKVAL
QDLQTNSKIAALLPYFVHVVSGVKSVSHDLEQLSRLLHMVKSLVQNPFLYLGSYIKSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWAHGDLVGGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLSAYWSNLQAVLDDDSVSNAQVKADGHKVYG
AILVAVEKLLKMKAQSRSVPAEGSVAVRERSFPGLSPPQEPVSEPGFGIASHLLQGAAGV
PAEEPVPVPLPVMYRELYAFFGDSLAVRFSTGPGIEPRASRAAPHQPPDSKKEGMGPDTT
RKMPQLTASMTISPRQDSSPKNEPSLPAVQNSSAAPSRFQRSSSSSLQRSKPPPSKAAQR
SAGPPREVFQKSRFPLPPATAPFSFLIAGRQTGRRCQGRRFQTSFPQLHPPNPSAQPPRG
YAHKLPVIGRMGKPIKRWVCSQYSLHLPL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagggaggagaggaagtttgcggaggtcccacgcgactctgtgaagctgatg
gcggagagtgtgggggtggagctcagtgatgacatcgccgccatgctcgctgaggacgtg
tgttaccggctcagggaggcggcacagaacagctcccagttcatgaggcacgctaagcga
cgcaggctgacagtggaggatttcaacagagctctgcgctggagcaatgtggaggcagtg
tgtgggtacggttctcaggatgcgctgcccttccgacccctcaaggagggtgagctgtac
ttcgtggaggatcgagagatcaacctggtggagctggctctggccaccaacatccccaag
ggctgtgcagagaccatggtgcgagttcaagtttcctatttggatgggaaagggaacgtg
gaaccccaaggcgcagtgcccacggcagtgcagtctctgacggacgacctcctcaagtat
taccagcaggtcaccagggccatactgggagaagaccagcagctcatgaaggttgcatta
caggatcttcagacaaactccaaaatcgcagctctgctcccttactttgtgcacgttgtc
agtggggtgaagtccgtgagccacgacctggagcagctgagccgcttgctgcacatggtg
aagagcctggtgcagaaccccttcctatacctgggctcctacatcaagagcctggtgtcc
agcgtcatgtactgcatcctggagccgctcgccgcctccatcaacccgctcaacgaccac
tggaccctgcgtgactatgccgccttgctgctcagccacatcttctgggctcacggggac
ctggtcggggggctgtatcaccagatcctgctctcacttcagaaggtgctgtcagacccg
gtgcggccactgtgctctcactacggtgctgtggtggggctgcacgcgctgggctggaag
gcagtggagcgggttctgtttcctcacctctcagcgtactggtctaacctgcaggcagtg
ctcgatgacgactccgtctccaacgctcaggtcaaagctgacgggcacaaagtctacgga
gccatcctggtggcggtagagaagctgctgaagatgaaggcgcagtcccggagtgtgcca
gcggagggcagtgtggctgtcagggagaggtccttccctgggctcagccctccccaggag
ccggtctccgagcctggcttcggcatcgcctcccacctgctgcagggcgcggccggcgtg
cccgcggaggagccggtgcccgtgccgctgcccgtcatgtaccgcgagctctacgccttc
ttcggggacagcctagccgtgcgcttcagcaccggtccgggcatcgaacccagagccagc
cgcgcagcaccccaccagccccccgacagcaagaaagaggggatggggcccgacactacc
aggaagatgccccagctcaccgccagcatgaccatcagcccccggcaggacagcagcccc
aagaacgagcccagcctgccggcagtgcagaacagctctgctgccccctccaggttccag
cgctcgtcctcctcctctctccagagatccaagccccccccctccaaggctgctcagcgc
tccgcagggcccccccgtgaggtcttccagaagagccgcttccccctgccccctgccacg
gcacccttctccttcctcatagcgggcaggcagaccggccggcgctgccagggccggcgc
ttccagaccagcttcccccagctgcacccccccaacccctctgcacagcccccccgtggg
tacgcacacaagctgcccgtcatcggacgcatgggcaagcccatcaagaggtgggtgtgc
tcccagtactccctgcacctgcctctgtga
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integrated database retrieval system
