Acipenser ruthenus (sterlet): 117401423
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Entry
117401423 CDS
T07327
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117401423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117401423
Membrane trafficking [BR:
arut04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117401423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
PH_13
SOS1_NGEF_PH
DUF7239
Prok-RING_1
Poty_PP
C1_2
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
117401423
NCBI-ProteinID:
XP_034768185
LinkDB
All DBs
Position
40:5154632..5200063
Genome browser
AA seq
1535 aa
AA seq
DB search
MSPPSIAEDVFFGMTEEKDDSSGDTDSEDHTLDLNSSIEDLLSLNPSLQGTEYFKDLEIH
LTGGTNAMQEMTTSVNSCPCNKPQKNNGRYFQHDNGSNSCPGSLSYQESSKGTREPLQTT
DTQDLCAHADRQGDGSLVNTVKYLGDLDDKVDKDTEPETFPILLRTLSSSRRHSWEYPVS
PVDPGKRFSLDASAMDSDGEQGDADPSQLTESFTLPEGGPAGPINTAEEKDPPQESPNPK
AKDGSDLEDASKRLRSKSVVHLSEKVGTVRLSRSLEDWFPAPEGTEQKAREESETTPEEQ
NRMLMVTQVLQELKHYHGAKQRQKTEGKASSSQNLTWYEFLSNANEEEDKTDKVEKGTKV
KRRLSSLRSRVAGSFQKDKGKNREKEQQKEKEKEREKEKEKEPKEKMRMRNGHQLVPGTF
SSCTTCTLCSKTLQRKPGLQCMNCGVNVHKSCKNLLGECSSSSSSSKLKRDSQRNPTPGS
PQSTGHNHSQAGSFLKEQSRSAVSGPDGSCASSRSPGMTITQRGSNTQLTTSTAANHANT
YGSITGEMEEIDGFIKLKQQSEDAVSLAPSTAESIVVEDAQYASLRGELELDAQDIEAES
WSLAVDPAYLKKHPKEAVKRQDVIHELIQTEMHHVRTLKIMLNVYVRGIRENLQMDDSKV
EKIFPCVENLLEIHRRFLSRLKERRKESLEEGSDHNYVIHRIGDILVSEFSGEIGERMKE
SYGDFCSHHSEAVNYYKELLQNNKKFQNLIRKINNLSIVRRLGVPECILLVTQRITKYPV
LVERIIQNTEVGSEDHEELTRALGLIKDAITQVDAKVNDYENKTRLKDIASKMEPKSSGK
FKDGRLFGKEEILKGRRRLLHEGMVYWKAASGRLKDILAVLLTDVLLLIQEKDQKYTFAT
VDSKPSVISLQKLIVREVAHEEKAMFLICASSAEPEMYEIHTTSKEERNTWMNLIRQAAE
SCPDVEEGVSSDPEEERRLAEARALKLKEFQERLISKDRQIVQSLSEKLQIFTEISEVMS
GFEDSTQGARSRLLVRGDPSDTLLGEQLLKDAIAEVENLQNLLISHGRDVSWQPEDGLGS
SGLPRRAETFGGYESSPTVMNKNGSMKKKSYTVSYTGEHKLRERRGQLTSCDPELQDLWG
DEGAQQMAEVPEKSWHNVWSPPFHESEFIQSVQTLSQLLYSLQAIIAQQDSYMELQRASL
PDRDRQNRLRGNGLLEQEKQRNFEKQREEMANFQKLQSQLRLEQQRWERDREKQRRLAEV
EEDRLKGREEECRQLQDRLRMEHEELEKQREKYQQDLERLRESTRTVEKEMERVELQKYN
LRKLKTMSFAPDTSQGHNRSHSISFNGDGFLNSEGALQLPVKPQGRSSQSVAGADYMQRP
EVLLRRENSTAESRPLLPIKSEVPIHLISTTNQLHKQTGVQQRIPTKLALLSSKGKEKGS
RGKGSHRTESAAADLRQLLPLRLSGKEDGTLKTKRSCSPNQNFQQEPVSPPDNHSDATHL
SPHGVQKQNSQGSLQTPSPQPSIAEEMTKEDVIFF
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccccgtccatcgcagaggatgtcttcttcggcatgactgaggaaaaggatgac
