Acipenser ruthenus (sterlet): 117402353
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Entry
117402353 CDS
T07327
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117402353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117402353
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
117402353
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
117402353
NCBI-ProteinID:
XP_033859303
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Position
5:65421959..65458234
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AA seq
593 aa
AA seq
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MLPSQAGTAPAGNGSGSSKGNAGHGVGVIGSGVATSLARAGLVGVSGGVGRSGNGPAMLG
GNGAAGGSRGGQRAGNGAGLAGLQGAGAGGLGSMGSVVGGQGVSRFDPDRETSAMGFSGS
DADSDSADDDELAGLGQGTISRGVKRERAEIESGVMGQGAGTPAGGYSGVSGGVAGAKPG
KKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTF
ATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSG
ETKDTLKPAFTVASLPGTSTCNPTAPTTTTMQVSSGASFPITNYLAPISASGNANSITSA
NGTVLKTAATSGGVMQLPSGFTFMSGTPLPPGTPTIPISQLQSHSLAIQGQPGQTITGAQ
GQQTVFRFPASVSLAGGTVTQQLQAIQVHSSTQHSTGTTDTGPENSQASSSSAVSLPATI
VTSSVPTTMAGHMMYPSPHTLMYASTPALADGSLAVLNAFTQAPSAMQVSHGQVQEQGGV
PQVFLTGPPGTVQIPVSAVQLHPMVIGQQSSNSSHLTELQVVNLDAAHNSKSE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgctacctagccaggctgggacggcaccagcagggaacgggtcaggatcgagcaagggt
aacgcgggtcacggggtaggagtgattgggagcggggttgctaccagcttggcaagagca
gggttagttggagtcagcggtggggttggtcgatcggggaacgggccagcgatgttgggg
ggcaacggggcagcagggggttctcgcggggggcaacgggccgggaacggggcaggactg
gcgggattgcaaggagcaggagcgggggggctcgggagtatggggtcagtagtcgggggg
caaggggtaagcaggtttgaccccgaccgggaaacctcagccatggggttcagcggctcg
gacgccgattcagactctgctgatgacgatgaactggcagggttgggtcaggggaccatc
agccgaggggtgaagcgggagagagccgagatagaatccggcgtaatggggcaaggagcc
gggacgccagctggaggctacagcggtgtgtcaggtggggtggctggggcaaaacctggc
aaaaagacgcgaggaagagtcaagattaaaatggagtttattgacaacaaactgaggcgt
tacacgactttcagcaaaaggaagactggcatcatgaaaaaggcgtacgagctctcaaca
ctgacgggcacacaggtgctgctgctggtggcgagcgagacgggccacgtgtacacattc
gccacgcgcaagctgcagcccatgatcaccagtgagacgggcaaggcgctgatccagaca
tgcctcaactcccccgactctcctccccgctccgaccccaccacagaccagcgaatgagc
gccactggcttcgaggagacagacctcacctaccaggtgtccgagtctgacagcagcggg
gagaccaaggacaccctaaagcctgccttcacggtggccagcttgcctggcacctccacc
tgtaaccccacagcgcccaccaccaccaccatgcaggtgagcagcggagcctccttcccc
attaccaactacctggcgcctatctctgccagcggcaacgccaacagcatcaccagtgca
aacgggacggtgctcaaaacggcagccacctctggtggagtcatgcagctccccagcggc
ttcaccttcatgtcaggcactccgctcccccctggcacccctaccattccgatcagtcag
ttacagtcgcactcgctggccatccagggtcagcccggccagaccatcactggggctcaa
gggcagcagacagtcttccgcttcccagcgtccgtctcgctagcagggggcacagtgact
cagcagctacaagcgatccaggtccactcctcgacgcagcacagcaccggcaccactgac
accggccctgagaactcgcaggcctcctccagctctgcagtcagcctcccagccacgatc
gtgacgtcgtctgttcccacgacgatggcgggtcacatgatgtaccccagtccccacacg
ttgatgtatgcctccacgcccgcgctggctgacggcagcctggccgtgctgaatgcattc
acccaggccccctccgccatgcaggtctcccatgggcaggtgcaggagcaaggtggagtc
cctcaggtgttcctcacaggccctccaggaacggtacagatacccgtctcagctgtgcag
ttacatccaatggtcattgggcagcagtcgagtaacagcagtcacctgacggagttgcag
gttgtgaacctggacgctgcacacaactccaagagcgagtga
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