Acipenser ruthenus (sterlet): 117401456
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Entry
117401456 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
arut03029
]
117401456
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117401456
Mitochondrial biogenesis [BR:
arut03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
117401456
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
Motif
Other DBs
NCBI-GeneID:
117401456
NCBI-ProteinID:
XP_034767822
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Position
39:complement(3966057..4009708)
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AA seq
1279 aa
AA seq
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MSLLRLCSLSKGLPGRLLQEQHRLTLLFNADPCHGCLKLRRHVHDKSPAERPWVLFRRSY
SAGIPKKEDGKKRTWEQTQLLDVLDARIQQLQMDGVLDVKRSEVQFVRASQMEATPVKVV
KTLAKEREPLGARKGGDQDRLVSKTQPSRWMEKLKQEKWNKSKRHLKLDQNAKHKSLQGS
HVADSKGKASGAKSDNPNPKTDSKKAAAGSRLDSASSKEESLLAEVEDLDHRLNQWEQPE
GTQRLLEDREGNKYGDAQLSIHSFLEACIFNEDVERAQRCLMDYHRNLSRRKQLSINTYN
IMMHVWAKKGSLGHIGRLFVLVEEAGLKPNLDSYTAALECMGRSPHCSNRVISRCLQQLE
EDGFSIEDLFKQCVFREDEREMVLKAVQTVHPDFLPHVDAEMKICSSPLVHDFYTERESA
VYPKLDFPLAELGERFSRQLAMEQAGSVTIESVEASKPLTEHMIQMRELLAQLRSHWHQS
LLQAFRESKMHLGSSGQKSWRMNLYPYLCLLEDKEYVDIMLQAVTSLPPTGESLLTMAKE
LGNKIYNKYSIRKKTKSSMVDKISTIYQRYAELLARDTQLNEFLPREHWVRLEAELNSGP
SLLSDDTHWPHILVVQLGTHLVELLVREVKVNSNVLSPAQETKLIPVLYHMYTFRSNHQV
GFIKPHPILTQILSEAVETTLTFDSYVMPMLCPPVPWTSPKFGAYILTPTKLMRCVEGAI
QHQLLLEKCQDQDLHAVLDSLNQLGNCAWRINQPILDIIISIFNDKGSDKLDIPPPVSEA
PRMPSMAPHGGGQGSQADKASFKRELAKCKKKGAEMHSLRMDALYKLSIANHMRDQLFWF
PHNMDFRGRTYPCPPYFNHLGSDVTRAVLLFAEGKPLGPHGLDWIKIHLVNLTGLKKRDS
LRERLQYANRIMDDILDSADKPLTGRKWWMNADEPWQALACCIEIANASRSPDHTEYISX
FPVHQDGSCNGLQHYAALGRDVIGATSVNLMPCEVPQDVYSGVAQQVEEFRARDAEKGLK
VAQVLEGFINRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIEEFPKEHVWDASHYLVQQV
FTSLKEMFTGTREIQDWLTESARLIAKSGSSVEWVTPLGLPIVQPYHRTKNTILKSNIQF
LSLQISHDASERPDTVKQKNAFPPNFIHSLDSTHMMLTALYCYSAGLTFVSVHDCFWTHA
VTVDVMNKVCREQFVALHSQPILQDLSNFLLDKYGACLPGDRRNKKFLEYRRMLELLSKV
PQTGDFDLQRVKESTYFFS
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgctccggctctgctcgctttccaaggggctccccggtcgcttactgcaggaa
caacacaggctcactctgctgttcaatgcggacccgtgtcacggttgcttaaaactcagg
agacacgtccacgacaaaagtccagcagagagaccctgggttttgtttcggaggagttat
tcagcggggatcccgaaaaaggaggatgggaaaaagaggacgtgggagcaaacccagctg
ttggatgttctggatgccaggatccagcagctgcagatggacggggtgctggatgtgaag
cgctcggaggtgcagtttgtgagggcgtcccagatggaggccaccccggtcaaggtggtg
aagacgctggccaaggagagggaacccctgggggccaggaaggggggggaccaggaccgg
ctggtttctaagacacagcccagccgctggatggagaaactcaagcaggagaagtggaac
aagagcaaaaggcacctgaaactcgaccagaatgccaaacacaagtctctgcagggcagc
catgtggcagattctaaaggaaaggcatctggagccaagagtgacaatcccaatccgaag
acagactccaagaaggcagcggctggatcccgtttagacagcgctagttccaaggaggag
tccctgctggccgaagtggaagatctggaccaccgcttgaaccagtgggagcagccggag
ggaacgcaaaggctgctggaggaccgggaggggaataagtacggggacgcccagctgagc
atccactccttcctggaggcctgcatcttcaacgaggatgtggagagagcccagcgctgc
ctcatggactaccaccgtaacctgagccgtcgcaagcagctcagcatcaacacctacaac
atcatgatgcacgtctgggccaagaagggctctctggggcacatcggccggctcttcgtt
