KEGG   Acipenser ruthenus (sterlet): 117402654
Entry
117402654         CDS       T07327                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''-like
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117402654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arut03041]
    117402654
Spliceosome [BR:arut03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117402654
 Complex B
    117402654
 Complex C
   U2 SnRNP specific factors
    117402654
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5 DUF4523 PEX14-like_2nd xRRM RRM_PARP14_3 U3_snoRNA_assoc RRM_NFXL1
Other DBs
NCBI-GeneID: 117402654
NCBI-ProteinID: XP_033859899
LinkDB
Position
5:complement(20301264..20308448)
AA seq 220 aa
MDIRPNHTIYINNVNDKIKKEELKRSLYALFSQFGQIVEIVALKTMKMRGQAFVVFKELA
SATNALRQIQGFPFYNKAMRIQYAKTDSDVISKMRGTFGDKDKKKDKKKKAQEQAASAAK
KPAQGSTNVQTTSSQNQQAPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPG
RHDIAFVEFESEGQAGTARDALQGFRITSSNAMKITYAKK
NT seq 663 nt   +upstreamnt  +downstreamnt
atggatataagaccaaaccacaccatttacatcaacaatgtaaatgataaaattaaaaaa
gaagaactgaagaggtcactatatgcactgttttctcaatttggtcaaattgttgagatc
gtggctttgaagactatgaaaatgagaggacaggcatttgttgtgtttaaagagcttgcc
tctgctacaaatgctttgaggcaaatacaaggatttccattttacaacaaagccatgcgc
attcagtacgcaaaaacagattcggatgttatttcaaaaatgcggggcacgtttggtgac
aaagacaagaagaaagataagaagaagaaagcgcaagaacaggcagcaagtgcagccaag
aaaccagcacagggatccacaaatgtgcaaacaacttcatctcaaaatcagcaggcacca
gacaacccaccaaactatattctgttcctcaataatctgcctgaagaaactaatgaaatg
atgttgtccatgctttttaaccagttccctggcttcaaagaggtacgcctggtgcctgga
cgtcatgacattgcctttgttgagtttgaaagtgaagggcaagctggcactgcaagagat
gcactacaggggttcaggatcacatcctccaacgcgatgaagatcacttatgccaaaaaa
taa

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