Acipenser ruthenus (sterlet): 117401321
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Entry
117401321 CDS
T07327
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut02010
ABC transporters
arut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117401321
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117401321
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117401321
Transporters [BR:
arut02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117401321
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Phage_tail_terminator_7
Motif
Other DBs
NCBI-GeneID:
117401321
NCBI-ProteinID:
XP_034767645
LinkDB
All DBs
Position
39:complement(5878922..5933576)
Genome browser
AA seq
2257 aa
AA seq
DB search
MGFWIQLGLLLWKNFTYRRRQTIQLGIELLWPLFLFFILISVRWSHPPFEQSECHFPNKP
LPSAGTLPWIQGIICNVNNPCFRYPTPGETPGLVGNFNSSILSRLLADTQKILSHSSSQS
LPGEFQQLLLALRSLRERREAWPKSSVREFLRQNETFSQFLLVNASLPQNVVDQLLKAQL
NLQVVSLAGSGLRLQEIVCNASLLSEYLLPADGAPLSLLQPSLCAVPASTLQTAERVFLS
QLDYSRLLTERLSSDTGSLLEVTEAVNSFTEGLGAILLELSARSSFSQLSEELSRLSRGS
TTGSPRDQFRAVSRIVCGHPEGGGERIPSLNWYEDNDIKAFLGRNDTEEREVQLDNNTTP
YCRDLIRGLESNPLSRIIWRGIKPLFIGKLLYTPDTPATRSIMKEVNRTFEDLSVLEEVR
GAWQELGPRIRTFMESSLEIQMLQDLLKTPEVAGLVDLRLADTSWTAARIAHFLSTRPPE
AGSNSTWRDTYREVDEIVTTLSQFIQCVSLNKLEAVPTEERLVSRALELLEERQFWAGIV
FQLQDVPPPNLPPHLTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFSDLRYVWGGFVYVQ
DLVEQAVTRVLSGGRAPRTGLYLQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMII
KGVVHEKEARLKETMRIMGLSNGTLWISWFISSLLPFLVSAALLILILKRGDILPYSDPA
VIFLFLATFATATILQCFLISMLFSRANLAAACGGIIYFSLYLPYVLCVAWRDHVTFTMR
IFASLLSPVAFGFGCEYFSLYEEQGVGIQWSNLGSSPVEGDRYSFSTSILLLLVDAVIYG
LATCYIEAVFPGQFGIPKPWNFLFLRSYWFGESLSDVPLSIPPTNKEEVCLEAEPSHLPL
GVSIQNLVKVYSSGAKLAVNGLNLNFYQGQITSFLGHNGAGKTTTMSILTGLFPPSAGTA
YIQGKDIRTEMDSIRKTLGMCPQHNVLFDILTVEEHVWFYGRLKGLTEEEVTAELGRMLE
DVGLPHKRREQTKNLSGGMQRKLSVAIAFIGESKVVILDEPTAGVDPYSRRGIWDLLLKY
RKERTIILSTHYMDEADLLGDRIAIISQGRLCCCGSPLFLKTQLGMGYYLTAVKRDSETR
PTNSASAGSIALARGKKGDGESDRSSDTGLGSEQCSEISSADVPGLSALVRRWVPGARLV
EDVGREVVFNVPYRAVRDGSLADLLRELDCRQGELGVSSYGVSDTSLEEVFLKVAEETGV
DADPADEVLPEQRDPVPADPLETDSDTGKKVPRKQEAQETDLLSREGKGSAPLLGWALTL
QQLRALFIKRLLYARRSRRGFLAQIVLPAVFVCVALLFTLIVPPFGKYPPLELQPWMYGD
QFTFFSDDAPEDPGSGALLSALLGSPGFGTRCMAGKERERGESECEGGVGEFVIPPVPPS
VMELLSAGNWSLDNPSPSCECSSEETRRMLPECPEGAGGLPPPQVKRITGDILQNLTGRN
LSDYLVKTYSQILRKSLKTKKWVNEFRYGGFSLGARSSQVLPSVQQVNKTVREIRAYLQL
TEGSSLDRLLGNLTRFITGLETQSIVKVWFNNKGWHAMASFINIINNGVLRASLPPGTDP
RLYGITAVNHPLNLTREQLSEVALMNTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKA
