Acipenser ruthenus (sterlet): 117402223
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Entry
117402223 CDS
T07327
Name
(RefSeq) patched domain-containing protein 1-like
KO
K24682
patched domain-containing protein
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arut04990
]
117402223
Domain-containing proteins not elsewhere classified [BR:
arut04990
]
Other domain-containing proteins
Patched domain-containing proteins
117402223
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
117402223
NCBI-ProteinID:
XP_034777063
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All DBs
Position
5:76107652..76129713
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AA seq
910 aa
AA seq
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MCFVGRNGASASWTWRRMLRQVIHRGLKAAFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
VSRFKPETDLEILVSPTHSLAKIERSLANSLFPIEQSKNKLYSDLHTPGRYGRLILLSKS
SENILELPNQVLQVHKSVLDLKVNYKGFNYTFAHLCVMSNRDKTCLLDDIISIFEDLQQA
AASNSTPSSRVQVSYPNTRLKDGRISFIGHQLGGVTFAANSKDQQFKTARAVQITYYLHN
YGNANQDIIAEKWENEFCKLLLKLSAVNEDIYIQSLTSFSLWRDFNKTGMLARSEVLVSL
VLILLAATVSSSMRDCLRGKPFLGLLGVFTICIANVTAAGIFFITDGKYNSTLLGVPFFA
MGHGTKGVFELLAGWRRTRENQPFKERVADTFADVMVCYTMTSSMYLLTFGMGASPFTNI
ESVKIFCQNMCVTILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSSEYLERQPTW
FKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFMG
CLQISDGSNILNLLASDSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNTTVQEHLNTL
GHGFNRISWIDHYFQHLKVINITTPTKSDFITVLQNSFLIKKEFQHFKDDIIFSKTGDEV
DIIASRMYMVARTSENTREEVVELLDRLRPLSLINSIKFIVFNPTFVFMDRYSSSIISPI
LTSGFSVLIALVLTVFLVINPLVINPLGNFWLIITVTSVELGVLGLMTLWNVDMDSISIL
CLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQTASCFLIGLMPLLFV
PSNLTFTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRQKKKKRAKRKEREEIECIEV
RDHPDHVTSV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcgtaggaagaaacggggcatctgcaagctggacctggaggaggatgctgcgg
caagtgattcacagagggctcaaagctgctttttactggctcggcttatttgttagcagg
catccagtgtttttcctcactgttcccgcagtcttaactataatcttcggatccaccgtc
gtgagcagatttaagcccgaaacagacctagagattctggtttccccgacccacagcctg
gcaaaaatagaaaggagtctggcgaacagtcttttccctatcgagcagtccaaaaacaag
ctgtattcagacctgcacactcctggcagatatggcaggctgatcctgctctcgaaatcc
agtgaaaacattttggagctacccaatcaggtcctacaggtacataaatcggtgctggat
ttgaaagttaattacaaaggttttaattacactttcgctcatctgtgtgtcatgagcaat
cgggacaagacatgtcttttggatgatattatttcgattttcgaggacctccagcaagct
gccgcttcaaatagcacaccttcttccagagtgcaagtcagctatccaaacaccagatta
aaggatggcaggatctctttcattggccaccagctgggaggggtcacattcgctgcaaat
agcaaagatcagcaattcaagactgccagagcagtccagatcacttactacctccacaac
tatggcaacgcaaaccaggacatcattgctgagaaatgggaaaatgaattctgcaagctc
ttgctcaaactctctgcagtgaacgaagacatttatatccaatcactgacctcattcagt
ctctggagagattttaataaaacgggcatgttggcaaggagtgaggtgttggtgagtctg
gtgctgattctgctggcagccacagtctccagttctatgagggactgccttcgaggaaag
cctttccttgggctgctgggagtttttactatctgtatcgccaatgttactgcagcaggg
atatttttcattacagatggaaagtataattctacactgctgggagtccccttctttgct
atgggtcatggaacaaaaggagtttttgagctgcttgcaggatggagaagaactcgagaa
aaccagcctttcaaagaaagagtagcagatacctttgcagatgtgatggtttgctacacc
atgactagctccatgtacctccttacatttggcatgggggccagtcccttcaccaatata
gaatcagtgaaaatattctgccagaacatgtgtgttacgatccttgtgaactacttctat
gtcttttcattttatggctcatgcttggtcttcgctggccagctggaacaaaacagatac
cacagtgtgttctgctgcaaaataccatcttcagagtatttagaaaggcagcctacatgg
ttcaagacaatgatgagtgatgggcatgatctttctacacatcacgacagtgtcccctat
caaaatcacttcattcagcacttcctacgggaacactacacggaatggattaccaatacg
tatgtgaagccatttgttgtaatattatatctaatttatgcatcattttctttcatgggg
tgtttacaaattagtgatggatcaaacatactcaacctcttagctagtgactcaccaagt
gtctcctatgcacttacccagcaaaaatacttcagtaactacagtcctgtaattgggttc
tatatttatgagccaatagagtactggaacacaactgtacaagaacatttaaatacatta
ggtcatgggtttaatagaatatcatggattgatcattactttcagcatttaaaagtcatc
aatattactactccaaccaaaagcgattttataactgttctgcaaaattcattcttgata
aaaaaagaatttcagcactttaaggatgacatcattttttccaaaacaggggatgaagtc
gatatcattgcatccaggatgtatatggttgccagaaccagcgagaacacaagggaagag
gtcgttgaattgctggatcggctaaggccattgtctcttatcaacagcatcaaatttatt
gtgtttaatcctacctttgtgttcatggatcgctacagctcctccatcatatcacccatt
ctgacgtctggatttagtgtcctgattgccttagtcctgaccgtcttcctagttattaat
ccacttgttattaatccacttggtaacttttggttgataatcacagtcacctcagtagag
ttaggcgttcttggcttgatgacgttatggaacgtagacatggatagcatatctattctg
tgccttatttacactttgaatttcgcgatggatcactgtgcacctcatctttatactttt
gtattggcaaccgagcacactaggactcagtgcataaagatctccttggaggagcatggg
gcagccattttgcaaactgcatcctgttttctcattgggctgatgccccttttgtttgtg
ccttcaaacttgacctttacactgtttaaatgctctttacttaccgccgggtgtacagtg
ctgcactgctttgtgatattacctgtttttttaacattttttccaccatcaaaaaagagg
cagaagaaaaaaaaacgtgcaaagagaaaagagagggaggaaattgaatgcatagaggtc
agagatcatcctgatcacgtgactagtgtttga
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