Acipenser ruthenus (sterlet): 117400490
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Entry
117400490 CDS
T07327
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03030
DNA replication
arut03410
Base excision repair
arut03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117400490 (zgc:110269)
03410 Base excision repair
117400490 (zgc:110269)
03450 Non-homologous end-joining
117400490 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arut03032
]
117400490 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
arut03400
]
117400490 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117400490 (zgc:110269)
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117400490 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
117400490 (zgc:110269)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117400490 (zgc:110269)
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117400490 (zgc:110269)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
117400490
NCBI-ProteinID:
XP_033856426
LinkDB
All DBs
Position
3:complement(35287898..35307781)
Genome browser
AA seq
349 aa
AA seq
DB search
MGIVKLAELIRNVAQDAISYKTISDYSGKKIAVDASIVLFQFRTAAPEIRNRDGSHLSPL
VGLFYRTLHFLENDIRPVYVFDGLPPEQKVALLERRAEAGGYTRTQRPVSNQVQDCQKIL
KLLGVPYLQAPSEAEALCAELVKCGEVDGVASEDMDVLPFGSSLLIRQIGTKEHRGVMEY
SLPKVLKTLGLTHEQFVDLCILLGCDYCEKIGGLGPKRALALIQQHKTIEDVLLNINRTT
HPVPENWKYLDARKLFLDPEVANQTSRSLSWEEPDEEGLVNFLSHEKYVKEERIRRRMEK
FRRVREDRKQRGSGEGKQHQTRMDDFFRVTRSRQAPDAVDQTVSKKSKF
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggtattgtgaaactggcagaattaatacgcaatgttgcgcaggatgcgatctcttac
aaaacaataagtgactattcaggtaagaagatcgctgtggatgcctccattgtgctattt
cagttccgcacggccgcccctgagatccgcaaccgcgatggatcacacctcagccccctg
gtcggtttgttctaccgcacgctgcatttcttagagaatgacatcaggccagtctatgtc
ttcgatggactcccgcctgagcagaaagtggcgctgctggagaggcgagctgaggctgga
gggtataccaggacacaaaggccagtctccaaccaagtacaggactgccagaaaatacta
aagctgttaggagtaccatatctccaggcccccagtgaagctgaagctctgtgtgcagag
ttggtgaagtgtggtgaagtggatggagtggcttcagaggacatggatgttctgccgttt
gggagctcactgctaatccgccagatcggtaccaaagagcacaggggtgtgatggagtac
tccttgccaaaggtgctgaagacactgggactcacacacgagcagtttgtagatctgtgt
attttgcttggctgtgattattgtgagaagattggcggcctgggaccgaagcgagcactg
gcccttattcagcaacacaaaaccattgaggatgttcttctaaatatcaaccgaacgaca
cacccagtccctgagaactggaaataccttgacgctcgcaaactcttcttggatcccgag
gtagctaatcagacaagccgatcgctaagctgggaggagccagacgaggaagggctggtg
aacttcttgtcacatgagaaatatgtcaaggaggaacgaataaggcgcaggatggagaag
tttcgtagagtgcgggaggacaggaagcagagagggtctggtgaggggaaacagcatcaa
acacgcatggacgatttcttcagagtgacacgaagcagacaggcaccagatgctgtggac
caaaccgtcagcaagaaatcgaaattctag
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