ctcgtggaggaggctggcttgaagccgaacctggattcctacaccgcggctctggaatgc
atgggccgcagcccccactgctccaatcgggtcatcagcaggtgtttgcagcagctggaa
gaggacggcttctccatcgaggatctgtttaagcagtgcgtcttccgggaggacgagcgg
gagatggtcctgaaggcagtgcagaccgttcatccagacttcctgccacacgtggacgca
gagatgaagatctgctcttcccccttagtccatgacttctatacagagagggagtcggca
gtgtaccctaagctggatttccccctggcagagctgggtgagcgcttcagcaggcagctg
gcgatggagcaggcgggcagcgtcaccatcgagtctgtggaagcctccaaacccctgacc
gagcacatgatccaaatgagggagctgctggctcagttgcgctcacactggcaccagtct
ctcctgcaagccttccgcgagagcaagatgcacctggggagcagcggacagaagagctgg
aggatgaacctctacccctacctctgcctgctggaggacaaggagtacgtggacatcatg
ctgcaggctgttaccagcctgccccccactggggagtcactgctgaccatggccaaggaa
ctggggaacaaaatctacaacaaatactccatccgtaagaagaccaagagcagcatggtg
gacaagatcagcaccatataccagagatacgctgagctgctggccagagacacacagttg
aatgagttcctgccgcgggagcactgggtgcgcctggaggcagagctgaactctggcccc
tccctcctgagtgatgacacgcactggccccacatcctggtggtgcagctggggactcac
ctggtggagctgctggtgcgggaggtgaaggtgaacagcaacgtgctgagccccgcccag
gagaccaagctcatcccagtgctgtaccacatgtacaccttccgcagcaaccaccaggtg
ggtttcatcaagcctcaccccatcctcacccaaatcctctcggaggccgtggagaccacg
ctgaccttcgactcttacgtgatgcccatgctgtgcccgcccgtgccctggacctccccc
aaattcggcgcctacatcctgacccccaccaagctgatgcgctgcgtggagggagccatc
cagcaccagctgctgctggagaaatgccaggaccaggacctccacgcggtgctggactcc
ctcaaccagctgggcaactgcgcctggaggatcaaccagcccatcctggacatcatcata
tccatcttcaacgacaagggcagcgacaagctggacatcccccccccggtctccgaggcc
ccccggatgcccagcatggctccgcacggggggggacagggctcgcaagcagacaaggcc
tccttcaagcgcgagctggccaagtgcaagaagaagggggcggagatgcacagcctgcgg
atggacgcgctctacaagctgtccatcgccaaccacatgcgcgaccagctcttctggttt
ccccacaacatggacttccgcggccgcacctacccctgcccgccctacttcaaccacctg
ggaagcgacgtcacgcgggccgtgctcctgttcgcggaggggaagcctctggggccccac
ggcctggactggatcaagatccacctggttaacctgaccgggctgaagaagagggactct
ctgcgggagaggctgcagtacgccaaccgcatcatggatgatattctggattcggcagac
aagcccctcactggcaggaagtggtggatgaatgcagatgagccttggcaggccctggca
tgctgcattgagatagcgaacgcttcccgatccccagaccataccgaatacatctccnta
tttccagtgcaccaggatggctcatgtaacgggcttcagcattacgcagctctgggtcgt
gatgtcatcggcgccacctcggtcaacctgatgccctgcgaggtgccccaggacgtgtac
agtggagtggcgcagcaggtggaggagttccgtgcgcgcgatgcagagaaaggcctgaag
gtggcgcaggtgctggagggtttcatcaacaggaaggtggtgaagcagaccgtgatgacg
gtggtgtacggggtgacgcggtacggaggccggctgcagatcgagaagagactgaaggag
atagaagagttccccaaggagcacgtctgggacgcctcccattacctggtgcagcaggtc
tttaccagcctgaaggagatgttcacaggaaccagagaaatccaggactggctcacagag
agcgccagactcattgccaaatctggcagttctgtggagtgggtgacccctcttggcctg
cctattgtacagccttatcaccgcaccaagaacactattctgaagagcaacatccagttt
ctgagtttgcagatcagccacgatgccagcgagcgtcctgacacggtgaagcagaagaac
gcctttcctccgaatttcatccactcccttgactccacacacatgatgctgacagccttg
tactgctacagcgctggattaacattcgtctctgttcacgactgcttttggacccacgct
gtcacggtggatgtgatgaataaggtctgcagagagcagtttgtggccctgcacagccag
cccatccttcaggacctctccaacttcctgctggataaatacggcgcctgcctaccggga
gatcgtaggaacaagaagtttttggagtacaggaggatgttggaactgctgtccaaagtt
ccccagacaggtgattttgatctgcagagggtgaaagaatctacatatttcttcagctga
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