Acipenser ruthenus (sterlet): 117401380
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Entry
117401380 CDS
T07327
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117401380
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117401380
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Ion_trans
IRK
Motif
Other DBs
NCBI-GeneID:
117401380
NCBI-ProteinID:
XP_033857903
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Position
39:1530969..1577557
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AA seq
1043 aa
AA seq
DB search
MRLVLVKPANETGRLDSTEAFHDERVLEQYNAGEQQHQQDGAVEGMQHRHPGAVFQHHPL
SQQPCSINSSASHLQKPPSQEGSGASVQHFIPLSNSPPPPLFGQGSAAFLQQNHQESPSP
NLFTQPGTIPPYYRLPPPPPPATTRNHITGQRAQIQKQACCFSVQPLPLQQNRGAATTAA
AAGVTSLQKQHFYQSHYYSNCGYSSQASPNQHQNHRPQLSTPATTTPPFLQHQNSNRGDH
LQNASNYQQQNPSSSFCRRGEGGLGEQNRLQQQPQHHNQSNLHQHPSSCLAAPQEQNLEQ
HSNDSGPLKVKQQSCLFQQQPRDLLPQPLLQQQQQQRLGSSQPSNNYCTNGSGRENRNQL
LQLQGQEQTHLFYQLQQQQQQPPQHCDNYCKKPGEKNQLEWHCCQYPQQDKQPNSHHQEP
SRPLFGNLSGCSSSSSGGGSDNDRSLSYSSNTCLWRQQHQEGNQIRTEQQQVNAEPKKLS
HAGSKPSVCDSSNPFPEIAMNSCKYNGGVVRPLGSLGSSRRNLAELDSETQPLQTLHSSG
LEVVVSKGNGEDPGKVSSDSLSRDGGGAPQKKNKDIGQKLGHRRALFEKRKRLSDYALIF
GMFGIVVMVTETELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHTREIQLFMVDNG
ADDWRIAMTYERIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIP
MFMRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISS
WIIAAWTVRVCERDTMYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLT
GIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKYTK
LVKKIDHARVRKHQRKFLQAIHQAQKLRSVKMEQRKLNDQANSLVDLAKTQNVMYDLVSE
LQERSEDLDKRIGTMEDKLDSITGSLQALPGLLSQAITQQQRDFLDGFAQRFRPASLGSE
RSWTPTRHRRSPSTAPHTSSDSG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtattggtgaaaccagccaatgagacgggccggctcgattctacagaggct
tttcacgatgaaagggttctggagcaatacaacgcaggcgagcagcagcaccagcaggac
ggagctgtagaggggatgcagcatcggcacccgggagctgtctttcagcaccaccctctc
agccagcagccgtgcagcatcaacagcagcgctagtcatctccagaaaccgccgagccaa
gaaggctcaggcgcttcggtgcagcacttcatccctctcagcaactctcctcctccgccg
ctgttcgggcagggttccgccgccttcttgcaacaaaaccatcaagaatctcccagcccg
aaccttttcacccagccaggtaccatccctccttattacaggctgccaccgccaccacca
ccagcaacaacaagaaaccacataaccgggcagcgagcgcaaattcaaaaacaagcctgc
tgcttttctgtccaaccccttcctctgcaacaaaatcgaggggccgctaccaccgctgcc
gcagccggtgtcacttcactgcagaagcagcacttctatcagagccactattacagcaac
tgcggttattccagtcaagcgagcccgaaccaacaccagaaccaccgcccgcagctgtct
acaccagcaacaacaacaccgccgtttctacagcatcagaattcgaatcggggggaccat
ttgcagaacgctagcaattaccagcagcagaacccgagcagcagcttctgccgcagagga
gaaggagggttaggggagcagaaccgtttgcagcagcaacctcagcatcataatcagtcc
aacctacatcagcacccctcctcttgcctagcagcaccacaagagcagaatctagagcag
catagcaatgatagcggtccgttgaaggtaaagcagcagtcctgtttatttcagcagcag
ccccgagatttgctaccgcaacctttactgcagcagcaacaacaacagcggctagggagc
agccagcctagtaacaactactgcaccaacggatcagggcgggagaatagaaatcaacta
ctacaactgcaagggcaagaacagacacacttgttctaccaactgcagcagcagcaacag
cagcctccgcagcactgtgacaactactgcaagaagccaggggagaaaaatcaattggag
tggcactgctgccagtacccccaacaagacaaacagccgaacagccaccatcaagaaccg
agccgcccgctctttggaaacttgtccggctgcagcagcagcagcagcggcggcggcagc
gacaacgatcgcagcctgtcatactcctcaaacacctgcctgtggcggcagcagcaccaa
gaaggaaaccagatccgaactgagcaacagcaggtaaatgctgagcccaagaagctaagc
catgctggatccaagccctccgtctgcgacagtagtaacccattccccgagatagccatg
aacagctgcaagtacaatgggggcgtggtgagacccctgggcagcctgggctcgtcacgg
cgcaacctcgccgagctggactcggagacgcagcccctgcagacgctacacagctccggc
ctggaggtggtggtctccaagggcaatggcgaggaccccggcaaggtgtccagtgacagc
ctgtcccgcgacggagggggcgcgccgcagaagaagaacaaggacatcgggcaaaagctg
ggccaccgcagggcgctgttcgagaagcgcaaacggctcagcgactacgctttgatcttc
gggatgtttgggatcgtcgtcatggtgaccgagacggaactttcctggggggtttacacc
aaggaatcctcatattcatttgcactgaaatgccttatcagcctttccactgttatattg
cttggtctcattataatgtaccacactcgagagatccagctcttcatggtggacaatggg
gcggacgactggagaatagccatgacgtacgagcggatatttttcatcgttctggagctt
ctggtgtgcgccatccacccaatcccggggcagtacgttttcacgtggacggcgcgcctg
gccttcacctacacgccctcggtggcggacgctgacgtggacattattctctccatcccc
atgttcatgcgcctctacctgattgggcgagtcatgctgctgcacagcaagctcttcacg
gacgcctcgtcacggagcatcggcgcgctcaataagatcaacttcaacacgcgcttcgtc
atgaagaccctcatgaccatctgccccgggaccgtgctgctggtgttcagcatctcctcc
tggatcatcgctgcctggacggtgcgcgtctgcgagagggataccatgtatcatgacaaa
caggaagtgactagtaacttcctgggagccatgtggctaatttcaataaccttcctctcg
attggctacggagacatggtgcctcacacttactgtgggaagggtgtgtgtctgctgaca
gggatcatgggggccggctgcacagcgctcgtggttgccgtggttgccaggaagctggag
ttgaccaaggccgagaaacacgtccacaacttcatgatggacacgcagctctgcaagcgg
gtaaaaaacacggctgcaaatgtactcagggaaacgtggctcatctacaaatacacaaaa
ctggtgaagaagattgaccacgccagggtgcgcaaacaccagcgcaagttcctacaagca
atccaccaagctcagaaactgcgcagtgtgaaaatggaacagaggaagctgaacgaccag
gcaaacagtttggtggacttggcgaagacgcagaacgtgatgtacgacctggtgtcggag
ctgcaggagcgcagcgaggacctggacaagcgcatcgggacgatggaggacaagctggac
tccatcacgggcagcctccaggccctgcctggcctcctcagccaagccataacacagcag
cagcgggacttcctagacggctttgcgcagcgcttcaggccggcttcgctgggttccgag
cggtcctggactcccactaggcaccggcgctcgccctccaccgcgccacacacctcctcc
gacagcgggtaa
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