Acipenser ruthenus (sterlet): 117399957
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Entry
117399957 CDS
T07327
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117399957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117399957
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117399957
U7-dependent histone pre-mRNA processing factors
117399957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
117399957
NCBI-ProteinID:
XP_033855342
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Position
24
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AA seq
787 aa
AA seq
DB search
MTSIIKLTAISGVQEESALCYLLQVDEFRFLLDCGWDESFSMDIIDAIKRHVHQVDAVLL
SHPDPLHLGALPYAVGKLGLNCSIYATIPVYKMGQMFMYDLYQSRHNTEDFNLFTLDDVD
SAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMVNRPSLLITDSFNATYVQPRRKQRDEQLLTNVMETLRGDGNVLIAADTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLESGFSRELFIQWCQDQKNSIILTYRTS
PGTLGRYLIDNPGERIIDLELRKRIKLEGREFEEYMEKEKMKKEAAKKLEQAKEVDVDSS
DESDMEEDVEQPLPGKAKHDLMMKGEGGRKGGFFKQAKKSYPMFPTHEERIKWDEYGEII
RPEEFLVPELQATEEEKNKMESGLTNGEEPMDQDLSDVPTKCISTTESIEIKARITYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASHDLAESCKAFSGKDIKIYTPKLQETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGMLDMRVVKVDTGVIIEEGEIRDDAEEG
ELPMDIPSSTLTTNSSAIAQQKAIKSLFGDDDKDISEESDIIPTLEPLPANEIPGHQAVF
INEPRLSDFKQVLLREGIQAEFVGGVLVCNNMVAVRRTEAGRIGLEGCLCEDYYKIRGLL
YEQYAVV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgacctctattatcaagttgactgcgatttcaggggtgcaggaggaatcggctctctgc
tacctgcttcaggtggacgagtttcgcttcttactggactgtggatgggatgaaagtttc
tctatggatatcatagatgcaattaaaaggcatgttcaccaggtggatgcagtgcttctc
tcccatcctgatcctctgcacctcggagctcttccttatgcagtggggaagctggggcta
aattgtagtatttatgccactatcccagtttacaaaatggggcagatgtttatgtatgac
ctttatcagtcgcgtcacaacactgaagacttcaacttgtttaccctggatgatgtggac
tcagcctttgacaagatacagcagttaaagtactcccagattgtcaacttgaaaggcaaa
ggacatggcttgtcaataactccactgccagccggtcacatgataggaggaaccatatgg
aagattgtgaaggatggggaggaggaaattgtgtatgctgttgactttaaccataagagg
gaaatccatttgaatggatgttctctggaaatggttaacaggccatctctgctcatcaca
gattccttcaatgccacatatgtccaacccagaaggaaacagcgtgacgaacaattacta
acgaatgtgatggagacgttgcggggggatggaaatgtgctgattgctgcagacactgca
gggagagtccttgagttagctcagctcttggatcagatctggagaaccaaggatgcagga
cttggagtctactcacttgcattgctcaataatgtcagctacaatgtagtggagttttca
aaatcgcaggtggagtggatgagtgacaagctgatgaggtgttttgaggacaagcgaaac
aaccccttccagttccgccacctctccctttgccacagcctctctgacctggcccgagta
cccagccccaaggtggtacttgccagccagcctgacctggagtctggcttctccagggaa
ctgttcatccagtggtgccaggatcagaagaactcaatcatcctcacctacaggacctcc
cccggcaccctcggcagatatctgatagacaaccctggggaaaggatcattgacctggag
ttaaggaaacggattaagttggaaggaagggagtttgaagaatacatggaaaaggaaaaa
atgaaaaaagaagctgccaaaaagctagaacaagcaaaagaagtggatgttgactccagt
gatgagagtgacatggaggaggatgtggaacagccccttcctgggaaggctaagcatgac
ctgatgatgaagggcgaaggcggccgtaagggaggctttttcaaacaggctaaaaagtcc
taccccatgtttcccacccatgaagaaagaatcaaatgggatgaatatggagaaattatt
aggcctgaagagttcctggttcctgagcttcaggccacagaagaagaaaaaaataagatg
gaatctggattgacaaatggagaggagcctatggaccaagacctgtctgatgtgcccaca
aagtgcatctcaacaacagagtccattgaaatcaaagctagaataacatacatagactat
gaaggacgctcggacggagactcaattaaaaagatcataaaccagatgaagcctcgacag
ttggtcattgtgcacggacctccggaagccagtcatgacctcgctgagtcttgcaaagct
ttcagtgggaaggacattaagatttacacacccaaactgcaggaaactgtggacgcaacg
agtgaaacccatatctaccaggtgaggttaaaggactccttagtgagctcccttcagttc
tgtaaagccaaggacgcagagcttgcctggatcgatggcatgttggacatgagagttgtc
aaagtggacacaggagttattatcgaagaaggagagatcagagatgatgcagaggaggga
gagctgcccatggacattccctcctccaccctcaccaccaactccagcgccatcgctcag
cagaaagccatcaagagcctgttcggagacgatgacaaggacatttccgaggagagtgac
atcattccaaccttggagccccttcccgcaaacgagattccaggccatcaggcagtcttc
attaatgaacccagactgtcagatttcaaacaggttttgttacgagaagggatccaggca
gagtttgttggcggagtcttggtttgcaacaacatggttgctgtccgcaggactgaggct
ggacgaatcggattagaaggctgtctatgtgaagattactacaaaatacggggactccta
tatgaacagtatgcagtagtttaa
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