Acipenser ruthenus (sterlet): 117399451
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Entry
117399451 CDS
T07327
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117399451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arut03032
]
117399451
03400 DNA repair and recombination proteins [BR:
arut03400
]
117399451
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
117399451
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
117399451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
117399451
NCBI-ProteinID:
XP_034776553
LinkDB
All DBs
Position
3:complement(41773585..41800543)
Genome browser
AA seq
1551 aa
AA seq
DB search
MSKMDRDPFFVKFVQNLEQSSDLATKAYDAIRELQSEEFLQTVDEEAALLLQQKDKSLYI
FSSFNGPAFIHLKKLGCRIVSPLVVLFCLQHQRSVPKAEHPVYNMSMADVTVSCTSLEKE
TREEVSTLVQLMGGRVFRDLNVSVTHLIAGEVGSKKYVVAANLGRPILLPSWVKACWEKS
QDSLFRYTDLNTDEYLCPIFRGCTICVTGLNNLNRKEVQRLTIEHGGQYTGQLKMNECTH
LIVQEPKGQKYECARKWNVYCVSIHWLFSSIEKRFCQDESMYMVEPTMDREQAPNTSTPT
GCEKKQDVSSASLLLGVSQISNISMSCINESAFNTITASRLEPSGDNLEMLDISVFNAQD
DLLDGCKIYLCGFGGKKLDKLRRLINSGGGLRFNQLSEDVTHIIMGEKDEEVNQFLSKAS
HRPHIVTVKWLLESFSKGCLLPEEKYFHSDYLPPAPSAVEPPVRKSAPQRRNTSVEMKTA
VAVSPGREQRKDDDLLSQYMEEDKTVVEAGDRSCDDATHVTMLETDPSSNTMLEEAATVL
EEGGLFSGKRFLIAGFSGEDEACLAELIKEHAGKVLGARSRAIADYAVVPLLGCEVESTV
GDVVTNTWLAMCIEQQILLDLQMNPMFTPVAVVEGSTPLKDCVLSVSQFIGVERDSLVYL
AELLGARVQEFFVRKANQRKGMLASTHLVLKEPEGSKYEAAKKWNMPAVTMRWVLDSAHT
GRRAEEDRFLVENAGSPENEESCYIGGSQKQEKPSMSMRSPEIPMAQLNTLKNTVVTPLD
MNRFQSKAFQSVISRPDGGKVTPGIECRALQREASLQLDTPSRFLCRDQLFKPSFDVKDA
LAALETPGGPRQHRRKMSTPLSEVIGRNMKVALANSTRNNMAAVTASPQLATPEPQQVEE
KPTPLAGVIICVSKKLIKKQSELNATAASLGADYRWSYDETVTHFIYQGRQNDTSREYKA
VKERDVHIVSQHWLQACAEEQRLVPESLYPFTYNPKMSLNLSQVQDRRLSTPRSPPSIPY
CNNLEQDCEQDKSHVPLDKNEELTEETRNHHEERNPEETNLENLWRNKQNLENLLKKNLK
ATMFIAFFVADLTEALEMRENLQRQLQEIMSATKLPKGRRVSIAALQNSPQTPDSVGRSG
RNGRSRALEALRHSRQAIMDINTEPSQNEQITWDDPTAREERARLANNLQWPGSPSQHSE
TLQINILNAEDDTPQHKVSLTDSELAEFAEATGELDETNKNKTAKSPGPKKVETPPKDNI
ILTPQAPSIAFPLANPPVAPQPKGQEEKKGGKIQPVFQLSSLNPQERIDYCHLIEELGGV
VLEKQCFDPSCTHIIVGHPMRNEKYLASMAAGKWILHRSYLEACRAVGHFIEEEDYEWGC
SSILDVLPGINAQQRKLAVSALRWRKFMQRQRENNSSSEGAFSGWKVILNVDQAKEAGFR
RLLQSGGAKVFSSHSPSMYKESSHLFVDFSKLKAEDPRVNVAEAAAHKVNCLKPEYIADY
LTQDPPPAMENYCLPEAAQYLQNKLDSSKCITSRKRKASGDASVVKKSRIN
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatggatagagatccgttcttcgtgaaatttgtacaaaacttagaacagagt
tcagatcttgcaacaaaggcctatgatgctattagagagttacaatcagaagagttcctg