KHLQFVSGVKPILYWLANFSWDMCNYTVPATLVVIIFICFQQKSYVSPTNLPALVLLLFF
YGWSITPLMYPASFLFSIPSTAYVVLTSLNLFIGINGSVATFVLELFTDKNLNDVNNILK
KVFLIFPHFCLGRGLIDMAKNQAMADAFQRFGASQTLSPLSWDFVGKNLFAMAVQGLVFF
LFTILLQYKFFINFRPFSVKLPPVGQEDEDVARERERVKSGRATGDILEVKELTKVYRLQ
RKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTTVSSGEAFLNGCSVLTNLQAV
HQHMGYCPQFDAINDLLTGREHLEFYARLRGVQEEDVSKVALWGIRKLGLVQYAERPAGK
YSGGNKRKLSTAISLIGAPPVVFLDEPTTGMDPKARRFLWTCILNVIREGRSVILTSHSM
EECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRLSGFCREPCPVEEFMSSAFP
GIELKEHHQNVLQYQLPSGACPLARLFRVLSEQRERLGIGDYSVSQTTLDQVFVNFAKDQ
SDEDQLKEVVVNGVESSKDSKRITLFLEDASVEESRL
NT seq
6774 nt
NT seq
+upstream
nt +downstream
nt
atgggcttctggatacagctggggctcctgctgtggaagaacttcacctatcgcaggcgg
cagactatccagctggggattgagctgctctggcccctgtttctcttcttcattctcatc
tctgtgcgctggtcacaccctccatttgagcagagtgaatgtcacttcccaaacaagccc
ctaccctcggctggcacccttccctggatccaggggatcatttgcaatgtgaacaacccc
tgcttccgctaccccacacctggagagacccctggcctggtgggcaacttcaacagctcc
atactctcgcgtcttcttgctgacacgcagaagatcctctcccactccagcagccaatca
ttgcccggggaattccagcagctcctattggctctccgcagcctgagagagagaagggaa
gcctggccaaagtcgtctgtgagagagttcctccgacagaatgaaaccttctcccagttc
ctgttggttaatgccagcctccctcagaatgtggttgaccagttgctgaaggcgcagctg
aacctgcaagtggtgtccctggccggctcaggcctgcgtctccaggagattgtgtgcaat
gcttccctgctcagcgagtacctgctccctgctgacggagcgcctctgtcccttctgcag
cccagcctgtgcgctgtgcccgcctccacactgcagacggcagagcgggtctttctgtct
cagctcgactacagccggctgctcaccgagagactgagctccgatactgggagcctcctg
gaagtgacagaagctgtgaactccttcactgagggattgggggccattctgttagagttg
tcggcgcggagcagtttctcccagttgagtgaggagctgagcaggctgtctcgagggagc
accaccggctctccgcgtgaccagttcagagcggtgtcccgcatcgtgtgtggacacccc
gaggggggaggggagcgcatcccctcactgaactggtacgaggacaacgacatcaaggcc
ttcctgggacgcaatgacactgaagagagagaggtgcagctagacaataacaccaccccg
tactgcagggatctgatccgcggcctggagtcgaacccgctctcccgtatcatctggcgt
gggatcaaacctctgttcattgggaagctgctgtacacacctgacacgccagccacacgc
agcatcatgaaagaggttaaccggacgttcgaggacctgtcggtgctggaggaggtgaga
ggagcttggcaggagcttggaccacgaatcaggacctttatggagagcagcctggagatc
caaatgctgcaggacctgttgaagaccccagaggtcgctggccttgttgaccttcgcctt
gcggacacttcctggactgccgcccgcattgcccacttcctgtccactaggccccctgag
gctggttccaactctacctggagagacacgtaccgggaggtggacgagatagtgaccact
ctctcccagtttatccagtgcgtgtccctcaataagctggaggccgtccccacagaggag
cggctggtgtcccgggccctggagctgctcgaggagaggcagttctgggcggggatcgtc
ttccagctacaggacgtcccgcccccaaacctgccgccccacctcacctacaagatccgc
atggacatcgatgatgtcactcgaaccaacaagatcaaagaccggttctgggaccccggg
ccagcagcggaccccttcagtgacctgcgctatgtgtgggggggctttgtgtatgtgcag
gacctggtggagcaggctgtgacgagggtcctgagcgggggccgggcccctcgcactggg
