Acipenser ruthenus (sterlet): 117402937
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Entry
117402937 CDS
T07327
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117402937
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117402937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
117402937
NCBI-ProteinID:
XP_033860520
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Position
5:complement(72248686..72259857)
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AA seq
1032 aa
AA seq
DB search
MGVNELWSILEPVRESVPLHSLSGKTLAVDLSLWVCEAQAVRGMMGKVTKPHLRNLFFRV
SCLTLMGIKLIFVMEGEAPKLKADTMSKRNAVKYGTSGKATTRPGKTGRSHFKFLLKECA
ELLDCLGVPWVTAAGEAEAMCAYLNVHGYVDGCITNDGDVFLYGGQTVYRNFNTNTKDPQ
LDCYRVSRIKSELGLERETLVGLAILLGCDYLPKGIPGVGKEQSMKLIETLKGETLLQRF
KQWTDEFQDFKTSEKAAEKVTHCQVCHHPGSAKDHGRNGCKLCNSKQFCEPQDYDYCCPC
DWHLAEGERQTNAAEISVKRKARVCEGFPFNEVIREFLISKDKPIKNIRWRKPNLFLMQN
LAWDKMEWPKPYTCERVLIMMTYTEMKNKKLAKESTTQIKPVRIFKSRVRNGVPCFEVIW
HKPEHYTFKDDHPADAQNTVNTIEEESLFQAAYPEIVDLYLKEKAKTEENKQKNKKRKPK
AQKSANTDDVADLLAQMTIQPSIKETSELGTNAEGEQHLNDSEEQEDDLRTFHCLSVLHN
SSITITSKETLCDNPTIVTEAKKTENKETAHSLSPVSSNKQHSLTTSSPALIEELQLSGI
DWGATSFGTASKEQHSLTASSPSALIEELQLSGIDWGATSFGTSPSAPVHKTLSATSKQG
DSLTPLQSSKDNECTKSLVHSTEKGEELTFCSGTMDHNSLCIDLKEHSSNPAANLPYSQF
SLRDRILLKNFNHSSTSQHRNNDVVSVSLKPLKYLTPVEQKNECPAVEKAPLSKPSVVES
QNFKGQKSVKEKLTGQKSCSKQVEKHASVKTSTHLVKHEGGEKKQHQKVFQSKTVENQHH
VKSTNQSKISSLPLSHKCDVPVNHTLVVAKNIKKSVIKKSVCHNLCSSSEDSDAENTSSI
VQKHQAQSKTKQRCVSSSDEKIKTTKMASKLCAKKAFSHIEAPLSSKRYLGQIANSQTQK
NEKLLTTNAKPSVEIEKEKQRFPSGVNHCGIANCSQSPVHSSESRDSEGDDSIISLDSPL
PLSERIKLRFQN
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaatgaactatggtcaatcctcgagcctgtaagggagtcagtcccactacac
agtctcagtgggaaaactttagccgtggatttaagcctgtgggtatgtgaggcacaagcc
gtgagagggatgatgggaaaagtgacaaaacctcacctcagaaatttgtttttccgagtc
tcatgtctcacactcatgggaataaaattgatctttgtaatggaaggtgaggctccaaaa
ttgaaagctgacacaatgagtaagaggaatgcggtgaaatatgggacatcaggcaaggcc
actactagacctgggaaaacgggaagatctcatttcaaattccttctaaaagagtgcgct
gaattgctggattgtctcggtgtcccttgggtcactgctgctggagaagcagaagcaatg
tgtgcctacctgaacgtccatggctatgtggatgggtgcatcaccaatgatggtgatgtt
ttcctttatggaggtcaaacggtgtataggaacttcaatacaaatacgaaggatccacaa
ttagactgctatagggtttcaaggatcaaatctgaacttggtttggagagagaaacacta
gtaggcttagcaattctgctgggttgtgattatctaccaaagggcatcccaggagttgga
aaagaacaatctatgaagctgatagagacattgaaaggagaaactctgttgcagaggttt
aaacagtggacggatgaatttcaagatttcaaaacctcagaaaaagcagctgaaaaggtt