cagactgttgatgaagaagcagcacttttgttacagcaaaaagataaatctctctacatt
ttcagttcttttaatggaccagcattcatccaccttaaaaagctgggctgcaggattgtc
agcccactggtggttcttttctgcctccagcatcagcgatccgtgccgaaagccgaacac
cctgtatacaacatgtccatggcagacgtgactgtttcctgtaccagtctggagaaggaa
acaagagaagaagtgagtacattggtgcagttaatgggaggtcgtgtgttccgagatctt
aatgtttcggttactcatctgattgctggagaggttggcagcaaaaagtacgtggtggct
gccaatctggggaggcccatcctactgccctcctgggtgaaggcatgctgggagaaatcc
caggacagtttgtttagatacacagacctgaacactgatgagtacttgtgccctatattt
cgtggctgcacaatctgtgtaactggattgaacaacttgaatagaaaggaggttcagagg
cttacgatagaacatggcggccagtatacagggcaactgaagatgaacgaatgtacacac
ctcattgtgcaggagcccaaaggtcagaagtatgaatgtgcaagaaaatggaatgtatat
tgcgtgtccatacactggctcttcagcagcattgagaagagattctgccaggacgagtcc
atgtacatggtggagcccaccatggacagagagcaggcccctaatacatccacacctaca
ggttgtgagaagaagcaagacgtttcttcagcttcattacttctaggcgtgagccaaatt
tccaacatcagtatgagctgtatcaacgaatctgcctttaacactattactgccagtcgg
ctggagccatctggagataacttagaaatgcttgatataagtgttttcaatgcacaagat
gacctgcttgatggctgcaaaatctacctgtgtgggtttggtggtaagaagctagataag
ttaagaaggcttatcaacagcggtgggggtctacgcttcaaccagctcagtgaggatgtc
acccacataatcatgggagagaaggatgaagaagtaaatcagttcttaagcaaggcatcc
cacagaccccacatagtaacagtaaagtggttgctggagagcttctccaaaggctgcctt
cttccagaggaaaaatacttccactcagactacctacccccagcaccctctgctgtggag
ccccctgtccgcaagtctgcgccacagaggcgaaacaccagtgttgagatgaaaacagcc
gtggcagtcagccctggcagggaacagagaaaagatgacgatttgctgtctcagtacatg
gaagaggacaaaacagttgttgaagctggggacagaagctgtgatgatgcaactcatgtt
accatgttggagacagacccttcaagcaacaccatgctggaggaggctgccacagtgttg
gaggaggggggtctattcagtgggaagcggttcctgatagctggcttcagcggagaggac
gaggcctgcctggcagagttgatcaaggagcatgctgggaaagtgcttggggcccgtagc
cgagccattgctgactacgcagtggtaccactgctgggctgtgaggtggagtccacagtg
ggagatgtagtgaccaacacctggctggcgatgtgtattgaacagcagattctcttagac
ctccagatgaatcccatgttcactccagtcgctgtggtggaaggaagcactccgctgaag
gactgtgttctttctgtcagccagtttattggtgtggagagggactcgctagtctaccta
gctgagcttcttggagccagagtacaggaattctttgttcggaaagccaaccagcggaaa
ggcatgctggctagtacccatctggtgctgaaggagccggaggggtccaagtatgaagct
gccaagaagtggaacatgcctgcggtcaccatgcgctgggtcctggattctgcacacacc
ggcaggagagctgaggaagaccgcttcctagtggaaaatgctggctcaccagaaaatgaa
gaaagttgttacataggtgggtctcaaaaacaagaaaaacccagcatgtccatgcgctcc
cctgagattcccatggctcaactgaacacattgaagaacactgtggtgaccccgctggac
atgaaccgatttcaaagcaaagccttccagtcagtgatctcccgtcctgatggaggaaag