ctgtacctgcagcagatgccctatccctgctacgtggatgatgtgttcctgcgggtgctg
aaccgctcgctgcccctcttcatgaccttggcctggatctactcggtggccatgatcatc
aagggtgtggtgcacgagaaggaggcacgactcaaagagaccatgaggatcatgggcctg
agcaacggtactctgtggatcagctggttcatcagcagcctcctgcccttcctggtcagc
gcagccttactcattctcattctcaagcgaggagacattctgccctacagtgacccggca
gtgatcttcctcttcctggcgaccttcgccacggcgaccatcctgcagtgcttcctgatc
agcatgctgttctcgcgagcaaacctggcggcggcatgcggtggcatcatctacttctcc
ctgtacctgccctacgtgctgtgtgtggcctggagggaccacgtcaccttcacaatgagg
atattcgctagcctgctgtctcctgtagccttcgggtttggctgtgagtatttctctctg
tacgaggagcagggcgtgggtatccagtggtctaatctgggttccagccctgtcgagggg
gatcgctacagcttcagcacctccatcctgctcctgctggtggacgcagtgatctacggc
ctggctacctgctacatagaagctgtcttcccgggtcagtttgggattccgaagccctgg
aatttcctgtttctccggagttactggtttggggagtctctctcggatgttcccctgtca
attccacccaccaacaaggaagaagtgtgtctggaggctgagccaagtcacctccccctg
ggagtgtccatccagaacctggtgaaggtgtacagctccggggccaagctggccgtcaac
gggctgaacctcaacttctaccagggccagatcacctccttcctggggcacaacggggca
ggcaagaccaccaccatgtccatcctcactggattgttccccccctctgctgggacggcc
tatatccagggaaaggacatccgcacggaaatggactccatccggaaaaccctgggaatg
tgccctcagcacaacgtcctctttgacattctgaccgtggaggagcatgtctggttttac
gggcgtctgaagggcctcacagaggaggaggtgacggcagagctggggcgcatgctggag
gatgtggggctccctcacaagcgcagggagcagaccaagaacctctcaggtggcatgcag
aggaagctgtcggtagccattgccttcattggggagtccaaggtggtcattctggacgag
cccacggctggggtggacccttactctcgcaggggcatatgggacctgctgctcaagtac
cgcaaggagcgcaccatcatactctcgactcactacatggatgaggcggacctgcttggg
gatcgcatcgctatcatctcccagggacgcctgtgctgctgcggctctcccctcttcctg
aagacccagctgggaatgggatactacctgactgctgtgaagagagactcggagacgaga
cccacaaacagtgccagcgctgggagcatcgccctcgccaggggcaagaagggtgacggt
gagtctgacaggagttcagacacaggactgggcagtgagcagtgcagtgagatcagctca
gctgatgtgccaggcctgtctgctctggtgcggcgctgggtgccgggggctcggctggtt
gaggatgtgggcagggaggtggtgtttaatgtcccgtacagagcggtccgggatggcagc
ctggcagacctgctgagagagctggactgcaggcagggagagctgggcgtgtccagctac
ggggtctccgacaccagcctggaggaggtcttccttaaggtggcggaggagaccggggtg
gatgcagaccctgcagacgaggtgctcccggagcagagagaccccgtcccagcagacccc
ctggagacggacagcgacactggaaagaaagtgccacgcaaacaagaggcacaggagaca
gacctcctgagcagggaggggaaaggctcggcccccctgctcggctgggctctgaccctg
cagcagctgcgcgctctcttcatcaagaggctcctgtacgcccgccgcagccgacgagga
ttcctcgcccagatcgttctgccagctgtgtttgtgtgcgtcgccctgctcttcaccctc
attgtccccccgtttgggaagtacccccctctggagctgcagccctggatgtatggagat
cagttcaccttcttcagtgatgacgccccagaggacccaggcagtggagccctgctcagc
gccctgctaggctcgcccgggtttggaaccaggtgcatggcagggaaggagagggagagg
ggggagtctgagtgtgagggtggagtgggagagtttgtcatacctcctgtccctccctct
