Acipenser ruthenus (sterlet): 117399785
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Entry
117399785 CDS
T07327
Name
(RefSeq) ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117399785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117399785
03009 Ribosome biogenesis [BR:
arut03009
]
117399785
03036 Chromosome and associated proteins [BR:
arut03036
]
117399785
Enzymes [BR:
arut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
117399785
Messenger RNA biogenesis [BR:
arut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
117399785
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
90S particles
RNase
117399785
Prokaryotic type
rRNA processing factors
117399785
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
117399785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
Motif
Other DBs
NCBI-GeneID:
117399785
NCBI-ProteinID:
XP_034771022
LinkDB
All DBs
Position
3:complement(15863837..15913930)
Genome browser
AA seq
1327 aa
AA seq
DB search
MSFHPGRGCPRGRGASGQRGTPHNYRPQNLRPIAPPQPMPPFLYDPQAAPSPGYSNSGSA
GYMPPRPDFIPYPPPMPPLGQNSTNQCPLRPPFPNPPVRQAFPGPPNFPPPPILNPTNNS
LSGSASSGQSSYHYMMPPPPLPHTPVPPSMPQQMSYQPPYSINYSQPPFPPPNFNAGYQQ
HSSSFNTDQFRHASQYKAEKSQSERRSPERNRRPEETRHKGYSYGSHGDRHRMDCSGERR
DRGRSPDRRRQESSRHRSDYDRGRTPPRHRSRERSRERHRHRESRRSVSCERQHRKDYKR
PRSRSSSRDRKRPRWEEEKERRPESQGSSRDKNYSSVKNKEPENNQVERADDREEEELLK
PVWIRCTHAENYYSNDPMDQVGDSTIVGTSKLRDLYDRFEEELVKRQERAKASRPQWEPP
KTKLDDDLDESSSDSECESDGGSSCSSSSSDSDVFDVIAEIKRKKAHPDRLQEELWYNDR
GQMNDGPLCKCSAKARRTGIRHSIYPGEEHVKACRLMTNNAGRLYHYRITVSPPTNFLTD
RPTVIEYDDHEYIFEGFSLFSHTPLTNIPLCRVIRFNIDYTIHFIEEMAPENYCVKGLEL
FSSYLFKDILELYDWNLKGPESENDASICQKFHFMPRFVRFLPDGGKEVLSMHQVLLYML
HSNKPLVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLDREQFNPDVI
TFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVRQVDKQKLTQREEALQK
IRQKNTGRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLKDLDKLIGYVF
KERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGINTLIN
IMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQ
HLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGGLEEARQLFGRL
LFKNEDLREVWLNYPQHPLQVQEPSTDRQLVETSPVLQKLTEFEETIGVLFTHVRLLARA
FTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQ
AKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFP
RLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGE
RIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRREREQQEKESD
ETEEVRK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcatcctggccgaggttgtccccgtggaaggggtgcatctggacagcgtgga
acacctcataattacaggccacagaatctcagaccaattgcacctccgcagcccatgcct
ccttttctttatgatccacaagctgctccctcccctggctattctaactctggtagtgca
ggttacatgcctcccaggcctgattttataccttatccaccaccaatgcccccactggga
cagaattctacaaaccagtgcccattgagacccccgtttcctaaccctccagttaggcaa
gccttcccagggccccctaactttcctccccctccaattctaaaccctaccaacaactcc
ttgtctggatcagcttcttcaggtcaaagctcctatcattacatgatgcctcctccacca
ttaccacacacccctgttccaccctccatgccacagcaaatgagctaccagccaccttat
tccattaactattcccagccgccctttcctccacccaattttaatgccggatatcaacag
cactccagctctttcaacactgatcagttcagacatgcaagtcagtacaaagctgagaag
tcgcagagtgagcgaaggtcgccagaaagaaaccggcgccctgaggagaccaggcacaag
gggtacagctatggaagccatggtgacaggcacaggatggactgttccggagaacggcgg
gatcgtggaaggagcccagacaggaggaggcaggaaagtagccgtcacagatcagactat
gacagaggcagaacaccacctcgccacagaagtcgggagcgaagcagggaaaggcatcga
