Acipenser ruthenus (sterlet): 117403100
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Entry
117403100 CDS
T07327
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117403100 (smc6)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117403100 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_29
TPR_MLP1_2
AAA_21
Crescentin
AAA_23
Motif
Other DBs
NCBI-GeneID:
117403100
NCBI-ProteinID:
XP_033860951
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All DBs
Position
5:76662457..76729405
Genome browser
AA seq
1095 aa
AA seq
DB search
MPKRKEKTLSATNQKKRLRIEEQEGVAGDEEDSEDLEQFQQEGYQFSSSSLGEIGIVESI
SLKNFMCHSLLGPFEFGSNVNFIIGNNGSGKSAILTALIVGLGGKATTTNRGLSLKGFVK
HGQSSADITIRLRNRGTDAFKGDVYGDSIIIEQRITCDGSRTCKIKSKLGQVVSTKKEEL
TAILDHFNIQVDNPVSILNQEMSKQFLHSKSEADKYKFFMKATLLEQMKGDYIHIKQTKA
ITRDQIETQEESLKDLKQIYLQKKERYENLSSLEEMQKNVEVLKHQMAWVLVKDIEIQKQ
KLKEQIEREENNDKYKVKVEQCQDEVHKAERKILETQDRLDKMKEEIDVLQSQCTSLKEV
AKKKSKAYNGQEAAYRRHQNKLKQMERERDLLQERIKELKTTVTQNLEAEHLERLNEMST
LQKRLKLLKAEGKETSQRIEERQQSLYKEKEELDKLRQEENRIRYSLDSSVKRLNQMKAG
RSNSLRRFGEHIPELLEAINTAHEQGRFTKKPVGPIGACIHLKDASLAVGVESCLRNFMK
TFCCDNYKDEKVLQGIMSRFYSKGNRPQIIVTSFASTPYDIKQRGVFHPEFPSVYQALHI
PNPVVANCLIDLRGIETILLIKDNDVARKVMQLGRPPKNCREAFTGAGDQVYKNRYYSDD
FSRAKYLGADLEEEIGLIESDLENQKAQLSRFQLHSNSVIDGIKLMEKELQILIAKRKKQ
QGSITPVELAISELENVEEPQSMDIDTLEEDVQDLLNKIESEQEKVNNAKKDMDKERKIM
EEADCSYQDMKNKIALLVEETEPIKEEQMKAEADANKLERQLKNLEKKQNEHQNYIQELQ
SKLADKEEELQDSIKQAIQICPERLQVERSAKSIDTEINRLRQRLNTEKNRHGNQNEIIG
EYFEALNNYKDNSSQVKDLKRFIDRLDNIMNERQARYKQMRRSLSLRCKFYFIDFLDTLK
CCGSMSFDHNNEALAISVQPPGRENGGMSDMRSLSGGERSFSTVCFILSLWEITESPFRC
LDEFDVYMDMKNRRISMDLMLKLAESQHLRQFMFITPQSTRTLPKSNLIKIHQLMDPERG
NKQQSEEDEEASQKS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagagaaaagagaagaccttgtctgcgactaaccaaaagaaaagattacggatt
gaagagcaggaaggagtagccggggatgaagaggattcagaggacctggagcagtttcag
caagagggataccagttttccagctcgagcttgggagagattgggattgtcgaaagcata
tctctgaagaactttatgtgccattctttgttggggccgtttgagtttgggtcaaatgtg
aactttattattggaaacaatggaagtggaaaaagcgccatactaacagctcttattgtt
ggtcttggaggaaaggcaactactacaaaccgggggttatctctgaagggatttgtgaaa
catggacaaagttctgcagatatcacaatacgtttgagaaacagaggaacagatgccttc
aaaggtgatgtctatggtgactccattattatagagcagcgcatcacatgcgatgggagc
cggacatgcaagataaagagcaagctagggcaagttgtttcaactaaaaaagaggagctc
actgcaatactggaccatttcaatatacaggtggataatccagtctccattttaaaccaa
gagatgagcaaacaatttttacattctaaaagtgaagcagataaatataagtttttcatg
aaggcaactttactggaacagatgaagggggattacattcacatcaagcaaactaaagca
ataacacgtgaccaaatagaaacacaagaagagagtctgaaagatctaaagcaaatttat
ttgcaaaaaaaggaacgttatgaaaatttgtcttcactggaggaaatgcaaaagaatgtc