gtcatggagctgctcagcgcaggaaactggagcctggacaacccctccccttcctgtgag
tgcagctcggaggagacgcgcaggatgctgcccgagtgtccggagggagctggggggctg
ccccccccacaggtcaaaaggatcactggagacatcctgcagaacttgacaggacgcaac
ctctcagactacctggtgaagacctactcccagatcctcaggaaaagcttgaaaaccaag
aaatgggtgaatgagttccggtacggtggattctcactgggggcccgcagctctcaggtt
ctgccatcagtccagcaggtgaacaaaaccgtgcgagagatccgggcttacctgcagctc
actgaggggagttctctggacagactgctgggaaacctcaccaggttcataactggcctg
gagacacagagcattgtgaaggtttggttcaacaacaagggctggcacgccatggcatcc
ttcattaacatcatcaacaacggggtgctgcgagctagcctgccccctggcacagacccc
cgcctctatgggataactgctgtcaaccaccccctgaacctgaccagggagcagctcagc
gaagtggcgctgatgaacacctctgtggatgtcctggtgtcgatctgtgtgatcttcgcc
atgtccttcgtgccggccagctttgtgctcttcctgatcgaggagcgggtcagcaaggcc
aagcacctgcagtttgtcagcggggtgaagcccatcctctactggctggccaacttctcc
tgggacatgtgtaattacaccgtgcctgcgactctggtggtgatcatcttcatctgtttc
cagcagaagtcctacgtgtctcccaccaacctgcctgctctggtgctgctgctgtttttt
tatggctggtccatcactcctctgatgtacccggcctccttcctgttcagcatccccagc
accgcctatgtggtgctcacctcactgaacctcttcatcgggatcaatggcagtgtggct
accttcgtcctggagctcttcacagacaagaatctgaacgacgtcaataacatcctgaag
aaagtcttcctgatcttcccccacttctgcctgggccgggggctcatcgacatggccaag
aaccaggccatggccgacgccttccagagattcggtgccagtcagacactgtctcctttg
tcgtgggacttcgttgggaagaacctgtttgccatggccgtgcaagggctggtcttcttc
ctcttcacaatcctgctgcagtacaagttcttcattaacttcaggcccttctctgtgaag
ctgcccccagttggtcaggaggatgaagacgtggcccgagagagagagagggtcaagagc
ggccgagcgacgggggatatcctagaggtgaaggagttgaccaaggtgtataggctgcag
aggaagcccgcggtggacaggctgtgtctggggatcccacgaggggagtgtttcgggttg
ctgggtgtcaatggagctgggaagacgtccacattccgcatgctgactggagacaccaca
gtcagcagtggagaggccttcctgaacgggtgcagtgtcctgacgaatctgcaggctgtg
caccagcacatgggatactgcccgcagttcgacgccatcaatgacctgctgaccggccga
gagcacctggagttctacgcacgactgagaggtgtgcaagaggaggacgtgagcaaggtg
gcgctgtgggggatcaggaagctgggtctggtgcagtatgcagagcgccctgctgggaaa
tacagcgggggaaacaaacgcaagctgtccacagccatctccctgattggagccccgcct
gttgtcttcctggatgagcccacgaccggcatggatcccaaggccaggagattcctgtgg
acctgcatcctgaatgtcatcagagagggccgctccgttatcctcacctcccacagcatg
gaggagtgtgaggctctctgcacccgcatggctatcatggtgaacgggcggttccgctgc
ctgggctcagtccagcacctcaagaacaggttcggagacggctacaccatcatcctgcgt
ctctctgggttctgtcgggagccctgcccagtggaggagttcatgagctcagcattcccc
gggatcgagctgaaagagcatcaccagaacgtgctgcagtaccagctgccctccggtgcc
tgccccctggcccgcctcttcagagtcctgtccgagcagagagagaggctgggcatcggg
gactactcagtctcccagaccaccctcgaccaggtgtttgtaaactttgccaaggatcaa
agcgacgaggaccagctgaaagaggtggttgtgaatggggtggagagctccaaggactcc
aaacgcatcaccttgttcctggaggacgctagtgttgaggagagccggctgtga
DBGET
integrated database retrieval system
