Acipenser ruthenus (sterlet): 117400226
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Entry
117400226 CDS
T07327
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117400226 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arut01009
]
117400226 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117400226 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
arut03029
]
117400226 (rb1cc1)
Protein phosphatases and associated proteins [BR:
arut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117400226 (rb1cc1)
Membrane trafficking [BR:
arut04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117400226 (rb1cc1)
Mitochondrial biogenesis [BR:
arut03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117400226 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Hydrolase
Motif
Other DBs
NCBI-GeneID:
117400226
NCBI-ProteinID:
XP_033855728
LinkDB
All DBs
Position
3:complement(84841224..84914946)
Genome browser
AA seq
1602 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVADLKHAIQVKYKIATQHQVLVVNGGECMVADRRVC
SYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSVENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCALSYQKLLCKYETAYNNYQQ
SIEDIKKKLASLGNAVSIMANIPLLECLTRHSYRESLERLSSPAEKEGAAEETDEENSTE
SVLHAGEPRTSQESSASFSMSVEHPTQDCATQENKETTSKSQDPVLQDCDPQEKSDLPLF
NVSLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLAECRDTIAKLDNQNMKAIKG
LEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIML
TNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELLERVR
VVEALGTVPQMYCLAVVEVVRRKIFIKHYREWANALVKDGKQLYEAEKAKRDSFGKLFRK
SFLRNRLFRGLDSWPPTSFCTRKPRKFDFELPEISLGDLQFLQSCCPPEVQSFLRVPTLC
GFEPLHQHVQVLHQLVKAAQSVDEMSQTITDLLSEQKASSSQPTPKSTTVQRPGSTTGAT
STSSKTPPSLSLQDPICQPLSVHGPLEDLSPDSIDAHTFDFETIGHPNMDTLLKQGSLDL
DSLTESPESDFMSAVNEFVIEENLTSPNVISDPQSPEMMVESLYSSVINAIDNRRIQDTT
TLEKENTKVAMLKVCIEKYRSAAEESQGSLKSIKEDLCNFRGLVQKEQRDFSFAFKSVWG
EVRNIIDNIKYSHDENLKEMYQHELQILQRDYEDETQRLREESDLNQKNLEEFKKVLIEL
EEGIKNKENEISLLKNEKDMFVESENRKDQKLLDLEQKMLGQNSEIQELLQSRESLKGDL
EKVYLEIEDNKQKLKLEFENVEKCHLKELEERLQIRHAKELNEYQEKVVKENQEKLDQMQ
ELHASEVQAYGNRLKELEVKVSELSDMRCKLEVEIALKETEVEELRMLLEETRSQQQETV
RFEVEKETEALRKEINDLKHQLQSMNDEYEVGLVELRALMRIDKDHCISELVGSHEEETT
LLHSELTSLQKKALDVERGLKEQIRQLQNDCDNQIKAQEKEKEEKERAFQEQQQHFNTVI
CGLQEDKKLLSSNLQQEKQTVMQIFNKEKEDAVKAALADAFKDFEHQKEAIEEKLLEKVK
QLENQLKEKGFTEREVLSSSHTEALAGKPLSINADLQEKLHEERASLLGQLERLEKTKNE
EMQNLKTSLIAEQQTNFNTVLTREKVKKEQIINELNDKLKKAAQQQERDKDLIETLSEDR
AHLLQEKKQLEEEFNKMRSSSMVSSAFFSSANPVWDDLAGACAAEPPADSERLVSVASIR
EDGRIDSAVEASMMAVHENISVISEEKQRIILLERTLHMKEEENKRLNQRLMSQSMSSVS
SRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLAALDLKPASGAPRR
PWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttcaggtcaacaatggaagtaccctaacttttgatactgaacta
gctgtacaaactgttgcagaccttaaacatgctatccaggtcaaatataagattgctacc
cagcaccaagttcttgtcgtcaatggtggggagtgcatggttgcggataggcgtgtttgc
agttacagcgctggcacggatacaaatcccatttttctgttcaacaaagagatgattttg
tgtgatcgccccccagcgattcctaaaacaactttttcggttgaaaatgaaatggagctg
aaggtggaagaatctctaatgatgccagcggtttttcacactgttgcctcaagaacacaa
ctagctgtggaaatgtttgaagttgccaagaagctttgctcattttgtgaacgcttggtc
catgatgaacaccttcaacaccaaggctgggctgccataatggctaacttggatgactgt
gcactctcttatcagaagcttctttgtaaatatgaaactgcctataacaattatcaacag
agcattgaggacataaagaagaaacttgccagcctagggaatgctgtatctattatggct
aatattccactcctggagtgtctgacgaggcatagctatagagaaagtttggaaagactg
agctcacctgctgagaaggaaggagcagcagaagaaactgatgaggaaaactctactgaa
tcagtgctacacgctggagaacctagaactagtcaagaatcgtccgcttcattttccatg
tcagtggaacatccaactcaggactgtgcaacacaagaaaacaaagagacaaccagtaaa
agtcaagatcctgtgctgcaagactgtgatccgcaagagaagagtgacttaccattattt
aatgtctctttattagactggataaatgtacaagatagaccaaatgacgttgaatctgtt
gtcagaaagtgctttgactccataaacaggcttgatccaagaatcattcaaccctttttg
gcagaatgtcgggatactattgccaaactggataatcagaacatgaaggctattaaaggt
cttgaagacaggctatatgcactagatcagatgatagccagctgtaaaaagctggtaaat
gaacagaaggaactagctcagggatttttagccaatcagaagagagctgaaaatctgaag
gacacttctgttctacctgacttgtgtctgagccatgcaaaccagctgatgatcatgtta
accaatcacaggaaactattggatattaaacagaagtgcaccactgccaaacaggagctt
gcaaacaatctgcaagttagactaaagtggtgttgttatgtgatgcttcatgcagatcag
gatggggagaaactgcaggccttgcttcgtcttttaactgagctgttggagagagttcgg
gtggttgaggctcttggcactgttcctcagatgtattgcttggctgttgtggaggttgtg
aggcggaagatttttataaaacactacagagaatgggccaatgctctagtaaaggatgga
aagcagctctatgaagcagaaaaagctaaaagagattcatttgggaagttgttcagaaaa
tcttttctcagaaatcgcttgtttagaggacttgattcttggcctcccacttcattttgc
acacgtaagcctcgcaagtttgactttgagcttcctgaaatatctttgggtgatctgcag
tttttgcagtcttgctgtcctccagaagttcagtcttttctcagggttccaacactgtgt
ggctttgagcctttacaccagcacgtacaggtccttcaccaactggtaaaagctgctcag
agtgtggatgaaatgtcacaaaccataacagacctactgagtgagcaaaaggcatccagt
agtcagcctactccaaaatccactacagtacaaaggccaggaagcacaacaggagccaca
tctacctcttccaaaactccaccctcactcagccttcaggatcccatatgtcaacctctg
agtgtccatggcccattagaagatttatctccagatagcattgatgcccatacatttgac
tttgagaccattggccatccaaacatggatacacttttaaaacaaggatctctagacttg
gactccttaacagaaagccccgagtcagacttcatgtctgcggttaatgagtttgtcatt
gaggaaaacttgacttctcctaacgtaatcagtgatccacaaagccctgagatgatggta
gaatctctttattcctctgtcattaatgcaatcgacaacaggcgcatccaagatacaacc
actttggaaaaggagaacaccaaagttgcaatgttgaaagtgtgcattgaaaaatacagg
