Acipenser ruthenus (sterlet): 117399365
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Entry
117399365 CDS
T07327
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117399365
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
PDZ_6
LRR_14
LRR_4
PDZ_2
LRR_LRWD1
LRR_9
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
117399365
NCBI-ProteinID:
XP_033854357
LinkDB
All DBs
Position
3:complement(87155556..87309046)
Genome browser
AA seq
2006 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQTVPEEIYRYNRSLEELLLDANQLRDLPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPISRL
PDGFTQLRSLAHLALNDVSLQALPSDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELDILPDTLGALPNLRELWLDRNQLYSLPLELGNLRRLVCLDVSENKLDQLPKELS
GLVALTDLLLSQNLLETIPDGIGCLKQLSILKVDQNRLTHLTDSIGECENLTELMLTENL
LTMLPRSVGKLKKLTNLNVDRNRLTSLPVELGGCSSLNVLSMRDNQVTKLPAELANATEL
HVLDVAGNRLLNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDTNLNRVSVIQFQEEAKTEEEDKEAAAERRGLQRRATPHPSEL
KVMKKVIEDRRNEAYTANPDGGLESPDIEEKRLSALSNQSHDSHASNSTASAGSESYEFV
EHERRGHIVAMATDGAEPVEEEEGLDDEMEVEYIEPTVHFAEEPIIRGGEEDDDEEDEDG
EEERPSLPMEKQRLIRKDTPHYKKHFKITKLPKAETVAALLQGLSVEGVDQHEFRTPQHC
AQEEGQEGEQEEEEEEEEEEEEEEGVEVEGRLSDRTNAALQPFKGVSFDQVNNLLIEPAR
IEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARSGVKVGDKLL
EVNGVDLQGAEHHMAVEALRSSGTEVTMSVLRERMVEPENAITTTPLRPEDDYFPRERRS
GLPFPSDEEPERGLQERLSTCLFRNDKGLGFSIAGGKGSTPYRTGDTAIFISRIAEGGSA
HRDGILHVGDRVISINGVDMTEARHDQAVALLTGTSPTITLDVERDVSDGVAALGGSPAL
QRVRPHSPPPPTPSENNGQEDASEDSPQDRPLNSRALEDEYPIEEVYLVKAGGPLGLSIV
GGSDHASHPFGISEPGVFISKVISQGLAAQNGLQVGDRILEVNDIDLRHATHQEAVRALL
SNKQEIRMLVRRDPPPPGMQDILIEKLPGEKLGISIRGGAKGHAGNPIDPSDEGIFISKM
SLSGAAARDGRVKVGMRILEVNNHSLLGMTHTEAVRILRSIGDTLAMLVCDGFDPKDAGS
VEASPGVITNPFATGIGRKNSMESISSIDRDLSPEEMEIIQKEMEMVRESTQWEKEELEK
VEQMRREREEANRLLEEEAESFSTGPLKLDYKTLAALPNASVQKVSRLYPCGTHSVTMET
PKPANNSTLDLLVFRNGELTGQGQGDCLRSLFQTEPQILNPAALPLSIPCQSTGVEAKPV
QSNPDPQVTFATKKTVEVSHNPLQQSPREKQEAPPQEGEEEESLVDSQPISFSSNPFLIA
NQKGKGKPTEAQILSGPPVGYGKQGLLQTSLYLKGSSAEPIGLNSTSWEAPCYPTSQPPM
STAASCTGRETRFASINFLSTTSPKEVSDVFIQRNTVQSKPSPEQDLDNVFASDSDVELG
GDPPCGIVGQPFATRNLSTDVLSPLGEWTLRREYLSLSAVPLVTKPSLDLEVASPSPSGQ
DSPEQRSFRDRQKYFEIDVKQHLPDSKPKPRVSLVAEDDLKKMREEEVRRVEQRARELLV
DEEEEEEEDLDKQMAEMKAHGKVVIEGVEYKIERVDNRSTNSPSAGESLVHGKGESQRNS
LEDGFRPEQRPNSMTGLSPMYPGESGAPIRTAKAERRYQERMRMQSPEVHNAQDKDLSPA
EKRALEAEKRAMWRAARPRGLEDDIKQYEQDLAKKLYQSRQRASQAHSKSPDPAASEHRM
KSLEQDALKAQMVIAKSKEGKKRSPLDQLAESPSPAPTPSPTPLEDYSPRSVTSPGRLSQ
TEKKFDYRQFAAIPSSKPVYDIQSPDLTDGIQLLDDTTNSAEPRGEKDAEGHVCLPTTSA
QEEMALFSNKRKLRHSRLSLETAVPT
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtgtatccctctgtggcgctgtaaccgccacgtcgagtccgtcgacaagcgg
cactgctccctgcagactgtgccggaggagatctaccgctacaacaggagtcttgaagaa
ctgctgttggatgccaaccagctgagggacctgcccaagcctttctttcgcctgctgaac
ctgcggaagctgggcctcagcgacaatgagattcagagactccctcccgaggtggcaaac
ttcatgcagctggtcgagctggacatctccaggaacgacattccagagatcccagagagc
attaaattctgtaaatcgttagaaattgcagacttcagtggaaaccccatttcaaggctg
