Acipenser ruthenus (sterlet): 117399649
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Entry
117399649 CDS
T07327
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117399649 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117399649 (pex1)
Membrane trafficking [BR:
arut04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117399649 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_16
AAA_lid_3
NACHT
nSTAND3
AAA_22
TIP49
AAA_2
AAA_14
RuvB_N
IstB_IS21
AAA_33
AAA_5
AAA_28
RNA_helicase
Mg_chelatase
DUF815
AAA_7
Sigma54_activat
AAA_18
ABC_tran
NPHP3_N
TsaE
Sigma54_activ_2
AAA_29
AAA_25
AAA_19
AAA_30
ATPase_2
KTI12
Parvo_NS1
ATPase
Rad17
SLFN-g3_helicase
APS_kinase
ORC-CDC6-like
cobW
Vps4_C
Motif
Other DBs
NCBI-GeneID:
117399649
NCBI-ProteinID:
XP_033854843
LinkDB
All DBs
Position
3:complement(93445003..93464420)
Genome browser
AA seq
1287 aa
AA seq
DB search
MFVSHGIQPVSLAFTNTKNCFLNIPSSLATQLRLQENQAIELSWGLHQSVFLSWTRCQRS
AFLEENVVEINRQLGDKLGIKDREQAFLRPCFQVLSMQQVFVEPLSSDDWEILELHSSTL
EQRLLDQIRIVYPNGVFPVWVDQHTVIYIKIGSLTPAAPYGRLEQLTELIVSPKLRQTED
SLSDFSSEAGRNPDVSRFQSPYGDRNIDIPATKSALGTKMYEGQAENIQNIPGNQKVSTS
GRITDLRSLIRYMFTGSTDSNKEIPSVPSIPSVLTDSVFRVCRSSPFSTDQQNTVYVNQA
TTVHILPWNHQSQDGDCCQCVITYGKLTKLLSPNELKEKAKLNMLQPDKRKSSGNSANAT
GKQSPSGRSQEGIESTVVRIICHGAEDLEYMQRFRYGNEKLYCGKVWIPESLRRRLNIEV
CAAIRLRPLKSTPTIASTVRLQPLQTLPHKVNDQDVRSAFLDGLQAQRNDEMSWLTGRVS
YVQLPVNEAQVEFCLTVIMPEAVSCRSDEIFLLSSSLIQETDIQVMMPPLIEEADTITVK
DDIDQTLSFSTLRCLGGVEEVGRTAFEHIIHSLRGRPLSQELLSVAPGLRNGALLLTGPK
GSGKTALAKALCREAADKLDAYVEVIDCKQLRGVISMSQYSGKRCETVRKKLEEAFAEAV
WRQPSLLLLDDLDHIAGAASSPEQEQGPEALLGKQLAQALTDLASEAVVHGSLIALIATS
QSERSLHPSLVSVQGSHFFQCFTSIKPPSQVQRNEILRAVIQNKSSIAEETWQVVDTQSL
ARETEGFVARDFTLLVERAIHASVVNNRSTSAQDLFLATCDFHQALKGFTPSSLRNANLH
IPKDLGWERVGGLHEARQQLMDTIQLPAKYPALFANLPVRQQSGVLLYGAPGTGKTLLAA
AVANESGMNFISIKGPELLSKYIGASEQAIRDVFNRAQAAKPCILFFDEFDSIAPRRGHD
NTGVTDRVVNQMLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKSLYCPPPDQGA
RKEILNALSLSVPLAEDVDFDLIAANTEFFTGADLKALLYNAQLEAIHTNLAACLLDVGS
GSDSDVSLSSMIFLNHSSGSDDSSGEVEGGLERSVVCLDSSELLPEDPRQNAWRLYFGSS
YESELGNQTPSELCLSGPNSMTHEITGASLRDVVSCHMPVLMSSLQEGYQELNQEQAEQL
RAEISNIRSNYRNRHMEEQLHLQSGPSKPAVLICQSHLLTALSNTRPSIPQQDWAKYTDL
YNSFGNSREGKSQGGPNLKAGQRVTLA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcagccatgggattcagccagtttcgttggcgtttacgaacacaaaaaactgc
tttctgaatatcccttcaagtcttgcaacacagcttcgccttcaagagaaccaagcaatt
gagctttcctggggtttgcatcagtctgtatttctcagctggacgagatgccaacgcagt
gctttcctggaggaaaatgttgtggagataaacagacaacttggggacaaacttggaatc
aaggatcgggagcaggcatttcttaggccctgtttccaagtcctgtccatgcagcaggta
tttgttgaaccactctcgtctgacgactgggaaatattggaacttcatagttcaactcta
gaacaacgcctccttgaccagattaggattgtgtatccaaatggagtcttcccagtgtgg
gtagaccagcacacagtcatttatattaaaataggatctctcacacctgccgctccttat
ggccgactggagcaactcactgaacttattgtctcgcctaaactacgtcagactgaggac
agtctgtcagatttctcctcagaagctgggagaaaccctgatgtaagcagattccaaagc
ccatatggagatagaaatatagatataccagccactaaatcagcacttggaaccaagatg
tacgaaggtcaagcagaaaacatacagaacatacccggaaatcagaaagtctctacatct
ggtagaattactgatttaaggagcttgattagatacatgtttacaggaagcacggacagc
aacaaagagattccttctgttccatccattccatctgttctcacagactctgtattcaga
