Acipenser ruthenus (sterlet): 117400301
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Entry
117400301 CDS
T07327
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117400301
Membrane trafficking [BR:
arut04131
]
Protein recycling
Others
EARP complex
117400301
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
117400301
NCBI-ProteinID:
XP_033855934
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All DBs
Position
3:93685221..93860005
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AA seq
988 aa
AA seq
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MQKIKSLMTRQGPKSPQESLSDLSPVENIRIPSKEELREMREQPIDPQAEQEIINSIEDV
YFSNDSFDIVQHELEKLPPVLNLQEIEEYRDKLKKQQAAVSKKVADLILEKQPSYVKELD
RVTSLQANLQLGAVICTNARRQLGFAKEDFTQASLGLLANQRKRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKSFDINHYTKVQQAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLSDLCKALWEVMLSYHRTMEWHEEHDNEETVPASDG
SSTDGTEESNFDRSYVKKKLEHGLTRIWQDVQLKAKAYLLGTDMSNFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIKKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFSI
VQLHEFKFMGQSRSPSVSPSKHASTASTATMSLFEQYHNGGNPFEMQTDSKDDETEDVLA
SNGYESDELEKCAYQDYDSDSDVPEELKRDYVDEQTGDAPVKSVSRDTLRSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCMSQLFDYYLYAVYTFFGRNDMQ
VPNPSVSVPGKEQSTSRQTTVCSYESSGLGLISSRLRTTLNRIQEGLIDLEAAPETTGSH
VAGEERKEKVPSPHLSQLVVLTASGTLYGLAERVVATESLVFLAEQFECLQPHLDTMIPA
AKKPFLQQFYSQTVSTTSELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNIYV
DVLLKEFEQFNKRLGDVSRQVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRAL
MQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSTKQLTNLV
SVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtcactcatgacccgacagggtcccaaaagtccccaggaaagtttg
agtgacctcagtcctgtggaaaacattaggattcccagtaaggaagaactacgggaaatg
agagagcaacctatcgatccacaagcagaacaagagataattaatagtattgaggatgtt
tacttctccaatgattcttttgacattgtgcagcatgagctagagaaacttcctcctgtt
cttaatcttcaagaaatagaagaatacagagataaactgaagaagcaacaagcagctgtg
tcaaagaaggtagcagatctaatcctggaaaaacagccttcatatgttaaggaattggac
cgtgttacttcactgcaagcaaaccttcagttgggagcagtcatctgcacaaatgcaaga
aggcaactcggttttgcaaaagaagattttacacaagcaagccttggccttcttgccaat
caaaggaagaggcagttgctgactggactgctgaaatctctgagaacaataaaaacactg
caaaggactgatgtaagattaagcgaaatgttagaggaggaagattatcctggagctatc
cagctgtgtttggaatgccaaaaggcagccagcacattcaaacactacagctgtataagt
gaattaaattcaaaactgcaagacactcttgaacaaatagaggaacaattggatgtagcc
ttgtcaaaaacctgcaagagctttgatatcaatcattacaccaaagttcagcaggcatac
acgcttctgggaaaaactcaaactgcaatggaccaactgcatatgcacttcacccaagca
attcacaacacagtgttccaggtggttctcggttatgtggagctgtgtgctgggaatgct
gacaccaagtttcagaagatgcagtacaaggacctctgtacacatattactctagacagc
tacattccttgcctttctgatctctgcaaagccctctgggaagtcatgcttagctaccat
cgaactatggagtggcatgaggagcatgacaatgaagagacagttccagcctcagatggc
agcagcacggatggcacggaggagtccaactttgatcgcagttatgtgaaaaagaaatta
gagcatgggctgacccgcatctggcaggacgttcaattaaaagccaaagcctatttgctt
ggaacggatatgtccaactttaagtatgatgacttcatttttgtactggatattatcagc
aggctgatgcaagtcggagaggagttttgtggcagcaagtcggaggttttgcaagagtct
attaaaaagcaaagtgtgaactatttcaaaaactatcacagaacacgcctcgaggagcta
agaatgttcttagaaaatgaaacctgggaactttgccctgttaagtcgaacttcagcatt
gtgcagctgcatgaattcaaattcatgggccagtcacgctctccttcagtatcccctagc
aagcacgcctccactgcatccacagcgacgatgtccctgtttgaacagtaccataatgga
ggaaatccatttgagatgcagacagacagcaaagatgacgaaacagaagatgtcttggct
tctaatgggtatgagtctgatgaattggagaagtgtgcctaccaggattatgacagtgac
agtgatgttcctgaagaactcaagagagactatgtggatgagcaaactggagacgctcct
gtaaaaagtgtgtctcgagataccctcaggagcaggaagaagtcagactacagccttaat
aaggtgaatgcacccatcttgacgaacactaccttgaatgtaatcaggcttgttgggaag
tacatgcagatgatgaatatcctgaaaccaatagcgtttgatgtgatccactgcatgtcc
caattatttgattactacttgtatgcagtctacacattctttggccgaaatgatatgcaa
gtgcctaatccgtcagtttctgtgcctggcaaagaacaaagcacttctaggcagacgaca
gtctgctcgtatgaatcatccggacttggtctaatcagcagtagactccgaacaactctg
aacagaatacaagagggtcttattgacctggaggccgcaccagaaactactggcagccat
gtagctggtgaagagagaaaggaaaaggtgccaagcccacatctcagccagttggtggtt
ttaactgccagtggaacactgtatggacttgcagaaagagtggttgcaacagaatccttg
gtgtttctggctgagcagtttgagtgtcttcagcctcatcttgacactatgattcctgca
gcaaagaagccctttcttcaacagttctattcccagactgtatcaactaccagtgaactg
cgaaaacccatttactggattgtggctgccaaagccatagattatgaacagatgctgcta
cttatggctggagttaaatgggacataaaagaaattatgtctcaacacaatatatacgtg
gatgtccttttaaaggagtttgagcagtttaacaagagacttggagatgtttccagacag
gtgcgcatccctttgcctgtgtctaatgtactttgggaacactgcattcgactggctaac
agaactcttgtggaaggctatgctaatgtcaagaaatgcagcaatgaaggacgtgccctg
atgcaactggactttcagcagtttttaatgaagctggagaagctgaccgacatcaggccc
attccagataaagagtttgtggagacctacattaaagcctactatctgactgagaacgat
atggaacagttcatcaagaaccacagggaatattccaccaagcagctgaccaatctggtg
agtgtttgtctcggatcccacataaacaagaaggcgagacagaaactgttagcagctatt
gatgacatcgacagaccaaaaagatag
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