Acipenser ruthenus (sterlet): 117399992
Help
Entry
117399992 CDS
T07327
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117399992
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117399992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
117399992
NCBI-ProteinID:
XP_033855346
LinkDB
All DBs
Position
3:complement(81224671..81270331)
Genome browser
AA seq
1106 aa
AA seq
DB search
MSLLNEKKKQSSFYECVVNEDDSADIFQVVSDGHIAELQPLIKMKPDCLRGVDSSNSSPL
HYAAGGGCIQLIQAIINTTGSEGLNVTDNKRNTPLHLAVKNKQSESCRTLLELGADPNIL
NANLMSPLHMAINLRHNEIVEVLLSHSSVDMNLEGDLGNTPVMLACSIDNHEALNLLLTH
GAHLRRQNKLGHFAIHAAAFTGSKKSMEIVLKKGEEMGYQIERHINCVDKSGSSPLHLAV
HGGNIEVIQLCIANGAKIDLQQSDKSTALHFACTQGAIEAVKLMLSTYNGGQDVVNIIDG
AHQTLLHKATMFDHVVLVEYLLMKGANIDSLDCESHSPLLLATTCGAWQTVELLVWRGAN
VKLKDSCGCNFLHLAVQQPKGLKNISDEILQLKDVKELLNDEDNEGCIPLHYACRLGIQE
SVTNMLGLKVSLHLKSKDKKSPLHFAAGFGRFNTCHQLLETIRDSRLLNEGDENGMTPLH
LASQNGHIKVVELLLRKGALFLCDYKGRTCLHYAAVEGYTQTMKILLEKNIKLIDKADED
GNTALHLAAREGHVSSVSLLLSKGAEISLNKSEATFFHEAIHQGRNEVACVVIESKRCHE
AITTFKYGSTKRDPKLEMIEFMPKSFKLLLDRSMKESEDDVNSQDYCIEYNFQYLQCPMK
NKKLSYEDKDVKCQPLVSLNTMVQFNRVELLTHPVSKKYLEMKWLAYGLKAHVLNLAIYS
LGLVPLTILIVNLRPEISVNRTAENGTEVREVTMSTQALDKHNSFYTVCMILVLVMTLYA
VGKEMVQIYRQCWRYFLDYSNYLDWCVAVESLLFVIPLLYNSQEHWPWQCGAIAVFHSWI
NFLLYMQRFERFGIYVVMFGEILRTLFCIILLFFFLNLAFALAFYALMLEQQTFATPALS
IMQTFAMMLGDISYQDNFLTPLIENRLPFPFLTFLILCWFLLLMPILLINLLIGLAVGDI
AEVQRNACLKRIAMQIDLHTNLEEKLPYWFMKRVDQVKVTVYPNRAGGLKPESRTRLNTG
HCQSTPLEFEVQTQKYRLKDISKVLEKQHSLLKRVVQKMEIVSEADEQDDTELFQYGNAK
RQQLLHNKSKWNSLVKAVHDKKHIIT
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcttaatgaaaagaagaaacagagcagtttctatgaatgtgttgtcaatgaa
gatgattcagcagatatattccaagtggtgtctgatggtcatatagccgagctacaaccc
ctgataaagatgaagcccgattgcctgaggggcgtagattcatccaattcaagccctttg
cactatgctgctggaggtggatgtattcagttgatacaagcaattataaacacaactggc
tctgaaggtttaaacgtaacagataacaaaaggaatacacccctgcatttggctgtcaaa
aacaaacagtcagaaagctgtagaacactgcttgaattaggagcggatccaaacatcctg
aatgccaacctaatgtctcctttacacatggctataaacttaagacacaacgagattgtt
gaggtgttactgtctcacagcagtgtagacatgaacctggaaggagatcttggaaacacc
ccagtgatgctggcctgttctatcgacaaccatgaagcattaaatctcctgctcacacat
ggtgcacatctgcgcagacaaaacaagctgggacattttgccatccatgcagctgctttt
acaggttcaaaaaaatctatggaaatagttttaaaaaaaggagaagagatgggctatcaa
attgagcgtcatattaactgcgtggacaaatccggtagtagcccccttcacttggctgtc
catggtgggaacattgaagtgattcaactatgcatagcaaatggagcaaaaattgatttg
caacagagtgataaatccactgcacttcattttgcttgtacgcaaggagccattgaagct
gtcaaactgatgctgtcaacatacaacggaggacaggatgtggtcaatattatcgacgga
