Acipenser ruthenus (sterlet): 117399745
Help
Entry
117399745 CDS
T07327
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117399745 (tdp2b)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
117399745 (tdp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
117399745
NCBI-ProteinID:
XP_033855003
LinkDB
All DBs
Position
3:complement(37661594..37674468)
Genome browser
AA seq
369 aa
AA seq
DB search
MEDTEDQMQQSELAVVEERNRMCDEFASITSTDNAVAQGYLAENDWDIERAVHSFFEADV
ETIPCDISPELDSNKKSNMKCGSEPLVCIDLTEEEPASGSSSTVEGGGSEVQTEPEDNSR
FSVLTWNIDGLDITNPLERARGICSYIALYSPDVVFLQEVVPPYLSYLKKRAVSYTIVEG
NEDCYFTAVMLKKSRVKLLKTEIIPFPSTSMMRNLLTVQASFCGIELHLMTSHLESTKNH
SGERINQLKTVLTKIKEVPETSIVIFGGDTNLRDQEVAKIGGLPSNVCDIWEYLGKPEHC
RYTWDTKTNHNLQVNYVSRMRFDRVFFRASKGGGQIIPQNMDLIGLEKLDCGKFPSDHWG
IYCDFRVVL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaagatactgaagaccaaatgcagcaatcggaattggctgtggtggaagagaggaac
cgcatgtgcgatgaatttgcctccataacgagcacagataatgctgtggcacaaggatac
ctcgctgaaaacgactgggatatagaaagggcagtacattctttttttgaagctgacgtt
gagacaatcccttgtgatatatccccagagctggattcgaacaagaaaagcaatatgaag
tgcggatcagagcctctcgtttgtattgacctgactgaagaagagccagccagtggaagt
agcagtacagttgagggtggtggttctgaagtccagaccgagccagaggataacagcagg
ttttcagtgttgacctggaacatcgatggacttgacattacaaacccacttgaacgtgcc
agggggatatgttcatacatagcactgtatagccccgatgtggtgtttcttcaagaagtt
gtaccgccgtatttgtcctatctgaaaaaaagagcagtcagttacacaatcgttgaagga
aatgaggattgctattttactgcagtaatgttgaagaagtctcgagttaaactcctaaag
acagaaataattcctttcccttctacgtcaatgatgaggaatctgctaaccgtgcaggcc
agtttttgtggcattgagttgcacttaatgacatcccatttggaaagcactaaaaaccat
tcaggcgaaagaattaaccaactgaagacagtattgacaaaaatcaaagaagtacctgag
acatctatagtgatatttggaggtgacaccaacctgagggaccaagaggttgctaaaatt
ggaggtttacccagcaacgtgtgtgatatttgggagtaccttggaaaacctgagcactgc
agatatacctgggatacgaaaacaaaccacaacctgcaggtaaactacgttagcaggatg
cgctttgatcgtgtattctttcgagcgtcgaaaggtgggggtcagatcattccacagaac
atggacctcataggactagaaaagctagactgtggcaaattccccagtgatcactggggg
atctactgtgattttagggttgtattataa
DBGET
integrated database retrieval system
