Acipenser ruthenus (sterlet): 117398670
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Entry
117398670 CDS
T07327
Name
(RefSeq) latent-transforming growth factor beta-binding protein 3 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arut04990
]
117398670
Domain-containing proteins not elsewhere classified [BR:
arut04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117398670
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
Plasmod_Pvs28
FXa_inhibition
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
117398670
NCBI-ProteinID:
XP_033853596
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All DBs
Position
54:complement(2572866..2627612)
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AA seq
1292 aa
AA seq
DB search
MVSLIVHLLFLWLSVQGLVLAAERSAARERFKVVIAPLICKRTCLKGQCRDTCEQGNNTT
LIGENGHSGDTLTGPGFRVVVCPLTCMNGGQCSSRSHCLCPPEFSGRFCQYSRQPHGGGG
AKGEQAASKHPVYTLHLLPDPQSPGEPPGAGRPLAQTHSSFTVPLGPSAGASQHSSEVQV
QHPVVNVRVHHSPETSVQIYRIDEAEGGQGKNPQPSNKPPHRGQPRLSPQTQKPRGRCFQ
ETVPKQACSSNPLPGLTNQEDCCGSVGNSWGQNKCHKCPKLQYTGVQKTGPILGEFGPNC
PQGYKRLNATHCQDINECRMQGVCQDGECLNTQGSFRCACKPGFVLERTRCVGAEQLEEK
GPCYRTVQSDQCDHPLSGHLNKQLCCCSVGAAWGKDCERCPKDGTDAFKEICPAGKGFSY
YSSHDLSVQIYPDGSAHIYHKSKTLGSVDQEIVIPPLPDMEDLSEEREVMTLAQFTSVTT
IGSRYPEVVARPTSPAVLKVPPEQHTKSAVEIAPTQITEVDACKLNRNICGHGECINGQA
GFFCHCNTGYRPHAISKYCVDMNECELEPCGSGRGLCMNTGGSYTCRCNSGFRLQIHQGK
RTCVDVNECAKPKICGDGGRCVNQPGFYKCDCYPGYKSKSPRHPICEDIDECLDPNMCPN
ERCENRPGSHDCIPCPPGHRGQAQVCYDIDECQGRGVCPNGRCENLQGSYRCVCDEGFTS
KSNSKACRDINECEDDRLCANGHCVNTEGSFQCQCYPGFQLTQEGSHCEDTDECAVPSNC
VGGHCINKMGSYSCKCQKGFQLLNGRRCQDIDECAQDHSLCQPNGACVNVDGDYLCVCNE
GYLNSEDKHSCEEIEVDSDDKKECYLNLDDTVFCDSVLATNITKQECCCSSIGSGWGDHC
EIYPCPVHNSAEFYSLCPAGKGFYHAENLLEYGMPVHIDIDECALFGNEICKEGRCVNTQ
PDYECYCQQGFYYDGNLLECIDVDECHDESNCQNGRCVNTRGSFYCSCTPPWTADTSNKK
CVPPATVDVDECQDPANCKNGRCVNTPGSYYCICPLPWALAPDRNTCTPPEEQGDVDECQ
DPSYCKKGLCVNTLGSFHCICELPLTFSAALKQCVFDDRTAAHKDVCFQYVGLDHMCSAP
HNGPPVTYSDCCCHIGRGWGPECRTCPPRHSDIFSRLCAMDTDSYGERESFSLADYKNEG
DSSEEDSDECACPNGRCVRSYLGTACECNTGFRLHHSRTRCVDIDECAELNKRGSLCKNS
HCINTSGSYKCFCKPGFIPARRPNICMRSRTQ
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggtttccttgattgtccatctcctgtttctctggctctcagtccaggggctggtgtta
gcggccgagcgctcggcagccagggagcgattcaaagtggtcatcgccccactcatctgc
aagcggacctgtctgaaaggacagtgtcgagacacctgtgaacagggcaacaacacgacc
ctcatcggggagaatggccattcaggagacaccctcaccgggccagggtttcgagtcgtg
gtgtgccctctcacctgcatgaacggaggccagtgcagctcccgcagtcactgcctgtgt
cccccggagttcagcggacgcttctgccagtacagtcggcagccccacggagggggaggt
gcgaagggagagcaggcagccagtaagcaccctgtctacaccctgcacctgctcccagac
ccccagagccctggggagccccccggggcaggcaggccactcgctcagacccactccagc
ttcactgtacccctggggcccagcgcaggggccagccagcactcctcggaagtacaggtc
cagcaccctgtggtcaatgtgcgggttcaccactcccccgagacctcagttcagatctat
cgcatcgacgaagccgaaggggggcagggcaagaacccgcagcctagcaacaagcccccc
caccgcgggcagccccgcctctctccacagactcagaaacctcgcggccgctgtttccag
gagaccgtgccgaagcaggcatgcagcagtaaccctctccccgggctgaccaatcaggag
gactgctgtggcagtgtggggaactcctgggggcagaacaagtgccacaagtgtcccaaa
ctgcagtacactggtgtccaaaagacgggacccatcctgggtgagtttgggcccaactgt
