KEGG   Acipenser ruthenus (sterlet): 117402291
Entry
117402291         CDS       T07327                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117402291 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:arut03009]
    117402291 (wdr43)
Ribosome biogenesis [BR:arut03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    117402291 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Utp12 WD40_Prp19 WD40 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_WDR36-Utp21_2nd Beta-prop_VPS8 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st ASA1 Beta-prop_WDR75_2nd SGL Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st Paf1 CFAP251_N Hira NBCH_WD40 Mat89Bb
Other DBs
NCBI-GeneID: 117402291
NCBI-ProteinID: XP_033859183
LinkDB
Position
5:complement(12328506..12342950)
AA seq 661 aa
MATDGGSSVFVSPCAFSPKSHQYLALSTQDGSLRVWDTQSNTLYQEYVPSAHLSATCTCL
AWGPCRTFKDGPQRKKRKSEVAQHGGQLDLLALGTAAGTVLLYSTVKGQLHSKLDGGHDS
KVNCVRWHPENNSLYSCSDDSHIVEWDLQTGKVKCKWKADKCAVSCLCLSPDGKMLLSAG
QTIKMWDLETKEVYRRFTGHATAVSMLCFATTRPPTRGMEGLYFLSGAAHDRMLSVWQVR
SDGKDKNAVLSFTLTDEPIYVDLAMSQSKDEAVKLAVVCKDNQMHLFEHVLNGHCKKPLS
PSCSVQVASPGSVGDSVPWPVPIMAAALTIDKQALLLAYGSGLQPVIERTTLNAGETHVC
LVRDIQASLTLRTETTVTKVKTPTVKADAKLLVPGLPGHSAPNKSTPLETKRKPGSDTKE
MSIEERLGVIDLSPVEGHKGVHKGGLPLQTDSFAVLLVQGLESSDSNILNKVFQTKKEVL
IKKTVARLPIPAVLPLVQELSKRMQGHPYSGVLMVRWLKAVFTFHASYLSTLPSLVSQLG
VLYHMIESRVKMFHKLSRLHGKLYLLITQIAATDKSHSVAALDQTAKLVYEEDSSEEEEE
GTGDEMLAEEEDSDHWEEEEEMKEVTERSDKGEEHSDEEMNMENKLNGDSDLEPDNESEE
E
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggcgactgacggaggaagttctgtgtttgtttctccctgtgctttttctcctaaatcg
caccagtatcttgccctgtccacgcaggacggcagtctccgggtctgggacacccaaagt
aacactctgtaccaggaatacgtgccttcggcccacttgagcgccacttgtacctgttta
gcttggggaccatgcaggacattcaaggatggccctcagaggaagaagaggaaatcggaa
gtggctcagcacggcggccagctggacctgctggcactgggcactgcggcgggcaccgtc
ctcctgtacagcacagtgaagggacagctacacagcaagctggatggtggtcacgacagt
aaagtgaactgtgtccggtggcatccagagaacaacagtctgtacagctgctctgatgac
tcccacatagtggaatgggacctacagactggcaaagtgaaatgtaagtggaaggcagac
aagtgtgcggtgagctgcctgtgcctcagtcctgacgggaaaatgctgctctccgctggg
cagaccatcaagatgtgggacctggagaccaaggaggtgtaccgacggttcacgggtcac
gccaccgcagtgtccatgctctgcttcgccaccactagacccccgacccgcggtatggag
ggactgtacttcctgtctggagcagcacatgaccgtatgcttagtgtctggcaggtgcgg
tcggatgggaaggataagaatgccgtgctgtccttcaccctgacagacgaacccatctat
gtggacctggccatgtcccagagcaaagacgaggcagtgaagcttgcggtcgtttgcaag
gacaaccagatgcacctctttgagcacgtcctcaatggtcactgtaagaagcccctctcc
ccctcgtgttcagtccaggttgcctctcctggttcagttggtgacagtgttccttggccg
gtccctatcatggctgccgccctgactattgacaaacaggccctgctcctggcctacggg
agtggcctgcagcctgtcattgaacgcaccactctgaatgctggagagactcacgtgtgt
ctggtgagggatatccaggcctcgctgacactccgcacagagaccactgtcaccaaggtg
aagactcctacagtcaaagctgatgccaagctcctggtaccagggcttcctgggcacagt
gcacccaataaatctacccccctggaaacaaagaggaaacctggttccgacaccaaagaa
atgtccatcgaggagcgcctgggtgtgattgatttatccccagtagaaggacacaagggc
gtccacaaggggggtctccctctccagacagacagctttgcagtgctgctggttcagggc
ttggagagcagtgacagcaacatcctcaacaaagtgtttcagacgaaaaaggaggtgttg
ataaagaagacggttgccaggttaccaatccctgctgtgctgccattggtgcaggagctc
tcaaagagaatgcaaggccacccttatagcggggtgctgatggtccgatggttgaaggct
gtcttcactttccatgcctcctatctctcaacgttgccgagcctggtgtcccagctggga
gtgctgtatcacatgatcgagagcagagtcaagatgtttcacaagctgtcccgtctccac
gggaagctctacctgctcatcacacagattgcagctactgacaagtcacacagtgttgca
gccttggaccagaccgccaaactcgtctatgaggaagattcttcggaagaggaagaggag
ggaacaggagatgagatgctggctgaggaggaagactctgatcactgggaagaggaagag
gagatgaaggaagttacagagcggtcagacaaaggagaggagcacagtgacgaggagatg
aacatggaaaataaactcaatggagattcagacctggaaccagacaacgagagcgaggag
gaatga

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