gaagtcctgaaacatcagatggcttgggttctggtaaaggacattgaaatccagaaacaa
aaattgaaggaacagattgaaagggaagaaaacaatgacaaatataaagtgaaagttgaa
caatgtcaggatgaggttcacaaggcagaaaggaaaatcctagaaactcaagaccgtttg
gataagatgaaagaggagattgatgttttgcagtcgcagtgcacatctttaaaagaagtt
gcaaagaagaagagcaaagcttataatggacaagaggcagcttaccgtcgccaccagaac
aagctaaagcaaatggagagagaacgcgatctcttacaagagaggattaaggagctcaaa
actactgtgacccaaaacctggaagctgaacatttggaaagactaaatgaaatgtctaca
ctgcagaaacgcctgaaactgttaaaggcagagggcaaagaaaccagtcagagaattgag
gaacggcaacagtctctttacaaagagaaagaagagcttgataaactcagacaagaagaa
aacagaatacggtattctttagattcaagtgttaagaggctgaaccaaatgaaggccggc
agatctaatagtctcaggagatttggggaacacattccagaactacttgaagcaataaat
acagcacatgaacaaggccggtttacaaagaaaccagttggccccataggggcatgcata
cacctaaaggacgctagccttgcagtcggtgttgaaagttgcttaagaaattttatgaag
accttctgctgtgataactacaaggatgaaaaggtcctccaggggataatgtctcgattt
tattcaaagggaaacagacctcagattattgtcacctcttttgcaagcactccatatgat
ataaagcaaagaggtgttttccacccagaattcccttctgtatatcaagccttgcatata
cccaaccctgtggtggctaactgtctgattgacttgaggggaatagaaaccattctactg
atcaaagataatgatgtagctcgaaaagtaatgcagctaggaagaccacctaaaaactgt
cgggaagcctttactggagctggtgaccaagtctataagaaccgctattactcggatgac
ttcagcagggcaaagtaccttggtgcagatttggaagaagaaattggtctcattgagtca
gacttggagaaccagaaggcccagctatcaagatttcagctccattcaaattctgtgatt
gatggcatcaagctgatggaaaaagagttgcagatcctcattgccaaaagaaaaaaacaa
cagggaagtataactccagttgagttagctatatcagaactggaaaatgtagaggaaccc
cagtcaatggacatcgatactctggaagaagatgttcaggatctcctgaataaaatagag
tctgagcaagagaaggtgaacaatgcaaagaaagacatggacaaagaaagaaagattatg
gaggaagcagattgcagctaccaagatatgaaaaataaaattgcccttttagttgaagaa
acagaaccaataaaggaagaacagatgaaagctgaagcagatgctaataaacttgagcgc
caattaaaaaatttggaaaagaagcaaaatgagcatcaaaactacattcaggagttacaa
agcaagcttgctgataaagaagaagaattgcaggatagtattaaacaagccatccagatc
tgccctgagcgcttgcaagttgaacggagtgcgaagagtattgacaccgagattaatcgc
ttgaggcagcgtttaaacacagagaagaatcgacatggaaaccagaatgaaattattggg
gaatatttcgaagcattaaataactacaaggacaattcaagccaggtgaaggacttaaag
aggttcatagatcgacttgataacatcatgaacgagagacaggcaagatacaaacaaatg
cgacggtcactttccctcagatgcaaattctacttcattgattttcttgatacgcttaaa
tgttgcggatctatgtcattcgaccacaataatgaggcccttgcaatctcagtgcagcct
ccaggtcgagagaacggtggcatgagtgacatgcgctccctctccgggggagagcgttct
ttctcaactgtctgcttcatcctctccctgtgggaaatcacagagtctcccttcagatgc
ctggatgagtttgatgtctatatggacatgaagaaccgaagaatttcaatggacttgatg
ttgaaattggctgaatcacagcatctccgccagtttatgtttatcacgccacagagtacc
aggacattgcctaaaagcaaccttattaaaatccaccagcttatggaccctgaaaggggg
aataagcaacaaagtgaagaggacgaggaagctagtcagaaatcctaa
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