cctcaaggatacaagagactgaacgctacgcattgccaagacatcaacgagtgcagaatg
cagggggtgtgtcaggatggagagtgtttgaacacacagggcagcttccgctgtgcttgc
aagcctggctttgtgctggagcgcactcgctgtgtgggcgcagagcagctggaggagaag
ggtccatgttatcggacggtgcagtcagaccagtgtgaccacccgctctccggccatctt
aacaaacagctgtgctgctgcagtgtgggggcggcctggggcaaggactgcgagaggtgc
cctaaggatgggacagatgccttcaaggagatctgccctgctgggaaaggcttcagctac
tactcgtcccacgacctgtcagtgcagatttaccctgacggcagtgcccacatttaccac
aaatccaaaacactggggtccgtggaccaggagattgttataccaccgctccctgacatg
gaagacctttctgaggagcgtgaggtcatgaccctggctcagttcaccagtgtcaccacc
atcggctcacgctacccagaggtggtagccagacccacatcccccgctgtgttgaaggta
cctcccgaacagcatacaaagagtgcagtggagattgcaccaactcaaattacagaggtg
gacgcctgcaagctaaacaggaatatctgtgggcatggcgagtgtattaatggacaggca
ggattcttctgccactgcaacactggctaccggcctcatgccatcagcaaatactgcgtg
gatatgaacgagtgtgagctggagccgtgtggcagtgggcgtggcctgtgcatgaacaca
ggcggttcctacacgtgtcgctgcaacagcgggttccggctgcagatccaccaaggcaag
cgaacatgcgtggatgtcaatgagtgcgccaaacccaagatctgtggcgatggggggcgc
tgtgtgaaccagcccgggttctacaagtgtgactgttaccccggttacaagagcaagtct
cctcgccaccccatctgtgaagatattgacgagtgtctggaccccaatatgtgcccgaac
gagcgctgtgagaaccgacccgggtcccacgactgtatcccctgcccccctgggcaccgt
ggccaggctcaagtctgctacgacattgacgagtgccagggccggggtgtgtgtccgaac
ggccgctgtgagaacctgcagggctcctaccggtgtgtgtgtgacgagggcttcacttcc
aaatccaacagcaaggcctgtcgagatatcaatgagtgtgaggatgatcgcctgtgtgcc
aacgggcactgtgtgaatacggagggatcctttcagtgccagtgttacccaggattccag
ctgacacaggagggcagccactgtgaagacactgatgagtgtgcagtgccctctaactgt
gtgggagggcactgcatcaacaagatgggctcctactcatgcaagtgtcagaaagggttc
cagctcctcaatggacgcaggtgccaggacattgatgagtgtgcccaggatcacagcctg
tgccagcccaatggagcgtgtgtgaatgtggacggagactatctctgcgtctgcaatgag
ggctacctcaactctgaggacaagcacagctgtgaagagatcgaggtggactctgatgat
aagaaggagtgctatctgaacctcgatgacaccgtgttctgtgacagtgtcctggccacc
aacatcaccaagcaggagtgctgctgctcgtccataggctccggctggggggaccactgc
gagatctacccctgcccagtgcacaactcagctgaattctactctctctgccccgctgga
aaggggttctaccacgcggagaaccttctggaatacggaatgcctgttcacatagatatc
gatgagtgcgctttgtttggaaatgagatctgtaaagagggccgttgtgtcaacacacag
ccagactacgagtgttactgccaacaaggattctactatgatggcaatctcctggagtgc
atagatgttgacgagtgtcacgatgaatcgaactgtcagaacgggcgctgtgtgaacacc
cgcgggtccttctactgcagctgcacccccccctggactgccgacacatccaataagaag
tgcgtccctccagcaacagtggatgtggatgagtgtcaggacccagcaaactgtaaaaac
gggcgctgtgtgaacacacccggctcctactattgcatctgccccctgccctgggctctc
gcccccgaccgcaacacctgcacccccccagaggagcaaggagatgtggatgagtgtcag
gacccatcgtactgtaagaagggcttgtgtgtcaataccctgggctccttccactgtatc
tgcgagctgccactcactttcagcgccgcgctcaagcagtgcgtctttgatgatcgcaca
gctgcacacaaggacgtctgcttccaatacgtggggctggatcacatgtgcagcgcgcct
cacaatggacccccggtcacctactcggactgctgctgtcacatcggccgtggctggggc
ccggagtgccgaacctgccccccacggcactcagatattttcagtcgcttgtgcgccatg
gatacagactcttacggagaaagagagtccttctctttagcagactacaaaaatgaagga
gacagttcggaggaggattctgatgagtgtgcctgtccgaatggccgctgtgtgcgctcc
tatctggggacggcctgtgagtgcaacacaggcttccggcttcaccacagcaggacccgc
tgtgtggacattgacgaatgtgccgagctgaataaacgtggctcattgtgtaagaactct
cactgcatcaataccagcggctcctacaagtgcttctgcaaacccggcttcatcccggct
cggagacccaacatctgcatgcgctcacggacacaatag
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