KEGG   Acipenser ruthenus (sterlet): 117399433
Entry
117399433         CDS       T07327                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117399433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arut03041]
    117399433
Spliceosome [BR:arut03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117399433
 Complex B
    117399433
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 117399433
NCBI-ProteinID: XP_033854465
LinkDB
Position
3:complement(87314119..87330472)
AA seq 539 aa
MAVSVNVGGEALMMKNGQSTVPKLGLPLLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTVRQAFA
HFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARSFNRIYVASVHPDLSDEDIKSVFEAFGKIKSCMLVRDPTTGKHKGYG
FIEYEKSQSSQDAVSSMNRFDLGGQLLCVGKAVTPANALLAPMTPGGLPPAAAVAAAAAT
AKITAQEAVAGTSALNALTTPTLTLGQTLGQTLGQTFGQSLGQPLGALPQAMMAAQALGV
FSGVNQMQPLLPVIPQVGLVNPVLSTPPALAAAAKAKKEKEEEVGVDGERTEMLSEQEHM
SISGSSARHMVMQKLMRKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQ
EKQGEEEDAEVIVKIFVEFSTATEMDKGIEALNGRWFGGRKVIAEVYDEERFNNSDLSA
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcggtgtcagtgaatgtgggtggtgaagctctgatgatgaagaatggacagagcaca
gtgccaaagcttggcctccctctgctcacaccggagcagcaggaggcgctacagaaggca
aagaagtatgcaatggagcagagcatcaagagtgtgctggtgaagcagaccattgctcac
cagcagcaacagctaactaacctccagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcgatggcagcccagcggcagcgtgcgctagccatcatgtgtcga
gtttacgtgggctcaatttactatgagttgggggaggacactgtccgacaagcttttgct
cattttggacccatcaaaagcatagatatgtcctgggactcggtcaccatgaaacacaag
ggatttgcctttgtggagtatgaagtcccagaggcagcacagcttgctctggaacagatg
aactcggtcatgctgggaggcagaaacatcaaggtgggcagaccaagtaatattggccag
gctcagcccatcattgaccagctagcagaagaggcacggtcctttaaccggatctacgtg
gcatccgtacatccagacctgtctgatgaggacatcaagagtgtctttgaggcttttggg
aaaatcaaatcctgcatgctagtcagagaccccactacaggcaaacataaaggttacggc
tttattgaatatgaaaagtctcagtcgtctcaggatgctgtgtcttccatgaaccgtttt
gatctgggaggtcagttactgtgtgtcggtaaagcggtcactccggccaatgcacttctg
gcccccatgacccctggtggcttaccgcctgctgcagcagtggcagcggcagcagcgaca
gccaagatcacagcgcaggaagcagtagctggaacctcggcactgaacgcgctcacaact
ccaacactgacgctgggacagacactgggacagacattgggacaaacgtttggacagtca
ttgggacagccactgggggctctaccccaggcaatgatggcagcacaagcactgggcgtc
ttctcaggtgtgaaccaaatgcagccactccttccagtgatcccacaggttggtttagtg
aacccggtcctgtccacccctccagcgctagcggccgccgcaaaggccaagaaggagaaa
gaggaagaggtgggagtggatggggagcggacagagatgctgagcgaacaggagcacatg
agcatctccggcagtagtgctagacatatggtcatgcagaaactgatgaggaaacaggag
tcgacggtgatggtgcttcggaacatggttggtcccgaggacattgatgatgaccttgag
ggcgaggtgacggaggagtgtgggaagtttggggcagtgaaccgcgtgatcatctaccag
gagaagcagggggaggaggaggacgccgaggtgatcgtcaagatatttgtagagttctca
acggcaaccgagatggacaaaggcatcgaggcgctgaatgggcgctggtttggaggcagg
aaagtcatcgctgaggtgtacgacgaggaacgcttcaacaacagtgacctgtctgcttaa

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