cccgacgggttcacacagctccgcagcctcgcgcacctcgccctcaatgacgtctccctg
caagcactgcccagcgacatcggcaatttggcaaaccttgtaacactggaacttcgagaa
aacctgctaaaatccctgcctacatctctgtcattcctggtgaagctggaacagttggac
cttggcagcaatgaactggacattttgccggatactttgggagcgctgccaaacctgcgg
gagctgtggctggacaggaaccagctgtattcactgccactggagctaggtaacctgcgt
cggctggtgtgtctggacgtgtcggagaacaagctggatcagctacccaaggagctgagc
ggcctggtggcactgacagacctgctgctgtcccagaacctgcttgaaaccatccccgac
ggcattgggtgcctgaaacagctctctatcctgaaggtagatcagaaccgactgacccac
ctgacagactcgataggagagtgtgaaaacctcactgagctcatgttgactgagaacctc
ctcacgatgctgccacggtctgtagggaagctgaagaagctgacgaacctgaatgtggac
cggaaccggctgacctccctgcccgtggagctgggtggctgctccagtttgaacgtgctc
tccatgcgagacaaccaggtcaccaagctgccggccgagctggcaaacgccacggagctg
cacgtgctggacgtggccgggaacaggcttctgaacctgccctttgccctgaccaacctc
aacctgaaggccatgtggttggcagagaaccagtcccagcccatgctcaagttccagaca
gaagatgacgagaagactggggagaaggtgctgacctgttacctcctgccacagcagccc
tctcccagcctcgagaacctcctgcagaacagtgttgatgacagctggacggacaccaac
ctgaaccgtgtcagtgtgatccagttccaagaggaggccaagactgaggaggaggacaag
gaggctgcggccgagagaagggggctgcagcgacgagcgactccccaccccagcgagttg
aaagtaatgaagaaggtgatcgaggaccgcaggaacgaggcctacaccgccaacccagat
gggggactcgagtctccagacattgaggagaagaggctgagcgcactgtcaaatcagagc
cacgactcccatgcttccaacagcacggcgtcggctgggtctgagagctatgagtttgta
gaacacgagaggcggggtcacatcgttgccatggcaacagatggggcagagccggtggag
gaggaggaggggcttgatgatgagatggaggtagagtacattgagccgacagtgcacttt
gctgaggagcccattatccgcggaggagaggaggatgacgatgaggaagatgaggatggg
gaggaggagcgtccgtccctccccatggagaagcagcggctcatccgtaaggacacaccg
cactacaagaagcacttcaagatcaccaagctgcccaaggccgagactgtggcggcgctg
cttcaagggctgagtgtggaaggggtggaccagcatgagttccggactccacagcactgt
gcccaggaggaggggcaggaaggagaacaagaggaggaggaggaggaggaggaggaggag
gaggaggaggagggggtagaagtggagggcagactgagcgataggaccaatgcagcactg
cagccgttcaagggggtgtcgtttgatcaagtcaataatctgctgattgagcctgctcga
attgaggaggaagagctgacactaacgatactccgtcagactgggggtttagggatcagt
attgctggggggaaaggctccacaccctacaagggagatgatgagggtatctttatctca
agagtatccgaggaaggtccggctgcacgttcaggagtaaaagtgggagataaattatta
gaggtgaatggcgtggacctgcaaggtgcagagcaccacatggcagtggaggctctgcgc
agctctggcacggaggtgaccatgtcagtgctgcgggagcgcatggtggagccagagaat
gccatcaccaccacgccactgcggcccgaggatgactatttcccccgtgaacgccgcagc
ggtctacccttccccagcgacgaggagcctgagcgcgggcttcaggagcgcctctccacc
tgcctcttccgcaacgacaaggggttgggcttcagcatcgcagggggcaaggggtccact
ccataccgcactggagacacggccatcttcatctcccggattgcggaggggggttctgcc
catcgagacgggattcttcatgttggagacagggttatttctatcaatggtgtagacatg
acagaagccaggcatgatcaggcagtagctcttcttaccggcacatcccccaccatcacc
ctggatgtcgagcgggatgtctctgacggtgtcgcagcactaggggggtctcctgccctg
cagcgggtacgcccccactccccgcctcctcccaccccctcagagaacaacggccaggag
gacgcaagtgaagactctccgcaggaccgcccgctgaacagcagagctctggaggacgag
taccccatcgaggaagtgtacctggtgaaggcaggcggccctctagggctgagcattgtg
ggaggcagcgatcatgccagccatccctttggaatcagtgagccaggtgtattcatctca
aaggtgatctcccagggcttggctgctcagaatgggctgcaggtgggtgacaggatccta
gaggtgaacgacatcgacctgcgccatgccacgcaccaggaggccgtccgggcactgctc
