Acipenser ruthenus (sterlet): 117400275
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Entry
117400275 CDS
T07327
Name
(RefSeq) CLIP-associating protein 2-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117400275
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117400275
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117400275
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117400275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT_EZ
HEAT
Cnd1
HEAT_DAAF5
TOR1L1_N
RTP1_C1
IFRD
ParcG
TAN
Motif
Other DBs
NCBI-GeneID:
117400275
NCBI-ProteinID:
XP_033855845
LinkDB
All DBs
Position
3:complement(29633633..29783867)
Genome browser
AA seq
1621 aa
AA seq
DB search
MSITFYNSMEYFYQQVLQKDVSRRLQVGQELIDYLNDPQRSSDVEQDRPQLDATIDELAG
WVNSSNFKVTLLGIDLVSAFVDRLSERFKGYVGTVLPALIDRLGDAKDQVREQSLNLILK
LMDQAAPPMYVWDRLCTGFKHKNFRCREGVCLCLIQSLNTYGAKPLTLNKLMPFLCTLSG
DSNSQVRETAIMAVLDIYRHVGEKVRIDLSKRGLPAARLQAIFNKFDEARNSGNMILSCV
PDKSFEDDESVDGNRPSSAQPAFKVPAPKKPGNPSSSSRKPGTATGKLGGLSKEGAGVID
EDDFIKAFTDVPAVQIYSARDLEDNLNKIREILSDDKHDWDQRATALRKFRSLLIAGAAD
YDCFYQHLRLLDGAFKLSAKDLRSQVVREACITVAYLSFVLGNKYDHGAEAIVPVLFNLI
PNCAKVMATSGVSAIRFIIRHTHVPRLIPLITSNCTSKSVAVRRRGYDFLYLLLQEWQTH
SLERHVAVLVESIKKGIRDADAEARVEARKAYWGLRNHFPAETEALYNSLEPSYQRTLQS
CLKSSGSVASLPQSDRSSSSSQESLNRPLSKWSVPGASVAPGRVHSSMKVAPSPGSLQRS
RSDIDVNAAASAKSRQAGGAGRSTASGLPPGSYASLDDAPEKTEGAASEDGRVRSKLSAA
SGGIGSSQVDSRGRSRTKVVSQSQRSQSANPIGAGSRSGSPGRVLTSTALSTMSSGVQRV
LVSAGSAQKRSKIPRSQGCSRDSSPTRLSVAPSSHQQVFNGGSRGARGSRIPRPSMSQGC
SREASRESSRDASPVRSFQPLVSRHHSRSTGALYTADVLGAAGSGYGISQSSRLSSSVSA
MRVLNTGSDVEEALADALLLGDIRSKKKSARRRYETYGMYSDDDANSDASSACSERSYSS
RNGSIPTYMRQTEDVAEVLNRCASSNWSERKEGLLGLQNLLKNQRMLSRVELKRLCEIFT
RMFADPHSKRVFSMFLETLVDFIHVHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKA
LDITRESFPNDLQFNILMRFTVDQTQTPNLKPARKPYRYGAAIKLLPHCHRKTTRHTCSL
QEQIQVWNQAAQVKVAILKYIETLAMQMDPGDFVNSSETRLAVSRIITWTTEPKSSDVRK
CSGSVTMDVAEPQKTNIEDGGGASAYKAAQVVLISLFQLNTPEFTMLLGALPKTFQDGAT
KLLQNHLRNSGNTAQAPTGSPLTRPTPRSPASWSSPLTSPTNMSQNTLSPSAFDYDTENM
NSEDIYSSLRGVTEAIQNFSFRSQEDMNEPVKRDLKKDVDGEAGGMGSALPDLRGGGDAP
DTGRTALDNKTSLLNTMPLMHSSPRSRDYNPFNYSDSFSKCTLKEAMLDDDAEQFPEDSN
LDQSELVAELLKELSNHNERVEERKTALCELMKLIRDNLLVVWDEHFKTILLLLLETLGD
REHAIRALALRVLKEILNRQPARFKNYAELTIMKTLEAHKDPQKEVVRAAEEAASMLATS
ISPDQCVKVLCPIIQTADYPINLAAIKMQTKVIDRVSRETLNQLLPEIVPGLVQGYDNSE
SSVRKACVFCLVAIHAIIGEELKPHLGQLTGSKLKLLNLYIKRAQTGSGGSDPTSDISGQ
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgagtattacattttacaacagcatggaatacttttatcagcaagtcttgcagaaggac