gtgacaccaggtattgagtgcagagcgctgcagagagaagcatccctacagcttgacaca
ccgtccaggtttctgtgcagagaccagctcttcaaaccatcctttgatgtgaaggatgcc
ctggcagctctggagacaccaggaggcccacggcagcacagaaggaaaatgagcacccca
ctctctgaggtgattggaaggaacatgaaggttgccctggcaaacagcactcgcaacaac
atggctgctgtcactgccagcccacagctagctacacctgagccacaacaggtggaagag
aagccaacgccccttgcaggtgtcattatctgtgtgagtaagaaactcattaagaagcag
agtgagctgaacgccactgcagcctcccttggggcggactacaggtggtcttacgatgaa
acagtaacacacttcatctatcaaggccggcagaatgacactagtcgggagtacaaggcc
gtcaaagaaagagacgttcatattgtctcacagcactggcttcaagcatgtgcagaggag
cagaggcttgtgcctgaatccctgtatccttttacatacaatccaaaaatgagtctgaac
ctcagccaagtgcaggacagaagattgtctacacctaggtctccacccagcatcccctac
tgtaacaacctggaacaggattgtgagcaggacaagtcacatgttccattagataaaaat
gaagagttgacagaggaaaccaggaaccaccatgaagaaagaaaccctgaagaaacaaat
ctagaaaatctctggagaaacaaacaaaatctagaaaatctattaaaaaaaaacttaaag
gcaacaatgtttattgctttttttgttgcagatctgacagaagcattagaaatgcgagag
aatctgcagcggcagctccaggagatcatgtcggccaccaagctgccaaaaggccgccgg
gtttcaatagctgctttgcagaattctccccagacccctgacagtgtgggccgctcgggg
aggaatgggcgtagccgggccctggaggcactcaggcattcccgtcaggccataatggac
attaacacagagccctctcagaacgagcagattacctgggacgaccccactgccagagaa
gagagagctaggctggccaataacctgcagtggcccggcagtccgtcccagcactctgag
actctccagatcaacatcctcaatgcagaggatgacaccccccagcataaagtctcattg
actgattcagaactagctgaatttgctgaagctacaggtgaacttgatgaaacaaacaag
aacaagactgcaaaatctccaggcccaaaaaaggttgaaaccccaccaaaagataacatt
atcctcacgccacaagctcccagcatcgcttttcctctggcaaacccaccagttgcacca
cagcccaagggacaggaggagaaaaaaggaggaaagatccagcccgtatttcagctgtct
tcgcttaaccctcaagaaagaattgactattgccacctcattgaagaacttggtggggtg
gttctggagaaacagtgcttcgatcctagctgcacacacatcattgtgggacaccccatg
aggaacgagaagtacctggcctcaatggctgctggaaagtggatactccaccggtcctat
ctggaggcatgcagagctgttgggcacttcattgaggaggaggattatgagtggggctgc
agctccatccttgacgttcttcctggaataaatgcccagcagaggaaacttgctgtttct
gcgttgagatggagaaagttcatgcagaggcaaagggagaacaacagtagctcagaggga
gcatttagtggctggaaagtaatattaaatgttgatcaagcgaaagaggcaggatttaga
cgactgctccaatctggtggagctaaggttttttcaagtcattcaccatcaatgtacaag
gaatccagtcatctatttgtggatttcagcaaactaaaagctgaggatcccagagtgaat
gtggcggaggctgctgctcataaagtgaattgccttaaaccagaatatattgcagattat
cttacgcaggacccacctcctgcaatggaaaattactgcctaccagaagctgcacagtat
ttgcagaataagttggattcaagtaaatgtataacctctcgcaaacggaaagcttctgga
gatgcatcagtagtgaagaagtccaggataaactaa
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integrated database retrieval system