tcttcaggtgatacagattctgaggaccacactctggatctcaacagcagcatcgaggac
cttctctcgctaaacccctcccttcaggggacagaatatttcaaagacctggagatccat
cttactggaggaaccaacgccatgcaggaaatgaccacgtctgtgaacagctgcccgtgc
aacaagccacagaagaacaatggacgctatttccagcacgataacggcagtaactcttgc
ccaggctccttgtcttatcaagagagttccaagggcaccagggaacccctgcaaaccacg
gacacacaggatttatgtgcccacgctgacagacaaggtgatggctctctcgtcaataca
gttaaatacctgggggacttggacgacaaggtggataaagacactgagcctgagacattc
ccaatacttctgaggactttgtctagctcacggagacacagttgggaataccctgtatca
ccagtggacccagggaaaaggtttagcctggatgcgtctgccatggacagcgatggggag
caaggggacgcagacccatctcagctgacagagtccttcaccttaccagagggaggccca
gcgggaccgatcaacactgcagaagaaaaagatcccccgcaggagtctcccaaccccaaa
gcaaaggatggatcggacctggaagatgctagcaaaaggctcaggtcaaagtcggtggtg
catttgtcagaaaaagttggtacggtccgtctctctcgaagtctcgaggattggtttcca
gctcctgaaggaacagaacaaaaagccagagaggaaagtgaaacaactcccgaagagcag
aatcgcatgctgatggtaacacaggtgttgcaagaactaaagcattaccacggagcaaag
cagaggcagaagacagaaggaaaagcatcatcttcacaaaacctgacctggtatgaattt
ctctctaatgcaaacgaagaagaggacaagacagacaaagtggagaaaggaaccaaagtg
aaacgaaggctgagctctctgaggagcagagtagcaggatcctttcagaaagacaagggt
aagaatcgagaaaaagagcagcaaaaggaaaaagaaaaggaaagggagaaagagaaggaa
aaagagccaaaagaaaagatgcgaatgagaaacgggcaccagctggtgccgggcacgttc
tccagctgtaccacgtgcacgctgtgcagcaaaacactgcaaaggaagcctgggcttcag
tgcatgaactgcggcgtgaatgtccacaagagttgcaagaacctgctgggtgaatgcagc
agcagcagcagcagcagtaaactcaagagagattcccagagaaacccgactcccgggtct
ccgcagagcacaggacacaatcacagtcaagccggctcgtttctgaaggaacagtcacgg
agtgccgtctcgggtcctgatggctcctgtgcttcctcgcgcagtccaggcatgaccatc
acacaacggggaagcaacactcagctcacaaccagcaccgctgctaaccacgccaataca
tacggatcaatcacaggagagatggaagaaatagatgggtttataaaactaaagcaacag
tcagaagatgctgtctctctggctccgtccacagcggagtccattgtagttgaagatgca
cagtatgcatctctcaggggggagctggaattagatgcccaggatattgaagcagaatcg
tggagcctggctgtcgacccagcgtacttaaagaaacacccgaaggaggcggtgaagaga
caagatgttatacatgagttgatccagactgagatgcaccacgtccggacgctgaagatc
atgctgaacgtctacgtgcgaggaatcagggagaacctgcaaatggacgacagcaaggtg
gagaaaatcttcccttgcgtcgagaacctcctggaaatccacagacggttcttatcccgg
ctgaaggaaaggcggaaagaatccttggaggaagggagcgaccacaactacgtcattcac
aggataggagatatcctggtgtcagagttttctggagagattggagagagaatgaaggaa
agctatggagatttttgcagtcatcacagtgaagccgtcaactattataaagaactgcta
cagaataacaaaaagttccagaacttgattaggaaaattaataacctttctatagtaagg
agactaggagtgccggagtgtatcctgttggtcactcagcgcatcacaaagtatcctgta