gtgtcccggcggctccaggttggccaagagctaatcgactacctgaacgacccgcaaaga
tcttctgatgtggagcaggaccgaccacaactggatgcgaccatagatgagttagcgggc
tgggtaaactccagcaattttaaggtgactttactggggatcgatcttgtaagtgcattt
gtagaccggctgtcagaacgctttaaaggctacgtaggaactgttcttccagcgctgatt
gacagactgggcgatgccaaagaccaggtccgagagcagtcactaaatctcattctcaag
ctgatggaccaagctgctccaccaatgtatgtttgggatcgtttatgtactggttttaaa
cacaagaactttcggtgtcgagaaggagtgtgcctttgtctcattcagtccttaaatacg
tatggagctaaacccttaacgttaaacaagctgatgccattcctgtgcaccttatcggga
gattcaaacagtcaagttagagagacggcaataatggcagtattggacatttaccgacac
gtaggggagaaagtaagaatcgacctgagcaagaggggacttccagctgcacggttacaa
gcgatatttaacaagtttgatgaagcacgcaactctgggaatatgattttaagctgcgtt
ccggataaaagttttgaagatgacgagtccgtggatgggaacaggccctcgtcagcccag
cctgcgttcaaggtccctgcacccaagaagcctggcaatcctagcagcagctccaggaaa
ccaggcacagcaaccgggaagttaggaggtctgtcaaaggagggagctggggtaattgat
gaagatgactttatcaaggccttcactgacgtccctgcagttcagatttattccgccaga
gacctggaggacaatcttaacaaaatccgggaaatcctttcagacgacaagcatgactgg
gatcagagagccactgcgctcaggaagttccgttcgttgttgattgccggggctgcagac
tatgactgtttttaccagcatctgcgattgttggatggagcgtttaaactgtcagccaag
gacctgcgctcccaggtggttagggaagcctgcatcactgtcgcatatctttcctttgtg
ctgggaaacaagtatgaccatggggcagaagccattgtgcctgttttgttcaatctgatt
cccaactgtgccaaggttatggcaacgtctggtgtgtcagcaatcagattcatcatacgg
catacccatgttccaaggttgattcctctaataaccagtaactgtacatctaaatcagtt
gcagtcagaaggcgaggctatgatttcctttatttgttactacaggagtggcaaacacat
tccttagaaagacatgttgctgttctggtggaaagcattaagaaagggatccgtgatgct
gatgccgaggccagagtggaagcaagaaaggcttactggggtttgcggaatcacttccca
gcagagacggaggccctgtataactcactggagccatcctaccaaaggaccctgcagtcc
tgcctgaagagctctggcagcgtggcctcactcccccagtccgaccgctcctcctccagc
tcgcaggagagcctcaaccgtcctttatccaaatggtcagtaccgggagcctccgttgca
ccaggaagagtacattcaagtatgaaggtggccccgagcccaggatccctgcagcggtca
aggagtgacatcgatgtcaacgcggcggccagtgccaaatctcgacaggcaggtggagca
ggccgctcaacagcctcgggcctcccaccaggctcctatgcctccttagatgacgcacct
gaaaaaacagagggagctgcatcagaggatggtcgggttcgctcaaagctgtcagcagcc
tctggtgggattggaagcagtcaggtagactctcggggacgcagccggacaaaagtggtt
tctcagtctcaacgatcacagtcagctaaccccattggtgctggcagtcgctctggctcc
cctggcagagttctgaccagcacagcactcagtaccatgagcagcggagtccagagagtg
ctggtcagtgcgggctccgcacagaagcgcagcaagatccctcgcagtcagggctgcagc
agagactccagcccaacacgtctgtccgtagcaccgtcaagtcatcagcaagtcttcaat
ggcggaagtagaggagcgcgaggcagccgcattcctcgtcctagtatgagtcagggctgt
agccgggaggccagccgagaaagcagcagggacgcaagccctgtccgctctttccagccc
cttgtttccagacaccactccaggtccacaggtgccctctacacagctgatgttttgggg
