KEGG   Acipenser ruthenus (sterlet): 117401736
Entry
117401736         CDS       T07327                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04137  Mitophagy - animal
arut04140  Autophagy - animal
arut04144  Endocytosis
arut04145  Phagosome
arut04148  Efferocytosis
arut05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:arut00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117401736 (si:dkey-13a21.4)
   04145 Phagosome
    117401736 (si:dkey-13a21.4)
   04140 Autophagy - animal
    117401736 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    117401736 (si:dkey-13a21.4)
   04148 Efferocytosis
    117401736 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117401736 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:arut04131]
    117401736 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117401736 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:arut04031]
    117401736 (si:dkey-13a21.4)
Membrane trafficking [BR:arut04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    117401736 (si:dkey-13a21.4)
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117401736 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   117401736 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   117401736 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   117401736 (si:dkey-13a21.4)
GTP-binding proteins [BR:arut04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    117401736 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase Gtr1_RagA ATP_bind_1 GTP_EFTU Septin AIG1 G-alpha AAA AAA_16 AAA_24 AAA_5 VapE-like_dom AAA_7 RNA_helicase IIGP nSTAND3 FeoB_N
Other DBs
NCBI-GeneID: 117401736
NCBI-ProteinID: XP_033858443
LinkDB
Position
51:complement(4825743..4829626)
AA seq 206 aa
MSPWGKVHLKVILLGNSGVGKSSFMNQFVNHRFTNLYRSTIGADFLTKEMTMDGNTVVLQ
IWDTAGTERFQSLGLALYRGAHCCLLLFDVTSSASFRELDLWRKEFLIQADPAHSQHFPF
VVVGNKSDLPEREVSGKLAQDWCRENNAEYFEASAKEAVNVERAFQSAVRLSLQYHKDNT
PEPAFESFQLSSKNEPEEKPTKQCAC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcaccgtgggggaaggttcacctcaaagttattttacttggcaattctggggtgggg
aaatcgtccttcatgaaccagtttgtgaaccatcgcttcaccaatctgtatcgctccacc
atcggggcggacttcctcacgaaggagatgacgatggacgggaacacagtcgtcctgcag
atctgggacacggccggcacggagcggttccagtccctgggtctggcgctgtaccgaggc
gctcactgctgtctgctgctcttcgatgtcacctcctctgcttcgttccgggagctggat
ctgtggaggaaggagttcctgatccaggccgacccggcccattcccaacacttcccattc
gtggtggtggggaataagagcgacctcccggagcgggaggtctccggtaaactggcccag
gactggtgccgggagaataacgcagagtatttcgaagccagcgccaaggaggcggtgaac
gtcgagcgagcatttcagagcgcggtgcggctctccctgcagtatcacaaggacaacacc
ccagaacctgcttttgagagcttccaactgtcctccaaaaacgagccagaggagaaaccc
accaagcagtgcgcctgctga

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