Acipenser ruthenus (sterlet): 117401662
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Entry
117401662 CDS
T07327
Name
(RefSeq) tenascin-N-like isoform X1
KO
K06252
tenascin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
arut04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117401662
04518 Integrin signaling
117401662
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117401662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117401662
Glycosaminoglycan binding proteins [BR:
arut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117401662
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Fn3_Dep-1_3rd
DUF4998
EGF_TEN
EGF_Teneurin
EGF_2
DUF4992
DUF7949
EGF_Tenascin
EGF
Motif
Other DBs
NCBI-GeneID:
117401662
NCBI-ProteinID:
XP_033858340
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All DBs
Position
10
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AA seq
1470 aa
AA seq
DB search
MTQSIRPLLLLGVLCVCSVLITADKPAPDQTGDHEVTFRHIYKIDLPTSSDCKVELDSLP
AKDEGTEPVATPVGLDADNNMVFKHNIRLHTPKCDCGASEAFKSVLFRLNRLEGEVTYLK
DQCSQGCCGGGAGLASLCSGHGTFKRDTCGCDCDEGWEGEDCSRRSCPNECNDNGRCVDG
KCICYEGYTGVDCSEQLCLNDCSDKGRCVDGKCQCFSGFTDEDCSQRTCLNDCSSNGECD
DGVCICEEGFFGDDCSQVLGPKDFLLVKASEESLLVNWDYVPGAEYYLLTYYPEGAEGNI
KQIKVPKTKNSHLITGLTSGVNYIINLYTFIKDISSEPSNLEASTVVSSIDSVKVVSQME
HSIHVEWKNPPTEVDFFKLTIVNPEGQENEVRVQMAKGAKTSYIIRDLQPGSLYLIKVQS
VKEDIEGKPSSVNGVTDIDSPTNLVTKSVTEDTATLTWNRVQAPIDEYRIRYTSADGQSQ
EISVGADRNSHKLTGLTPGVEYTVYIWAMKGNLNSKKTSTTAITEIDAPTNLVTKNVTAD
TATLTWNRVQSPIDGYRISYTSADGQSQEISVGADRNSHKLTGLRPGVEYTVYIWAMKGN
SNSKKTSTTAVTEIDAPSNLVTKSVTEDTATLTWNRVQAPIDGYRISYTSADGQSQEIPV
GADRNSHKLTGLRPGVEYTVYIWAMKGNLNSKKTSTTAVTESDTPSNLVTKSVTEDTATL
TWNRVQAPIDGYRISYTSADGQSQVIPVGADRNSHKLTGLRPGVEYTVYIWAMKGNLNSK
KASTKAVTEIDSPTNLVTKNVTEDTATLTWNMVQAPIDGYRISYTSADGQSQEISVGADR
NSHKLTGLRPGVEYTVYIWAMKGNSNSKKTSTKAVTEIDTPSNLVTKSVTEDTATLTWNR
VQAPIDGYRISYTSADGQSQEIPVGADRNSHKLTGLRPGVEYTVYIWAMKGNLNSKKAST
KAVTEIDAPTNLVTKSVTEDTATLTWNRVQAPINEYRISYTSADGQSQEISVGADRNSHK
LTGLRPGVEYTVYIWAIKGNLGSKKASTKAVTEIDAPTNLVTKNVTEDTAILTWNTVQAP
IDGYRISYTSADGQSQEISVGADRNSHKLTGLRPGVEYTVYIWAMKGNRSSKKTSTKAVT
EIDAPTNLRVTDAKKASGVVTWTPPQAVISGYILTYKRADGKGQEAEETLSSTDGSYLLG
GMEQGVHYIVSLVAFRGAMRSKTVETTFTTVGELFPFPMDCTQAMKNGNTSNGIYTIYLN
SDRSKPMKVYCDMTTDGGGWIVIQRRNSGKIDFLKRWKNYTQGFGDMNEEFWLGLDKMYD
LTNSQQYELRVDLRAGSESVYAVYDNFKLAPARQKYQLTIGNYRGTAGDAMTYHQGRAFT
TVDRDNDIALSNCAFTHRGAWWYKNCHLANLNGQYGQTTHSVGVNWKPWKGHEFSIPFAE
MKIRPRIYSENPVLGRKKRSLSGRGKRRTE
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgactcaatcaattagacctctcctcctgctgggggtgctgtgtgtctgcagcgttctc
atcactgctgacaaaccagccccagaccagacaggagatcatgaagtcaccttcagacac
atctataagattgacctgcccacgtcctctgactgtaaggtggagttggactctctccca
gccaaagacgagggtaccgaacctgtggccactcctgtgggcctggatgcagacaacaac
atggtcttcaaacacaacatccggctgcatacacccaagtgtgactgtggtgcctcagag
gccttcaagtctgtgctgttcaggctgaaccgcttggagggggaggtgacctacctgaag
gaccagtgttcccaaggctgctgtggcggtggagcagggttggctagtctgtgtagtggg
cacgggaccttcaagcgggatacatgcggctgtgactgcgatgagggctgggagggtgag
gactgttccaggcgtagctgtccaaacgagtgcaatgacaatgggcggtgtgtggatggc
aagtgcatctgctatgagggctacactggtgtggactgcagcgagcagctctgcctcaat
gattgtagcgacaagggccgctgtgtggacggcaagtgccagtgcttctccggcttcaca
gacgaggactgcagccagcgcacctgcctcaacgactgcagcagcaacggggagtgtgat
gacggggtctgcatctgtgaggaaggattttttggggacgactgctcccaagtgctcggc
cccaaagatttccttttagtgaaagcttctgaagaatcccttttggtgaactgggactat
gtacctggtgcagagtactatctcctcacctattacccagagggggcagaggggaatata
aagcagatcaaagtgccaaagaccaagaactcccacctcatcaccggcctaacttcgggt
gtcaattacatcatcaacttatacacattcataaaggatatctccagtgagccaagcaat