gctgcaggttctgggtatggaatcagtcagtcaagcagactgtcctcctcggtgagcgcc
atgagggttctcaacacaggctctgatgtggaggaggcgctagcagatgcattgctgtta
ggagacataaggagcaagaagaagtctgcaaggaggagatatgaaacctatggaatgtac
tctgatgacgatgccaacagtgacgcatccagtgcctgttcagagcgttcctacagctcc
cgcaacggtagtatccccacctacatgcggcagactgaagacgtggcagaggtcctgaac
cgctgtgccagctccaactggtctgagaggaaggaggggctattgggactgcagaacctg
ctaaagaaccagagaatgctgagccgtgttgaattgaaaagactgtgtgaaatcttcact
agaatgtttgcagacccgcacagcaagagagtgttcagtatgtttcttgaaacactggta
gactttattcatgtccacaaagaggacctgcaggactggctgttcgtattgctaacacag
cttctgaagaaaatgggtgcagacttgcttggctctgtgcaggctaaggtccaaaaagca
cttgatattacgagggagtcgtttccaaatgatctccagtttaacattttgatgcgattc
acagtggaccagactcagacaccgaatttgaagcctgccaggaaaccttacaggtacggg
gcagctataaaattgcttccccactgccacagaaaaacaacgcgccatacttgctcactg
caggagcaaatccaagtgtggaaccaagcagcacaggtgaaagttgcaatactgaagtac
attgagacgctggctatgcagatggatcccggggactttgttaactccagtgaaacccga
ctggccgtctcgcgaatcatcacctggactactgagcccaagagttctgacgtcaggaag
tgttcaggcagcgttaccatggacgtcgcagaaccccaaaaaacaaatattgaggacggc
gggggggcatctgcatataaagcagcgcaggttgtgttgatttctttgttccaactgaac
accccagaattcactatgctgctcggagctttaccaaaaactttccaggatggcgcaacc
aaacttcttcagaaccatcttcggaacagcggaaacactgcccaggctcccacaggtagc
ccattgactcgacctacaccacgctccccagccagctggtccagtcccctcacctctccg
acaaacatgtctcagaacaccttgtcaccaagtgcatttgactatgatacagaaaacatg
aactcagaagacatctacagctctctccgtggagtgacagaagccattcagaacttcagc
tttcgcagtcaggaagacatgaacgagccggtcaaaagggacttgaaaaaagacgtcgac
ggagaagctggtgggatgggaagtgcccttcctgacttgcgaggtggtggtgacgcacca
gacacaggccgtactgccctggacaacaagacttcactcctcaacaccatgcctttaatg
cactccagcccacgctcccgggattacaaccccttcaactactctgactcttttagcaag
tgtaccctgaaggaggccatgcttgacgacgatgcagagcagtttccagaagacagtaat
ctggaccagtcagagctggtggcagagctgttgaaagagctgtccaatcacaatgaacgc
gtggaggagcggaagacggccctgtgtgaactcatgaagctcatccgggacaacctgctt
gtggtgtgggacgaacacttcaaaacgatcctcctgctgctgctggagacgcttggggac
agagagcacgctatcagagccttggctttgcgagtgttgaaagaaatcctcaacagacag
ccagcgagattcaagaactacgcagagctgaccatcatgaagactctagaggcacataaa
gatccacaaaaggaggtggtacgagctgctgaagaagccgcttcgatgctggcgacatcc
atcagtccagatcagtgtgtaaaagtgctctgccccatcatccagacagcagactacccc
ataaacctggctgctatcaagatgcaaacgaaagtcattgacagagtctcgagagagacc
ttaaaccagctcctcccagagatcgtcccaggtctagtacagggctacgacaattcagag
agcagtgttcgcaaggcctgcgtgttctgtctggttgctatccatgcaatcattggtgaa
gagcttaaaccccatctcggccagctcactggcagcaagttgaaattgttgaacctgtac
attaagagagcacagacagggagtggtggcagcgacccgacgtctgacatctccggccag
agctag
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