gctcatcagacactgttgcataaggccacaatgtttgatcacgttgtactggtggaatat
cttttgatgaagggtgccaacattgacagccttgactgtgagtcccactcccctcttcta
ctggctacaacttgtggagcctggcagacagttgagcttttagtatggagaggagcaaat
gtgaagttaaaagactcttgtggctgcaacttcctacacttggctgtgcagcagcccaaa
ggactgaagaatatatctgatgaaattctacaactcaaggatgtgaaggagcttctgaat
gatgaagacaatgaggggtgtattccacttcattatgcatgcagactaggaatccaagaa
tcagtaactaacatgctggggttgaaggtatcactccatttaaaatcaaaggataagaaa
tctccactgcatttcgcagctgggtttgggcgtttcaatacttgtcaccagttgctggaa
accataagagacagcagactacttaatgaaggagacgagaatggaatgaccccactccat
ctagcatctcagaatggacacattaaagttgttgaactgttgctaaggaagggtgcttta
ttcctttgtgattataaaggccggacatgcttacattatgctgcagtggaaggctatact
caaacaatgaagatacttttggaaaaaaacataaagcttatagataaggctgatgaggat
gggaacacagcccttcatctagctgcaagggaagggcatgtcagttctgtaagccttctg
ttgagtaaaggagcggagatttcactcaacaaaagtgaggccactttctttcatgaagct
atacaccaggggagaaatgaagtggcatgtgtcgtcattgaaagtaaaaggtgccatgaa
gctattacaacgtttaaatatggatctacgaaaagagaccctaaactggagatgattgaa
ttcatgccaaaaagttttaagttgcttttggacagatctatgaaagaatcagaagatgat
gtcaatagtcaagactactgtattgagtacaatttccaatatcttcagtgtccaatgaag
aataaaaagctgtcatacgaagataaggatgtgaagtgtcagcctcttgtttcactgaat
accatggtacagtttaaccgtgttgagcttttgacccaccctgtcagcaagaaatattta
gaaatgaaatggcttgcctatggactaaaggcccatgttctcaacctggctatctacagt
cttggtctggtgcctctaacaatcctcattgtgaatctgagaccagaaatatctgtgaat
agaacggcagagaatggaacagaagttagagaggtgaccatgagtactcaggccctggat
aagcataactctttttatacagtctgcatgatactggttcttgtcatgactctatatgca
gttggtaaagagatggtccagatataccggcagtgttggagatacttccttgactactct
aattatttagactggtgtgtagcagtcgagtctcttctctttgttatccccctcttgtat
aactctcaggaacactggccctggcaatgtggggccatcgctgtgtttcattcctggatc
aactttctcctttatatgcaaaggtttgaacgttttgggatttacgtagtgatgtttggt
gagatcctccgaactcttttttgtattatcctgttgttctttttcctgaacttggcattc
gccctggcgttttatgctctaatgcttgaacagcaaacatttgcaactcctgcactttcc
ataatgcagacttttgcgatgatgctgggagacattagttaccaggacaattttcttact
ccactcatagaaaatagattaccgtttccatttctcacctttttaattctctgctggttt
ttactactgatgccaatcctcctcattaatttgctgattggtttagctgttggagatatt
gctgaggtccagaggaatgcttgcttgaaaaggattgctatgcagattgatctccatact
aacttggaggaaaagctgccatactggtttatgaaacgagtggatcaggtcaaagttaca
gtctatcctaacagagctggtgggttaaagcctgaatcaagaacccggctgaacacaggc
cactgtcaatcaacgcctctggaatttgaagttcagacacagaagtacaggttgaaggat
atttcaaaggttttggaaaaacagcacagccttctaaaacgtgttgttcaaaaaatggaa
atagtgtcagaagctgatgagcaagatgacactgaacttttccagtatggcaatgcgaag
aggcagcagctgctccacaataagagcaagtggaattctttagtaaaagcagtgcatgac
aaaaaacatatcatcacataa
DBGET
integrated database retrieval system
