Acipenser ruthenus (sterlet): 117401336
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Entry
117401336 CDS
T07327
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04217
Necroptosis
arut04620
Toll-like receptor signaling pathway
arut04621
NOD-like receptor signaling pathway
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117401336
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117401336
04621 NOD-like receptor signaling pathway
117401336
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117401336
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Gene cluster
GFIT
Motif
Pfam:
TRIF-NTD
TIR_2
Motif
Other DBs
NCBI-GeneID:
117401336
NCBI-ProteinID:
XP_033857826
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Position
40:complement(6474907..6481267)
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AA seq
738 aa
AA seq
DB search
MADKRDRSPTLEDAFKALSNVGKDRLTSLSLKLECSVSDTDKLVYAMVLMNLRRRQEART
ELQKLGHNQTAVYLAGMTAKDSQHSASTSKLLSGQADFLVDVARIFKVLVAERLCDESLR
DNAYLIAMEACKNAGGKCKVSLEHLKVESRTECDPHLELTAPDESGGAALKSSAGLFSWV
SGMLRRSPAINIHNSKSQSRTEVKSSPSSLQSLTESSVSFASHLEISQSPTVPFLTAGTN
KALSHSSVDSASVGSTGTGQGAASTNLVLSSVDIQPNPVPMPPVQGEEEQNKSIHPGAQI
QDSNCNIDSSVSTGQSSAEQPSCSEVKQVQCTADPVSDQLVTSKTGLQEESQEPSALPEK
VSSEEEKTSPPSIPPKTLVEESHPETKPSEPPRNTTPAPTAEQEDETENKFFSFVILHAR
EDADNAIRVQETLKQLGAGEGATFSVDFEIPGKSPLTCIQDAVNNSAFTLILLTTNFNSH
WAQYKTNSVLMDSIERRHKYNTVIPFLPRRHCLPRESIPFALKCLIPMEEIKSFFPKKVK
KTFNQKMIENQRALWSQEQKIKEQKEKEEQLKDQNKNYELLQRAIVNVQLQQYMALQYTQ
MLQGIIPPQQLPGDPNPQAQYPPHLNQMPPGHPHCPLPGQPAFNPAGLPFPGGMMPNFAA
QFPPQQFFPFPTTLQQQAQDQNVGSNPGAPQPCPPPNIIQIHHASNIQIGNQAQMSVSAA
SEEDEDEEDEEAVQESTG
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgggatcgtagcccgaccttggaggatgcatttaaggccctgtccaac
gtagggaaagacaggctgaccagcctcagtctgaagctggaatgttctgtctcagacaca
gacaagcttgtctatgccatggtgctgatgaatctgaggcgcaggcaggaagcccgcact
gagctccaaaagctgggccacaatcagacggctgtttacctggctggcatgacagccaag
gacagccaacactcggcctcaaccagcaaactgctctccggccaagctgattttctcgtg
gacgtggctcggatctttaaagtcttggtggctgagaggctctgtgacgagtcgctgcga
gacaacgcctacctgatcgcgatggaggcgtgcaaaaacgcaggtgggaaatgcaaggtg
agcctagagcatctgaaagtggagtcgaggactgagtgtgacccccacttggagctaaca
gccccggatgagagtgggggggcggctttgaaatccagtgctggactcttctcttgggtc
agtgggatgctaaggagaagcccggccataaacattcacaacagcaaaagtcagtcaagg
actgaagtcaagagctctccgtcttctctgcaaagccttacagagagttctgtttccttt
gctagtcacctggagatcagccagtctcccactgtgccgtttcttactgctgggacaaat
aaagcgctttcacactcttccgttgacagtgcatctgtcggcagcacagggacaggtcag
ggggctgccagtacgaatcttgttttatctagcgtggacattcagccaaaccctgtaccg
atgccacctgtacaaggggaagaagaacaaaacaaaagcatacatccaggagcccagatt
caggatagcaattgtaatatcgactcttctgtgtccactggacagtcctctgcagaacag
cccagttgtagtgaagtgaaacaggtgcagtgcactgcagatccggtaagcgatcagctt
gtgacttcgaaaaccgggctacaggaggagagccaagagccgtcagccttaccagagaag
gtttcttcagaggaggaaaaaacctcacccccaagcatcccaccaaagaccttggttgag
gagtcgcaccctgaaacgaaaccttcggagcccccaaggaacacaaccccagccccgacc
gcagagcaagaggatgagacggaaaacaagttcttctcgtttgtgattctccacgcccgg
gaggatgcagacaatgccatcagggttcaggagactctcaagcagctgggtgctggggaa
ggagccaccttcagcgtggacttcgaaatccctgggaaaagccccttgacctgcattcag
gatgccgtcaataactctgccttcacgctcatcctcctgaccaccaacttcaactcccac
tgggcccagtacaaaaccaactctgtgctgatggactccatcgagcggcgccacaagtac
aacacggtcatcccctttctgcccaggagacactgcctgcccagagagagcatccctttc
gcactaaagtgcttgatccccatggaggagatcaaaagcttcttcccgaaaaaggtgaag
aagaccttcaaccaaaaaatgattgagaatcagagggccctctggagccaggagcaaaaa
atcaaagagcagaaagagaaggaagagcaacttaaagaccagaacaagaactatgaactc
ttgcaacgcgcgatcgttaacgttcagctgcagcaatacatggctttgcagtacacgcag
atgctgcaaggaataataccaccacagcagctaccaggagatccaaacccccaagcacaa
tatcccccacacctaaaccaaatgccacctggacatcctcactgtcctctacctggccag
ccggccttcaatcccgctggactgccattcccgggagggatgatgcctaatttcgcagcc
cagtttccaccgcagcagtttttcccattcccaaccaccctgcagcagcaagcacaggat
cagaacgtgggcagcaatccaggggccccccagccctgcccgcctccaaacatcatccag
atccaccacgccagcaacattcagatcggaaaccaggcacagatgagcgtcagcgcggcc
agcgaggaagacgaagacgaggaagacgaagaagcagtccaggaaagcacaggctag
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