ttggtggaaagaattatacagaacacggaagttggttcagaagaccacgaggagctgacc
cgagctttgggccttattaaagacgccatcacacaagtagatgccaaagtcaacgactac
gagaataaaactaggcttaaagacattgccagcaaaatggagcccaaatcttctgggaaa
ttcaaagacgggcgcttattcggcaaggaggagatactgaaggggagacgacggctcttg
catgaaggaatggtttattggaaagctgcttcggggcgtcttaaagatattctggctgtg
cttcttactgatgtacttttgttaatacaagaaaaggaccaaaaatatacatttgctact
gtggatagcaaaccgtcggtgatctccctgcagaagctaattgtgcgagaagtggcccac
gaggagaaagcgatgttcttgatatgtgcctcctcagcagagccagagatgtatgaaatt
cacaccacctccaaagaggagcgcaacacctggatgaacttgatccgccaggcggcagaa
agttgtcctgatgtagaggaaggagtttcaagtgacccggaggaagaacgcagactggct
gaggcacgagcccttaaattaaaagaattccaagagcgcctgatttctaaagacagacag
attgtgcagagcctcagtgagaagctgcagatcttcactgagatctcagaggtgatgagc
gggtttgaagactcgactcagggggcccgctcccggctgctggtgcgtggagacccctct
gacacgctgctgggggagcagcttctcaaggatgccatcgctgaagttgaaaatcttcag
aacctgctgatttcccatgggagggatgtgagctggcaacctgaagacgggctggggtcc
tcagggttaccacggcgggcagagacgtttggaggatatgaatccagtcccaccgttatg
aataaaaatggcagcatgaagaaaaagtcttacactgtgtcttacactggggaacacaag
ctgagagaaaggagaggccagctgacaagctgtgaccccgagctgcaggacctgtggggc
gatgaaggagcacaacaaatggctgaagtaccagaaaaaagttggcataatgtgtggagc
cctccctttcacgaatcggagtttattcagagtgtgcagaccttgtcacagctgctttac
agtcttcaggccatcattgcgcaacaagacagctacatggagctccagcgtgcatcgctg
ccggaccgggacaggcagaaccggctgcggggcaacgggctgctggagcaggagaagcag
cgtaacttcgagaagcagcgggaagagatggccaacttccagaagctgcagagccagctg
cgtctggagcagcagcgctgggagcgcgaccgggagaagcagcggcggctggccgaggtg
gaggaggataggctgaaggggcgcgaggaggagtgccggcagctccaggatcggctccgg
atggagcacgaggagctggagaagcagcgggagaagtaccagcaggacctggagcgtctg
cgggagtccacgcggaccgtggagaaggagatggagcgggtggagctgcagaagtataat
ctgaggaagctcaagaccatgtcctttgcaccagacacgtcgcagggccataaccggagt
cattccatcagttttaatggagatgggttcctgaacagcgaaggcgcccttcagctgcct
gtgaagccacagggccgttcaagtcagtctgtggcaggggcagattacatgcagcggccc
gaagtcttactgaggcgagagaacagcacggcagagtcccggcccttgctccccatcaag
tccgaggtgcccatccacctgatcagcaccaccaaccagctccacaagcagactggcgtg
caacaacgcatccccaccaagctggccctcctctcctccaagggtaaagagaagggcagc
agaggcaagggatcccacaggacggaaagcgcagctgcagacctgaggcagttgctaccc
ctcagactgtctggaaaggaggatggtactttaaaaaccaagaggtcttgtagcccaaac
caaaacttccaacaagaaccagtaagccctccagacaaccattccgatgccactcatctg
tccccacacggtgtgcagaaacagaacagccagggatcgctgcagaccccctccccacag
cccagcatcgccgaggagatgaccaaggaggacgtcatctttttctaa
DBGET
integrated database retrieval system
