Acipenser ruthenus (sterlet): 117398659
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Entry
117398659 CDS
T07327
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K09095
hypoxia-inducible factor 2 alpha
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117398659
04131 Membrane trafficking [BR:
arut04131
]
117398659
Transcription factors [BR:
arut03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117398659
Membrane trafficking [BR:
arut04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117398659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
GxGYxYP_C
Motif
Other DBs
NCBI-GeneID:
117398659
NCBI-ProteinID:
XP_034771207
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Position
55:complement(1419964..1444435)
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AA seq
797 aa
AA seq
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MSERTGKKRVCSERRREKSRAAAQSRRGRESEMFTELAMQLPLPHSTALHLDKASIVRLT
LSYLRLRALLDTAGAGDRKVDSEDRDTVPGASIEGFLLLISQSGHIVYTSEAVASHVGIH
QMELIGQSVFEFIHPCDQDEMNEALNSKQEPSVAGRRRNCDFFLRMKCTLTNQGRTVNLK
SASWKVLHCTGHMKLPCPSQTPYGTPKGCLVLLCEPVPVPSSSDCSLNPNTFLTRHSMDM
SFTYCHPRVKDLLGYEDGELLGRSVYEFYHAVDTDHVRRTHHSLLSKGQSSTGLYRLLAK
RGGYVWVQTDAAVIYDSRSGQPQSVICVNYILSGQEESEVIFSLEQTKSLLKPRPSVATA
TPDDTHLLFTELWEEPDELARLAPKPGDDIIALDFESSDRELERFDVLPVYWAPLGYGAE
RCGTQTPSPTPFRGYTNQGSCETSTESCEVTSFSDSKPPEENPHSQPVLLIEPMFEPREQ
NQDKSQEDLSKLDLETLAPYIPMDDEDFQLTPISEGAEEWGSGQGEVGEASCFTLPSLEL
REERYTAPTFQGTNLPKHPSFGSPLCPQVPPRSQQRGVLWPSDPPFSRAINGTPQRPNWL
QQTPCSARTSTNITLQETRNTLEEYFHGNSCRVNGTLSLSNSLKRRPQSSVFQSSQSNTE
CTCEHLGEPIHWKRIKLPLRTNQNTACIPQTEGDACWWSSGQTPCHWQTDQRGTVPWGPW
AGAATAGTADHCSATQPPDPTPWKTELSSCLLSSPADRSVLPVLTRWECEVNAPLTAASR
LLHGSEILRVLDQLCPD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagaacaggcaagaaaagggtgtgctcggagaggcggagagagaagtcccgg
gccgcggcgcagagccggagaggcagggagagcgagatgttcacagagctggcaatgcag
ctgcccctgccccacagcactgccctccacctggacaaggcgtccatcgtgagactgacc
ctgagctacctgcgactgcgagccctgctggacacagcaggtgcaggtgaccgcaaggtg
gacagtgaggacagagacacagtccctggggcgtcgatagaggggttcctgctgctcatc
tcccagagcggccacatcgtgtacacctccgaggccgtggccagccacgtgggcatccac
cagatggagcttatcgggcagagtgtttttgagttcatccacccctgtgaccaggacgaa
atgaacgaggctctgaactctaagcaagagccctcagtggcggggagaaggcggaactgt
gacttcttcctgagaatgaagtgcactctgaccaatcagggccgcactgtcaacctcaaa
tcagcttcctggaaagtcctgcactgcacaggccacatgaagctgccctgcccctcacag
accccctacgggacccccaagggctgcctggtcctgctttgtgagcccgtgccggtcccc
agcagcagcgactgcagcctgaaccccaacaccttcctgactcgacacagcatggacatg
agcttcacctactgccaccccagggtgaaggatttgctgggttatgaggatggtgagctg
ctgggacgctcagtgtacgagttctaccacgctgtggacacggaccatgtcaggaggact
catcacagcctgctcagtaaaggccagtcctccaccggtctctaccgtctcctggccaaa
aggggcggctacgtgtgggtgcagaccgacgcagcggtcatctacgacagccggagcggt
cagccacagagcgtgatctgtgtcaactacatcctgagtggtcaggaggaatcagaggtg
attttctcattggagcagacaaagtctcttctcaagccccgcccctccgtcgccacggca
acacccgacgacacccacctgctcttcaccgagctgtgggaggagcccgatgagctggca
cgactggcacccaagcctggcgatgacatcatagcgctggacttcgagagcagcgacagg
gagttggagcggtttgatgtcctcccggtctactgggctcccctggggtacggggcagag
cgctgtgggacacagaccccctccccaacccccttcagggggtacaccaaccaggggtcc
tgcgagacgtcaacagaaagctgcgaggtcacttccttttctgattccaaacccccagag
gagaacccacacagccagccggtcctgctgatagaacccatgtttgagccgagggagcag
aaccaggataagagccaggaggacttgagtaagctggacttggagaccctggctccatat
atccctatggacgatgaagacttccagctgacccccatcagtgagggggcagaggagtgg
ggttcggggcagggggaggtgggggaggccagctgcttcactctcccctccctggagctg
agagaagagcggtacacagcccccacctttcaggggaccaacctacccaaacaccccagt
ttcgggagccccctctgcccccaggttccccccagaagtcagcagcgaggggtgctgtgg
ccctctgacccccctttcagcagggccatcaatgggaccccccagcgcccaaactggctt
cagcagaccccctgttctgcaaggacctctacaaatatcacactacaagaaaccaggaac
acattggaggagtacttccatggaaacagttgtcgggtgaacggaacactcagccttagc
aacagcctgaagaggagaccgcagagttctgtgttccagtccagccagtcgaacacagag
tgcacttgtgaacatctgggggaaccaatccactggaagagaatcaaactccctctgagg
accaatcaaaacaccgcctgcattccacagacggagggagacgcctgctggtggagctca
ggtcagaccccttgtcattggcagacagatcagagaggcaccgtgccctgggggccgtgg
gcaggagcagctacagcgggcacggctgaccactgcagtgccacccagccaccagacccc
actccctggaaaacagagctgtcctcctgtctgctgtccagtcctgctgaccgctctgtg
ctgccggtgttgacccgctgggagtgcgaggtcaacgcccctctgaccgctgcgtcccgc
ctgctgcacgggtccgagatcctcagagtgctggaccagctgtgtccagactga
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