ttggaagccagcacagtggtatcttctattgacagtgtcaaggtggtctctcagatggag
cactccatccatgttgagtggaagaaccctcccactgaagttgattttttcaaattaact
attgtcaacccagaaggtcaggaaaatgaggtcagggttcaaatggcaaaaggagccaaa
accagctacatcatcagagatcttcaacctggctctttgtacctgatcaaagtgcagtca
gttaaggaagatatagaaggaaagccatcttcagttaacggtgtaacagacattgacagc
cccactaacctggtgaccaagagtgtgacagaggacactgccaccctcacctggaacagg
gtgcaggctcccatcgacgagtacaggatcagatacacctcagctgatgggcaaagccag
gagatctctgtgggggcagacaggaactcccacaagctgacaggcctgacacccggagtg
gagtatactgtctacatctgggctatgaagggaaatctcaacagcaagaagacctccact
acagctatcacagagattgatgcccccactaacctggtgaccaagaatgtgacagcggac
actgccaccctcacctggaacagggtgcagtctcccatcgatgggtacagaatcagctac
acctcagctgatgggcagagccaggagatctctgtgggggcagacaggaactcccacaag
ctgacaggcctgagacccggagtggagtatactgtctacatctgggctatgaagggaaat
agcaacagcaagaagacctccactacagctgtcacagagatcgacgcccccagtaacctg
gtgaccaagagtgtgacagaggacactgccaccctcacctggaatagggtgcaggctccc
attgacgggtacaggatcagctacacctcagctgatgggcagagccaggagatccctgtg
ggggcagacaggaactcccacaagctgacaggcctgagacccggagtggagtatactgtc
tacatctgggctatgaagggaaatctcaacagcaagaagacctccactacagctgtcaca
gagagcgacacccccagtaacctggtgaccaagagtgtgacagaggacactgccaccctc
acctggaatagggtgcaggctcccattgacgggtacaggatcagctacacctcagctgat
gggcagagccaggtgatccctgtgggggcagacaggaactcccacaagctgacaggcctg
agacctggagtggagtatactgtctacatctgggctatgaagggaaatctcaacagcaag
aaggcctccactaaagctgtcacagagattgacagccccactaacctggtgaccaagaat
gtgacagaggacactgccaccctcacctggaacatggtgcaggctcccattgacgggtac
aggatcagctacacctcagctgatgggcagagccaggagatctctgtgggggcagacagg
aactcccacaagctgacaggcttgagacccggagtggagtatactgtctacatctgggct
atgaagggaaatagcaacagcaagaagacctccactaaagctgtcacagagatcgacacc
cccagtaacctggtgaccaagagcgtgacagaggacactgccaccctcacctggaatagg
gtgcaggctcccattgacgggtacaggatcagctacacctcagctgatgggcagagccag
gagatccctgtgggggcagacaggaactcccacaagctgacaggcctgagacccggagtg
gagtatactgtctacatctgggctatgaagggaaatctcaacagcaagaaggcctccact
aaagctgtcacagagattgatgcccccactaacctggtgaccaagagtgtgacagaggac
actgccaccctcacctggaacagggtgcaggctcccatcaacgagtacaggatcagctac
acctcagctgatgggcaaagccaggagatctctgtgggggcagacaggaactcccacaag
ctgacaggcctgagacccggagtggagtatactgtctacatctgggctataaagggaaat
ctcggcagcaagaaggcctccactaaagctgtcacagagattgatgcccccactaacctg
gtgaccaagaatgtgacagaggacactgccatcctcacctggaacacggtgcaggctccc
atcgacgggtacagaatcagctacacctcagctgatgggcagagccaggagatctctgtg
ggggcagacaggaattcccacaagctgacaggcctgagacctggagtggagtatactgtc
tacatctgggctatgaagggaaatcgcagcagcaagaagacctccactaaagctgtcaca
gaaattgatgctcctacaaatctgagggtgactgacgccaaaaaggccagtggagtggtg
acgtggacccctccacaggctgttatcagtggctacattcttacttataagagggcagat
ggaaaagggcaggaggcagaggagactcttagctcaactgatggaagttaccttctagga
ggtatggagcagggggttcactacatcgtcagcctagtggccttcagaggagcgatgcgc
agcaagacagtcgagaccacatttaccacagttggagagcttttccccttccccatggac
tgtactcaggcaatgaagaatggaaacacatcaaatggaatctacaccatttacctcaac
agtgacagatcaaagccaatgaaggtgtactgtgacatgaccactgatggtggtggctgg
attgttatccagagacgcaacagcggcaaaattgatttcttgaaacgctggaagaactac
actcaaggctttggggacatgaatgaggaattctggctgggcctggacaagatgtacgac
ctaacaaattcacaacagtatgagctgcgtgtggatctgagggcgggctccgaatcagtg
tacgccgtctatgacaactttaaactggcaccagcaagacagaaataccagctgactatc
ggaaactatagaggcactgcgggtgatgcaatgacctaccaccagggcagagccttcaca
acagtggaccgggataatgacattgccctcagcaactgtgctttcactcatcgtggagcg
tggtggtacaagaattgccacttggccaacctgaatggacaatatggacaaaccacccac
agtgtgggagtgaactggaagccatggaagggacatgagttctccatccccttcgcagaa
atgaaaatcagaccccgcatctacagtgaaaaccctgtgctcgggaggaagaagaggtcc
ctctctggcaggggaaagaggagaaccgaatga
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integrated database retrieval system
