Acipenser ruthenus (sterlet): 117403121
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Entry
117403121 CDS
T07327
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04517
IgSF CAM signaling
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117403121 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117403121 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117403121 (sptbn1)
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117403121 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
117403121 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
NPV_P10
PH_11
Motif
Other DBs
NCBI-GeneID:
117403121
NCBI-ProteinID:
XP_033861023
LinkDB
All DBs
Position
5:15738397..15841417
Genome browser
AA seq
2361 aa
AA seq
DB search
MELQRASSMPGHLSPGFSPSPSPSLSPSPSPGPGFTAQVPFNYNQLEGRFKQLQDEREAV
QKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLEN
VDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDIRVETEDNKEKKSA
KDALLLWCQMKTAGYQNVNIRNFTTCWRDGMAFNALIHKHRPDLIDFDKLKKSNVHYNLQ
NAFNLAEQHLGLTKLLDPEDISVDQPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLD
NAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPK
FTEKGNLEVLLFTIQSKMRANNQKVYLPREGKLISDINKTWERLEKAEHERELALRTELI
RQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGYDLQAVEAATKKHEAIETDIAAYE
ERVEAVLAVARELEAENYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQKVFQ
EMLYIMDWMDEMKVLLLSQDYGKHLLGVEDLLQKHTLVEADIGIQADRVKAVNASAQKFA
SDGEGYKPCDPQVIRDRVAHMEFCYQELCQLAVERRARLEESRRLWKFFWEMAEEEGWIR
EKEQILSSDDYGKDLTSVLRLLSKHKAFEDEMSGRYTHLQQTIREGEDMISDDHFGSDKI
RERIMDIKEQWANLEQLSAIRKKRLQEASNLHQFQADADDIDTWMLDVLRIVSSSDVGHD
EYSTQSLVRKHKDVAEEIASYRPVIDTLEEQSKALPEEHAQSPEVLSRLSGIEERYKEVT
ELTRLRKQALQDALALYKMSSEADACELWIDEKEQWLISMQIPEKLEDLEVIQHRFESLE
PEMNNQASRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFRDLVDQKKDSLSSAL
GVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIEDKLSDL
QKEAERLAAEHPDQAQAIMGRLAEITDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQ
SWLSRTQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDA
QYMFLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHT
ELPNTLESAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNISSDKIQEKVDSIDD
RHKKNREAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLK
HQAFMAELQSNKEWLDKIEKDGMQLVAEKPETEVVVKEKMSSLHKMWDDLESTTQTKAQC
LFDANKAELFTQSCADLDKWLMGLEGQIHSDDYGKDLTSVSILLKKQQMLENQVEVRKKE
VEELQGQAQVLSLEGKDTDEVDSRRQVVEQKFNELLAPLQQRKSYLMASKEIHQFNRDVE
DEILWVEERMAVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNILTDG
SPNAEAIRQRLAGLQELWNLMIEETEKRHARLEESHKAQQYYFDAAEAEAWMSEQELYMM
SEEKAKDEQSAVAMLKKHQILEQAVEDYAETVHQLSKTSRALVAAGHPESERIGMRQSQV
DKLYAGLKDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTML
QERFREFARDTGNIGQERVDAVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDT
RTQILAASYELHKFYHDAKEILGRIDDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQAL
GTQVRQLQEDAARLQSAYAGDKADDIQKRENEVLEAWKMLLDSCEGRRVRLFDTGDKFRF
FSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKS
LLARKHYASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQ
EPYVSSREIGLSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEER
RRKPPSPEPLPQPAEDSESPQQWDGKGEQISQNGLPSDQESPRATDAVDAGEIVNGVAEQ
RTSSKEPSPTPSPSSNRKARGSIQAATLPAKPQDTTSTQMEGVLHRKHEWEGHNKKASSR
SWHNVYCVINNQEMGFYKDSKNASQGIPYHNEIPVSLKEAVCEVAIDYKKKKHVFKLRIT
DGNEYLFQAKDDEEMNTWIQAISLANTWDKSEVSQSSQSTPASSRAQTLPASVTVTGDSS
PGKREREKDKEKRFSLFGKKK
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atggaattacagagggcatccagcatgcctggacacttatcccctggatttagccccagc
cccagccccagccttagccctagccctagccctggacctggcttcacagctcaggtacca
ttcaattacaaccagctggaaggaagatttaaacagttgcaagacgaacgtgaagctgta
caaaagaagactttcacaaaatgggtgaattcgcacttggcgcgtgtatcctgccgaatc
acagacctgtacatggacctgcgcgatggccgcatgctaatcaaactgctggaagtgctc
