Acipenser ruthenus (sterlet): 117401046
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Entry
117401046 CDS
T07327
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117401046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117401046
03036 Chromosome and associated proteins [BR:
arut03036
]
117401046
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117401046
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117401046
PBAF complex
117401046
GBAF(ncBAF) complex
117401046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
117401046
NCBI-ProteinID:
XP_033857338
LinkDB
All DBs
Position
47:complement(4028260..4039777)
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AA seq
515 aa
AA seq
DB search
MAGRGGFQAAVTGGSGVGPGSGPQGPGPALGMGPGTPTGRMGPAPGAQNPLYRSPMAGPG
YPRPGMPPGSRMTPQGPSMGPPGYGASPVSRPGMPVMDQSRKRPAPQQLQQVQQAAQNRN
QHAKKKKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKADAEDGEGTVASWELRVEGRLLEDTAVSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAAL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcggtgggttccaggcggcggtgacgggcgggagtggtgttggacctgga
tcggggccgcaaggaccgggaccggcgctagggatgggaccggggactcccaccggcagg
atggggcccgcgccgggggctcagaaccccctttatcgctccccgatggcggggcctggg
tacccgcgtcctgggatgccccctggcagcaggatgaccccccagggcccttccatgggc
ccccctggctacggagccagtcccgtgtcccggcccggaatgccagtgatggatcagtcc
cggaagagaccagctccacagcagctccagcaagtacagcaggctgcgcagaaccgcaac
caacatgcaaagaagaagaagatggctgataaagttctacctcagaggatcagagagcta
gtcccagaatcccaggcctacatggatctccttgccttcgagaggaagctggaccaaacc
atcatgcgcaagagactggacatccaggaggccctcaaacgccccatcaagcaaaagaga
aagctgcggatcttcatctcgaacacgtttaaccctgcgaaggctgacgctgaggacggg
gaggggacggtggcctcctgggagctacgtgtggaggggcgcctcctggaggatacggcc
gtatcgaagtacgatgccaccaagcagaagcggaaattctcctcattcttcaagtctctg
gtgatcgagctggacaaggatctgtacgggccagacaaccatctggtcgagtggcacagg
actgccacgactcaggagacggatggatttcaggtgaagagaccgggagacgtgggtgtg
cggtgcactgtgctgctgatgcttgactaccagcccccccagttcaagctggacccccga
ctggctcgcatgttggggatccacacgcagacccggcccgtcatcatccaggccctgtgg
cagtacgtgaaaacacacaaactgcaggacccccacgagagggagttcatcaactgcgac
aagtacctccagcagattttcgagacccagaggatgaagttctccgagatcccccagcgg
ctgcacgccctcctcatgcctccggagccaatcatcatcaaccatgtgatcagtgttgac
cccaatgaccagaagaagacggcctgctacgatatcgatgtggaggtggacgacactctg
aagactcagatgaactcgttcctgctgtccactgccagccagcaggagatcgcagcgctg
gacaacaagatccacgagacaatagagaccatcaaccagctgaaaacacagagggagttc
atgctgagctttgcccgagaccctcagggattcatcaatgactggctgcagtcccagtgc
cgagatctcaagaccatgactgacgtcgtggggaatcccgaggaggaacgtcgggctgag
ttctacttccagccctgggctcaggaggccgtctgcagatacttctactccaaggtccag
cagaggaggcaggagctggagcaagctctgggcatcaggaacacatag
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