cacagggagagcagacggtctgtgtcttgtgaaaggcaacacagaaaagactacaagaga
ccaaggagtcgttcgagcagtcgggacaggaagcgacctcgttgggaagaggagaaggag
aggaggccagagagccagggctcaagtagagataagaattactcttctgtgaaaaacaaa
gaaccagaaaataatcaagtagaaagagctgatgatcgagaagaggaagagcttcttaag
ccggtgtggattcgctgtacccatgctgagaattactactcgaatgaccctatggatcaa
gtgggtgactctaccattgttggcacaagtaaactgcgagatctgtatgacagatttgaa
gaggagttggtgaagagacaagagcgagccaaagcatcaagacctcaatgggaaccacca
aaaaccaaattagatgatgatctagatgagagttcaagtgactctgaatgcgagtcggat
ggaggaagcagctgcagcagcagtagttcagactcggacgtcttcgatgtcattgcggaa
atcaaacgcaaaaaggcacacccggaccgcctgcaggaggaactctggtacaatgatcgt
ggccagatgaatgatgggccattgtgcaagtgcagtgccaaagccaggcggactggaatc
cgacacagcatttatccaggggaagagcatgttaaagcgtgtcgtctaatgacaaacaat
gcaggaagactgtaccactacagaattacagtgtccccacctaccaacttcttaactgac
cgacctactgtaatagaatatgatgatcatgagtacatctttgaaggattctctttgttt
tcacacactccgcttactaatattccattatgcagagtgatccgttttaacatagattac
accattcattttattgaagaaatggcaccagagaattactgtgtaaaaggactggagctg
ttttcatcttatttatttaaagatatcttggagctgtacgactggaatcttaaggggcct
gaaagtgagaatgatgcttccatttgtcaaaaatttcactttatgcctcgttttgttaga
tttcttcctgacggtgggaaggaggtgctgtcaatgcaccaggtgctcctgtacatgctg
cacagcaacaaaccgctggttcctgaagaagagattgccaacatgctgcaatgggaggag
ttggagtggcagaaatatgcagaggaatgtaaaggaatgattgtcaccagtcctggcatg
aaacccagctctgttcgaattgaccaattggaccgggagcagtttaacccagatgtcatt
acctttcctataattgtgcactttgggataagaccagcgcaactgagctatgccggcgac
ccacagtaccagaagttatggaagagctatgtgaaactacgccatctgctggccaacagt
ccaaaagtcagacaagtggacaaacagaagctaacacaaagagaggaagctcttcagaag
atcagacagaaaaacaccggacgacgagaggtgactgtggaactgagtagccaggggttc
tggaaaacaggcatccgatctgatgtttgccagcatgcaatgatgttaccggtccttaca
caccacattcgctaccatcaatgccttaaggatttggacaagttgatcggatatgtgttc
aaggaacgctgtcttctgcagctggccatgacccatccaagtcatcacttgaattttggc
atgaacccagaccatgccagaaactctctttcaaactgtggtattcggcagcccaagtat
ggcgatagaaaagtccatcacatgtacatgagaaaaaaaggtataaacacattaataaat
ataatgtcgcggcttggccaggatgacccatcaccttctagaataaatcataatgagcgc
ctggagtttcttggtgatgctgttgtggagttcttaacaagtgtccacctctattatttg
tttccaagccttgaagaaggaggcttagctacgtatcgtacagctattgttcagaatcag
catcttgccatgctagctaagaagctggagctggaccggttcatgctttatgcacatgga
cctgatctgtgccgagagtctgatctgaggcatgctatggccaactgctttgaagcactt
ataggagcagtatacttggagggtggtttagaggaggccagacagctgtttggacgtttg
ctgtttaagaatgaggacctgcgggaagtatggcttaattatccgcaacatccattgcaa
gtgcaggagcccagcactgatagacaactcgttgagacctctccagtcttacaaaagctg
acggaatttgaagaaacaattggagtgctttttacccatgttcgtctcttggctcgcgct
ttcacattgcgtacagtgggatttaatcatctgacgcttggccacaatcagaggatggaa
ttcttgggtgactcaataatgcaattggttgccacagagtacttgttcatccatttccca
gaccatcatgaagggcatttaacgttgctgcgaagttcattggtaaataacaggacccaa
gccaaagttgcagaagaattgggtatgcaggagtttgcaatcacaaatgacaaaacaaag
agaccagtggctctaaggacaaagactctagcagatcttttagaatcttttattgctgca
ctgtacattgacaaggacttggagtatgtgcataccttcatgaatgtttgttttttccca
aggttaaaggagttcatacttaatcaggactggaatgaccccaaatcccagctccaacag
tgttgtttgaccctcagaacggaaggaaaggaaccagatattccactttacaagacttta
cagactgtgggtccatcacatgctagaacatacactgttgcggtttactttaaaggcgaa
aggattggatgtgggaaaggaccaagtattcagcaagcagaaatgggagctgcaatggat
gcccttgaaaaatataactttccccagatggctcaccagaagcgcttcattgaacggaaa
tacagacaggagctaaaagaaatgagacgggaacgagaacagcaagagaaagagtctgat
gagacggaagaggtccgaaagtaa
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integrated database retrieval system