tcagctgctgaggaatcacagggcagtttaaagagcatcaaggaggatctttgtaatttt
agaggattggttcaaaaggagcagagagattttagctttgctttcaaatctgtatgggga
gaagtaagaaacataattgataatattaagtattcccatgatgagaacttaaaagaaatg
tatcaacatgaactacaaatccttcaaagggattatgaagatgaaacacaaagattgagg
gaagaatctgacttgaaccagaaaaacctggaggaattcaaaaaggtgttgatagagctg
gaagagggcatcaaaaataaagaaaatgaaatttctttgttaaaaaatgaaaaagacatg
tttgtagaatcagaaaataggaaagatcaaaaactgcttgacttggagcaaaaaatgcta
ggtcaaaatagtgaaatacaagagctattgcaatctagagagtcactgaaaggagattta
gaaaaagtatatcttgagattgaagataacaagcaaaaactaaagcttgaatttgagaac
gttgaaaagtgtcacttaaaggaactggaggaaaggctgcagatcaggcatgccaaagaa
ctgaatgaataccaagaaaaagtagtaaaagaaaaccaagaaaagcttgatcaaatgcag
gaactccatgcatcagaagttcaagcttatggaaatcgtctgaaggaacttgaagtcaaa
gtttctgagctatctgatatgaggtgtaagttagaggttgaaatagccctgaaggaaaca
gaggtggaagaattaagaatgcttttggaggaaaccagatctcagcagcaggagactgtg
aggttcgaggttgaaaaggaaactgaggctttgagaaaagagattaatgatctaaaacat
caacttcagtctatgaatgatgagtatgaagttggacttgtggagctgagagctctaatg
agaattgataaagatcattgtatctctgagttagttggcagtcatgaagaagaaaccact
cttctccactctgagctaacatctttacagaaaaaagctctggatgttgaaaggggcctt
aaagaacaaattaggcagcttcagaatgactgtgataatcagattaaagcacaagagaaa
gaaaaagaagaaaaggaaagagcttttcaggagcagcaacaacattttaatactgttata
tgtggtcttcaggaagataaaaaacttctatcaagcaatctacagcaggagaaacagact
gttatgcagatttttaacaaggaaaaggaggacgccgtcaaagctgccctggcagatgcc
tttaaagactttgaacaccagaaggaggctattgaagaaaagctgttagaaaaggtcaaa
cagcttgagaatcagttgaaagaaaaaggctttacagaaagagaggttttgtcatctagt
catactgaggcacttgctgggaaaccactaagtattaatgcagatcttcaggaaaagtta
catgaagaaagggcatctttactgggacaacttgaacggcttgaaaaaacaaagaacgaa
gaaatgcagaaccttaaaacatcattgatagcagagcagcagacaaatttcaatactgtt
cttacaagagaaaaagtgaagaaggaacaaataataaacgagttaaatgataagctgaaa
aaggcagcacagcaacaggaaagggacaaagatttgatcgaaactctatcagaggacaga
gcacatttgctccaagaaaagaagcagctagaagaagaatttaacaagatgcgcagcagt
tcaatggtttcctcggcattcttttcttctgctaatccggtttgggacgatttggcggga
gcatgtgcagctgagccccctgctgactctgagaggctggtctcagttgcttccattagg
gaggatgggagaatagattctgcagtggaagccagcatgatggctgtacatgaaaatata
tctgtaatatctgaagaaaaacaaaggatcattttattagagaggactttacacatgaag
gaggaagagaacaaacgtctgaatcaacgactgatgtcacagagcatgtcttcagtatct
tcaagacattctgaaaaaattgccattagagattttcaggttggagatttggttcttatt
atcttggatgaacggcatgataattatgtcctttttactgttggcccaaccttatacttt
ctgcactcagagtctcttgcagcattggatctcaaaccagcatcaggtgctccacgaagg
ccttgggttcttggaaaagttatggaaaaggaatattgtcaggcaaagaaggctcagaac
cgatttaaagttccattgggcacaaagttctacagagtgaaagctgtaccctggaacaag
aaagtttaa
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integrated database retrieval system
