Acipenser ruthenus (sterlet): 117401531
Help
Entry
117401531 CDS
T07327
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117401531
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
117401531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_alt
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT122_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
117401531
NCBI-ProteinID:
XP_033858201
LinkDB
All DBs
Position
39:complement(5712654..5750180)
Genome browser
AA seq
431 aa
AA seq
DB search
MSAPMEVVVCSDSAGQLWNCAVFELHSGTNLLSYRGGNTSARSLAILNGEHLLGAQLGKN
YINVWEIQRKDQLQQKIVCPGIVTCLTGSPNGLYLLAGIAESIYLWEVSTGSLLAVLNRH
YQDLTCLRFTDDSSHFISGGKDNLALVWSICSVLQADPSQTPEPRHVWARHSLPITDIHC
GLMGPQARVATASLDQTVKLWEISSGEILLSVLFDVGILSVTFDPCEYSMFCGGSDGNIF
QVALCGTNLQRDKSFQNDREGNQVFKGHRNLVTCLSVSMDGTLLVSGSHDETVRLWDIQS
KQCVRTVNHKGSVTNAFIMPAPANMFQPDSRPTVGLPRFTRHLNTSEPGEGGETGGVSLR
LGLHMQGTEDSYLEKAGRLHALMCAATDKSVFGNGENTKVRVAELEDEVKKLKKINKDLY
EFSTQILTKQH
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcccatggaggtagtggtctgctcggactcggctgggcagctctggaactgc
gcggttttcgagcttcattccgggaccaacctgctctcataccggggagggaacacctcg
gctcggtccctggctatcctgaacggggaacaccttctcggagcccagctcggcaagaac
tacatcaacgtgtgggagatccagagaaaggatcagctgcagcagaagattgtgtgtcct
gggatcgtgacctgcctgactggctcccccaatggcctgtacctgctggctgggattgca
gagagcatctacctgtgggaggtctcgactggaagcctgctggcggtgctcaacagacac
taccaggatctgacctgcctgcgcttcactgatgacagcagccacttcatctcaggaggc
aaagacaacctggccctggtgtggagcatctgcagtgtgctgcaggcagacccctctcag
actccagagccccggcatgtctgggcccggcactccctccccatcacagacatccactgt
ggcctaatgggaccccaggctcgtgtagccactgcctccctggaccagactgtcaagctt
tgggaaatctcctcaggggagatcctgctgtctgtcctcttcgatgtggggatcttgtcc
gtcaccttcgacccctgcgagtactctatgttctgtggcggcagtgacggcaacatcttc
caggtcgctctgtgtggaacgaatctccagcgagacaagagctttcagaacgaccgggag
gggaatcaggtgttcaagggacacaggaacctggtgacatgtctctctgtgtccatggac
ggcacgctgttagtctcgggctcccatgacgagactgtaaggctgtgggacattcagagt
aagcagtgcgtgaggaccgtcaaccacaaaggctcggtgaccaatgcctttatcatgccc
gctcctgcaaacatgttccagccggacagccgacccactgtgggactgcctcgcttcacc
cgccacctgaacacctcggagccaggggaggggggcgagacagggggggtcagcctgcgc
ctggggctccatatgcagggcactgaagactcatacttggagaaggctggcaggttgcat
gcgttgatgtgtgcagccacagacaagagtgtgttcggaaacggggagaataccaaggtg
cgagtggcggagctggaggacgaggtgaagaagctaaagaagatcaacaaggacctttac
gagttctcaacacaaatcctgaccaagcaacactga
DBGET
integrated database retrieval system