Acipenser ruthenus (sterlet): 117402387
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Entry
117402387 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 54-like isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117402387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117402387
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117402387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
PAH_ZNF598
UvrD_C
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117402387
NCBI-ProteinID:
XP_033859359
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Position
5:complement(75257972..75272965)
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AA seq
359 aa
AA seq
DB search
MNFAVGYKPMLGDSNTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTASSGGRFRCPSCRHEVILDRHGVYGLQRNLLVENIIDIYKQESSRPIHTKL
EQQLMCEEHEEEKINIYCLTCETPTCSMCKVFGAHKDCEVAPLQNVYQQQKTELSDGIAV
LVAGNDRIQAMISQLEGICKTIEDNGQRQKQHLCEKFDALYSVLEERKKELLLCITREQD
EKLGHVRALSRQYGDYLEGASKLVETCIQSMEEQQMAAFLQHAKELIKKMTDTAKASNME
RTEPGYENMDHFIINTEDVSGMLRTIDFQQVSQGGDNEPVYEAEEEEEVAQQSTNAQVQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcagtaggctacaaaccgatgctgggggactcgaacacgatggataacctg
gagaagcagctcatctgccccatctgcttggagatgttcaccaagcccgtggtgatcctg
ccctgccaacacaatctctgcaggaagtgtgccaacgacgtcttccaggcttctaacccg
ctgtggcagtcgcgaggctccacaactgcgtcctcgggggggcgtttccgttgcccttcc
tgccgacatgaagtgatcctggaccggcatggtgtctacggactgcagaggaacctcctt
gtggaaaacatcatcgatatctacaaacaggagtcctccaggcccatccacaccaagttg
gagcagcagctgatgtgtgaggaacatgaggaagagaagattaacatctactgcctgacc
tgcgagacgcccacctgctccatgtgcaaggtgttcggagctcataaggactgtgaagtg
gctcctctacagaacgtttatcaacagcaaaagactgaactgagtgatggcattgctgtg
ctggtggcgggaaatgaccgaatccaggctatgatctcccaactggagggaatttgtaaa
actattgaggacaatgggcagcggcagaagcagcacctgtgtgagaagtttgacgctctc
tacagcgtgctggaggagaggaagaaggagctcctgctgtgtattacccgggagcaggat
gagaagctgggccatgtcagggctctgagccggcagtacggggactatctggagggagca
tccaagctggtggagacatgcatccagtccatggaggagcagcagatggccgctttccta
cagcatgctaaggaattgattaaaaagatgacagacactgccaaagcatcgaacatggag
aggactgagccagggtacgagaacatggatcatttcataatcaacactgaagatgttagc
ggcatgctgagaaccatagacttccaacaagtgtcccagggaggtgacaatgaaccggta
tatgaggctgaggaagaagaagaagtggcccagcaaagcaccaatgcccaggtccagtga
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integrated database retrieval system