gtctgcaggagttcaccattctctacagaccagcagaacacagtgtatgtaaaccaagca
accactgttcacattctgccatggaaccaccagtcacaggatggagactgttgtcagtgt
gtaataacgtatggcaagctaacgaaactgttgtcaccaaacgagctcaaagaaaaggca
aaactgaacatgctgcagccggacaagaggaaaagcagtgggaactctgcaaatgctact
ggaaaacaatccccatctggccgtagtcaggaaggtattgaatccactgttgtcaggatc
atatgccatggggctgaagacctggaatacatgcagaggttccgttacgggaacgaaaaa
ctatattgtggaaaggtttggattcctgaaagcttgagaagaaggttgaacattgaagtg
tgtgcagctataaggttacgcccattgaaatccacccctacaatagcatccactgtccga
ctgcagcccttgcaaacgctgcctcataaagtaaatgaccaggatgtcagatctgctttc
ctcgacgggcttcaagctcagagaaatgatgaaatgtcatggttaacaggaagggtgagc
tacgtgcagttacctgtgaacgaagcccaggtagaattctgcctgactgtgattatgcct
gaggctgtgagctgcagatcagatgagatttttctgttgtcttccagtttgatacaagag
acagacatacaggtaatgatgccgcctctgattgaagaagcagataccataacagtcaaa
gatgatatcgaccagactctttccttttcaacacttaggtgtttgggaggagtagaagaa
gtgggccgcacagctttcgaacacattattcacagcctgagggggcgccctctctctcaa
gagctactctctgtagctccaggtctaagaaatggagctcttctgttaactggacccaag
ggtagtggaaagacagctcttgcaaaggccttgtgtagagaagcagctgataaactggat
gcctatgtggaagtgattgattgtaaacaactgcgaggtgtgatttcaatgtctcaatac
tcaggtaagaggtgtgaaacggtgcgtaagaagctggaggaggcgtttgcagaggctgtg
tggagacagccctccctcctcctcctggatgacctggatcacattgctggagctgcttcc
tcaccagagcaagagcagggcccagaggcgcttctgggaaaacagcttgcacaggctctt
acggatctagccagcgaagctgttgtccatgggagcctgattgccctgattgctacgagc
cagagcgagcgttctttacacccctctcttgtgtcagtgcaagggtctcacttctttcag
tgcttcacaagcatcaagcctcccagtcaggtccaaaggaatgaaatcctgagggctgtg
attcagaataaaagcagcattgctgaagaaacatggcaggtggttgacactcagtccctc
gccagggagacagaagggtttgtggcgagagatttcaccttgctggtagagagagccata
catgccagtgtggtcaacaaccggagcacgtcagcacaagacctgtttttggctacctgt
gactttcaccaagcactcaaaggctttacaccatcctcgctgagaaatgctaacctgcac
atcccgaaggacctgggctgggagcgtgttgggggcttgcatgaagccaggcagcagctc
atggataccattcagttgccagcgaagtaccctgcattgtttgcaaatctgcccgttcgc
cagcagtcaggagtgctattgtatggagcccccggcacagggaagaccttgttagctgct
gcagtcgccaatgagagcggaatgaatttcattagcattaagggtcctgagcttctcagc
aaatacattggagcaagtgagcaggcaattcgagatgtctttaacagggcacaggcagca
aagccctgcattctgttctttgatgagtttgactccattgcccctcgcagaggccatgat
aacactggagtcactgaccgagtggtcaaccaaatgctaactcagctggatggagttgaa
ggattgcaaggtgtatatgtattagcagccaccagtcgccctgacttgatagatccagct
ttattgagaccaggccgactggataagtctttatactgccctccacctgaccagggagct
cggaaagagatcctgaatgccctcagtctctctgtgcccttggcagaggatgtggatttt
gacctcattgctgctaatacagagttcttcactggggctgacctgaaggctctactctac
aatgctcaactggaggcaatccacaccaacctggctgcatgtttgcttgacgtgggctct
ggttcagacagtgacgttagcctgtcctccatgatcttcctgaaccacagcagcggctct
gacgactcgagcggagaggtagaaggtggactggagcgctccgtggtctgcctggactcc
tcggagctgcttcctgaggaccctcggcagaacgcctggcgtctgtacttcggcagctcc
tatgagtctgagctaggaaaccagaccccttcggaactgtgtttatctggaccaaattca
atgactcatgagattactggtgcctcattaagggatgtggtgtcctgtcacatgccagtg
ctcatgtcttcactacaagagggttatcaagaacttaatcaggagcaggcagagcagctg
cgagctgagatcagcaacatcagatccaactacagaaacaggcatatggaggaacagctt
cacttgcagtcaggacccagcaaacctgctgtcttaatctgccaatctcatctgctgaca
gcattgtcaaacaccagaccgtcaatacctcagcaagactgggcaaaatacacagatcta
tacaattcctttgggaactcccgtgaaggcaagtctcagggtgggcctaatttgaaagct
ggacaaagagttactctagcttag
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integrated database retrieval system