acccactgtcaagtctgtcatcacccaggttctgctaaggaccatgggcgcaatggctgt
aaactgtgcaacagcaaacaattctgtgagcctcaagactatgattattgttgtccttgt
gattggcatctggcagaaggagaaagacagacaaacgcagctgagattagtgttaaaagg
aaagctagggtatgtgaaggattcccgtttaatgaggttatcagagaatttctcatctca
aaggacaagcctattaaaaacattaggtggagaaaacccaatctttttttaatgcagaac
ttagcttgggataaaatggagtggccgaaaccctatacttgtgagagagtgttaataatg
atgacatacacggaaatgaagaacaagaagttggcaaaagaaagtaccacacagataaaa
ccagtaagaatattcaagtcaagagtaagaaatggtgttccttgctttgaagtcatatgg
cataaaccagagcactatacttttaaggatgatcaccctgcagacgctcagaatacggtg
aacacaatcgaggaggagagtctgtttcaagctgcctatccagagattgttgatctctat
ctgaaggaaaaagctaagacagaggagaacaagcagaaaaataagaaaagaaagcccaaa
gcacagaaatctgccaatactgatgatgttgctgacctattagctcagatgaccatacag
ccttccataaaagaaacctctgaactaggtaccaatgctgaaggagaacagcatctcaat
gattctgaagaacaggaagatgatctaaggacatttcattgtctgtctgtgttgcataat
tccagcataaccattacctcgaaggaaacattgtgcgataaccccacaatagttactgaa
gcaaaaaaaactgaaaataaagaaactgcacattctctatctcctgtatcgtctaacaaa
caacacagtttgaccacatcctcccctgctctgattgaggagttgcagctgagtggcatt
gactggggagctacatcttttggcactgcgtctaaagaacaacatagtttgaccgcatcc
tctccatctgctctgattgaggagttgcagctgagtggcattgactggggagcaacatct
tttggcacctcgccatcagcaccggtgcataaaacactgtctgcaacatctaagcaaggt
gatagcctaacacctttacaaagttctaaagacaatgagtgcacaaaatctttagtccac
agcactgaaaaaggagaggaattgacattctgcagtggaacaatggaccataattctctg
tgcatagatttgaaagaacattcatcaaatccggctgccaaccttccttattcacagttt
tccttaagagatagaattctgttaaagaactttaatcactctagtacatcacaacatcgg
aataatgatgttgtttctgttagcttgaagccactaaaatatttgaccccagtggagcag
aaaaatgaatgccctgcagttgaaaaagcaccacttagcaaaccatcagtggttgaaagt
caaaattttaaagggcaaaagagtgtaaaagaaaaattaacaggtcagaaatcctgttct
aaacaggttgaaaagcatgcctctgtaaaaactagcacacatctcgtaaaacatgaagga
ggtgagaaaaagcaacatcaaaaagtctttcaaagtaagactgtagaaaaccaacaccat
gttaaatctaccaaccaatccaaaatcagttccttgccactgagtcacaagtgtgatgtt
cctgtcaaccacacattggtggtagctaaaaacattaagaaaagtgtcattaaaaagagt
gtctgccataatttgtgttcttctagcgaagacagtgacgcagagaacacaagcagtata
gtgcaaaaacaccaggcccaatccaaaactaaacaaaggtgtgtgtcttcttctgatgaa
aagataaagacaaccaagatggcaagtaaactatgtgccaaaaaagctttttcacacatt
gaggccccactgtcgtccaaaaggtatttagggcaaattgccaacagccagacccagaaa
aatgaaaagctgctaactacaaatgctaaaccttcagtggaaattgaaaaggagaagcaa
aggtttccctcgggagttaaccactgtggtatagccaactgttcccagagcccagtgcat
agttctgaatctcgagacagtgaaggagatgattctatcatttcattagacagtccgtta
cctctgtctgaaaggataaaacttagatttcagaattaa
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