tcaaacaagcaagagatccgcatgctggtgcgcagggaccctcccccgccgggcatgcag
gacattttaattgagaagctcccgggggagaagctggggatcagtatccgaggcggagcc
aagggccacgctgggaaccccattgacccttctgacgagggcatcttcatctccaagatg
agcttgagtggtgcggcagcccgggatggcagggtcaaagtggggatgcgaatcctggag
gtgaacaaccacagcctgctgggaatgacgcacactgaggcagtgcgtatcctgcgcagc
atcggagacacgctggccatgctggtgtgcgacggcttcgaccccaaagacgctggcagc
gtcgaggcatcccctggtgtcatcactaacccctttgccactggcattggtcggaagaac
agcatggaaagtatctcctccatcgacagggacctcagcccagaggaaatggagatcata
cagaaggaaatggagatggtgcgggagtctacgcagtgggagaaagaggagttggagaaa
gtggagcaaatgcgcagggagcgtgaggaggccaaccgcctgctggaggaggaggctgag
agtttcagcacagggcctctaaaattggactacaagactcttgcagcccttcccaacgcc
agcgtacagaaagtgagcaggctttatccttgtggtacgcattctgtaacaatggagaca
cccaagccagccaacaactctactctagacctgctcgtgtttagaaatggggagctcact
ggtcaggggcagggggactgtctgaggagtctgtttcaaactgagcctcaaatcctgaat
ccagccgccctgcctctcagcatcccatgccagagcacaggagtggaagccaagccagtc
cagagtaacccagatcctcaggtcacgtttgccactaaaaagactgtggaagtttcccac
aatcccctgcaacagtcccccagagagaaacaggaagccccgccacaagagggggaagag
gaagaaagcctggtggactcgcagcccatttcgttcagcagtaacccctttctcatagcc
aatcagaaggggaaaggcaagcccaccgaagctcagattctttcgggaccgccagtcggc
tacggaaagcagggtctgttgcagaccagcctgtacttaaagggttcctctgccgagcct
attggtttgaacagcaccagttgggaagctccctgctaccccacctcgcagcctcctatg
tccaccgctgcttcttgcactggacgggagacccgctttgcatctattaatttcctctcc
accacaagtcccaaggaagtatcagatgtctttatccagaggaatactgtccagtccaag
ccttcacctgagcaggacctggacaatgtttttgccagtgacagtgatgtggagctggga
ggggaccctccatgtggcatagttggtcagccctttgccacccgtaacctctcaacagac
gtgctcagccccctgggcgagtggaccctgcgtagggagtacctgagcttgtccgcagtg
cccctcgtcaccaagccctcactagaccttgaggtcgcgtccccgtcacccagtgggcag
gacagcccggagcaacgctcgttcagagaccggcagaagtactttgagattgatgtgaag
cagcacctacccgacagcaagcccaaacctcgtgtctcgctggttgctgaggatgacctc
aagaagatgagggaggaagaagtccggagggttgaacagcgggcccgggagctgctagtg
gatgaggaggaagaggaagaggaggaccttgacaagcagatggcggagatgaaggcccat
ggcaaagtggtcatcgagggagtggagtacaagatagagagggtggacaaccggagcacc
aactcccccagcgcaggtgagtccctggtgcatgggaaaggagaatcccagaggaactcc
ctcgaagatggcttcagacccgaacagagaccaaactccatgactggactgagcccaatg
tacccaggggagtcaggagccccaatcaggactgccaaggcagagcggcgctaccaggag
cgaatgcgcatgcagagcccagaagtgcacaacgcccaagacaaggacctctccccagct
gagaagagagccctggaggcagagaaacgggccatgtggagagcagccagacccagaggg
ctggaggatgatattaaacagtacgagcaggatctggctaaaaagctgtaccagtcaaga
cagagggcatctcaagcccacagcaagagccctgacccagcggccagcgaacacaggatg
aagtccctggagcaggatgctctgaaggctcagatggtaatcgccaagtccaaggagggg
aagaagaggagcccactggaccagctggcagagtccccctccccggcccccacgccctcc
cccacaccgctcgaagattacagccccagaagtgtgacgtcaccagggagattgtcccag
acagaaaagaagtttgactaccgacagtttgcagctattccttcttctaaacctgtatac
gacatccagtcccctgacctgacagatggtattcagctattggatgacactaccaacagt
gcggagccccgtggggagaaggatgctgaaggccatgtctgcctacccaccacctcagca
caggaagaaatggcactcttcagcaacaagcgcaaactacggcacagtcgtctgagcctg
gagacagctgtccccacgtag
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integrated database retrieval system