Acipenser ruthenus (sterlet): 117402071
Help
Entry
117402071 CDS
T07327
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03320
PPAR signaling pathway
arut04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117402071
03320 PPAR signaling pathway
117402071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117402071
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
arut03310
]
117402071
Transcription factors [BR:
arut03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
117402071
Nuclear receptors [BR:
arut03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
117402071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
MbnB_TglH_ChrH
Motif
Other DBs
NCBI-GeneID:
117402071
NCBI-ProteinID:
XP_033858815
LinkDB
All DBs
Position
10:10833346..10857060
Genome browser
AA seq
483 aa
AA seq
DB search
MAGKETAEEPVTRLNMYGTRHPFMMLPMGSENSSVQVNHTSINCPPSQCAMNTMVGHPSV
ISTSSNNSRSFTSPMNTLGSSINGLASPYSVITPSLGSPSVSLPSTPGMNYGALNSPQMS
SMSNVSSTEDIKPPPGLSGIGSLSSYPCTSPGSLSKHICAICGDRSSGKHYGVYSCEGCK
GFFKRTIRKDLTYTCRDSKDCMVDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGREKS
DNEVESTSSYSDEMPVDKILDAELAVEPKTEIYVDASTDNSFNDPVTNICQAADKQLFTL
VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSVSVKDGILLATGLHVHRSSAHS
AGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLYNPDAKGLSNPLEVEGMREKVYAS
LEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPH
QIT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaagaaacagcagaagaacctgtaacaagactaaacatgtatgggactcgc
catcccttcatgatgcttccgatgggctctgaaaattcttctgtgcaggttaaccacaca
tctataaactgtcctccatcacagtgtgcaatgaataccatggttgggcatccatcagtg
atcagtacatcaagcaacaattcaaggtcgttcacatccccaatgaacacactaggatca
tctatcaatggattagcctctccatattcagttataacaccgtccttagggtcgccgtct
gtctcactaccatccacacctggcatgaattatggggctttaaatagtccacagatgagc
tcaatgagcaatgtgagcagtacagaagatatcaagccccctccaggactttctggaatt
ggaagccttagcagctatccgtgtacaagcccgggatccctatccaaacacatatgtgcg
atctgtggagatcggtcttcagggaagcactatggcgtgtacagctgtgaaggatgcaaa
gggttcttcaagaggactatcaggaaagaccttacatacacgtgtcgggacagcaaggat
tgcatggttgacaagcgacagcgcaatcgctgccagtactgccgctatcagaagtgtctg
gcaatgggaatgaagagagaagctgtacaggaggaaaggcaaagaggcagagaaaagagt
gataatgaggtggagtcaacaagcagctacagtgatgaaatgcctgtggataaaatcctg
gatgcagaacttgcagttgaaccaaagacggaaatctatgtggatgccagtacagacaat
tcttttaatgatccagttaccaacatttgccaagcagcagacaaacagctcttcactctg
gtggaatgggctaaaagaatccctcacttctcagagctgcctctggatgatcaagtcatt
ctgctgagggcaggttggaatgaattgcttatcgcctcattttcacaccggtcagtatct
gttaaagatggcatccttcttgccactggtttacatgtacatcgaagcagtgcccacagt
gctggggttggatccatttttgacagagttctcacagaattagtgtctaaaatgaaagac
atgcaaatggataaaacagaactgggatgccttcgagccattgttctttataatccagat
gcgaagggcctatcaaacccactggaagtagaaggaatgagggaaaaggtttatgcatca
ctcgaggcttatacgaaacagaaatacccagagcagcctggcaggtttgccaaacttctg
ctccgactgcctgcactgcgatcaattggattgaaatgtttagagcacctcttcttcttc
aagttgattggagacaccccgatagacacgtttcttatggaaatgcttgaagcaccacac
caaataacatga
DBGET
integrated database retrieval system