tctggggagaggcttcccaagccaacaaagggaagaatgcgtatccactgtctggagaat
gtcgacaaggcccttcagttcctcaaagaacagagggtgcatttagagaacatgggatca
catgatattgtggatgggaatcacagactgacgcttggtcttatttggaccatcattctc
aggttccagattcaagatatcagagttgagactgaagacaacaaggagaagaaatctgcc
aaggatgccttgctgctgtggtgccagatgaagactgctggctatcaaaatgtcaacatt
cgcaacttcaccacttgctggagagacggcatggctttcaacgcacttattcacaaacat
aggcctgacctgattgattttgataagctgaagaaatccaacgttcactacaatctgcag
aacgctttcaaccttgcagagcaacaccttggtctcaccaagctcctggacccagaagat
atcagtgtggaccagcctgatgaaaagtccatcatcacttacgtggtaacatactaccac
tacttctccaagatgaaggctttggctgtagaaggaaagcgtattggaaaggtgctcgac
aatgccattgagacagagaagatgattgaaaagtacgagtccctggcttctgacctcttg
gagtggatcgagcagaccatcattatcctgaacaatcgcaagtttgccaactcacttgtt
ggtgtacagcagcagctacaggccttcaacacgtaccgcacagtggagaagccccctaag
tttacagaaaagggtaacttggaagtgcttcttttcaccattcagagcaagatgagagca
aacaaccagaaagtgtacctgcccagagaggggaaactcatctctgatattaacaagacc
tgggaaagactggaaaaagcagagcatgaacgggagctggcactgaggactgagttgata
aggcaagagaaactggaacagctggcccgccgtttcgaccgcaaggcagccatgagggag
acctggctgagtgagaatcagcggctcgtctcacaggacaactttgggtatgacctgcag
gcagtggaggccgccaccaaaaagcatgaagctattgagactgacattgcggcctatgaa
gaaagagtggaggcggtcctggctgtggccagggaacttgaagccgagaactaccatgac
atcaagcgcatcacagccaggaaagacaacgtgattcggctttgggagtaccttctggag
ctgctcaaggctcggcgccagcgactggagatgaacctggggctgcagaaggtcttccag
gagatgctttacattatggactggatggatgagatgaaggtgctcttgctgtcccaggat
tatggaaaacacttgcttggcgtggaagatctactgcagaaacacactctggttgaagct
gatattggtattcaggcagacagagtgaaggcggtcaatgcatctgctcagaaatttgca
agtgatggagaaggttacaagccatgtgacccccaggttatccgtgaccgggtggcccac
atggagttctgttatcaggagctgtgccagctggcagtggagcgcagggcccgtcttgag
gaatctcgtcgcctctggaagttcttctgggagatggcagaggaggagggatggatccga
gagaaggagcagatcctgtcgtccgacgactacggcaaagacctgaccagcgtgttgcgc
ctcctgagcaaacacaaggccttcgaggacgaaatgagtggccgatatacccacctgcag
cagacgatacgggagggagaagacatgatctctgatgaccactttggttctgacaagatc
agggagcggatcatggacattaaggagcagtgggccaacctggagcagctgtctgccatc
aggaagaaacgcctgcaggaggcctccaatctgcaccagttccaggccgatgctgacgac
attgacacttggatgctcgacgtcctccggatcgtctccagcagcgacgtgggccacgac
gagtactccacccagtcactggtaaggaaacacaaagatgtggctgaagagatcgccagc
taccgtcctgtcatcgacaccctagaggagcagtccaaggccctccccgaagagcacgcc
cagtccccagaagtcctgagcaggctgtccgggattgaggagaggtacaaagaggtcacc
gagctcaccaggttgcgcaagcaagctctgcaagatgctctggccctttataagatgtcc
agcgaggctgatgcctgtgagctctggatagatgagaaggaacaatggttgatcagcatg
cagatcccagagaaacttgaagatctggaagtaatccagcacaggtttgagagtttggaa
ccggaaatgaataatcaggcttcccgtgtggctgtggtcaaccagattgctcgccagctg
atccacagtggacaccctagcgagaaagaaatcaaagcccagcaggataaacttaatacc
agatggagccagttccgtgatttggtggaccaaaagaaagattctctcagttctgcattg
ggtgttcagaactaccacctggaatgtaacgaaaccaaatcgtggatcagggagaagacc
aaagtcattgaatctactcaggagctgggcaacgacctggctggagtcatggccttgcag
agaaaactgacaggaatggaaagagaccttgcagccatcgaagacaagctgagtgacctg
cagaaggaagctgaaaggctggccgcagagcacccggaccaggctcaagccataatgggt
cgtctggcggagatcacagacgtctgggaggagatgaagaccaccctgaagaaccgtgag
gagtccctgggtgaagccagcaagcttcagcagttcctgcgtgacctggatgacttccag
tcctggctctcgaggacccagaccgccatcgcctcggaggatatgcccaacaccttgacg
gaagcagagaagctgctcacacaacatgagaacatcaagaatgagatcaacaactacgag
gaagactatcagaagatgcgtgacatgggcgagatggtaacgcaaggccagacggatgcc
cagtacatgttcttgcgccagcgcctgcaggccctggacaccggctggaacgagctgcac
aagatgtgggagaacagacagagtctgctgtctcagtcccacgcctaccagctgttcctc
agagacacaaaacaagcagaagcattcctcaataaccaggagtatgtgttggcacacact
gagctgcccaacaccctggagtctgcagaggctgcaattaagaagcaggaggacttcatg
accaccatggatgccaatgaggagaagatcaacgcagtggtggaaacgggcaggagactc
gttagtgacgggaacatcagctctgacaagatccaggagaaggtggactccatagatgac
aggcataaaaagaaccgtgaggctgctagtgaactcctgatgagactcaaggacaacaga
gacctgcagaaattccttcaggactgccaggagctgtccctttggatcaatgagaagatg
cttacagcgcaagacatgtcatatgacgaagccaggaacttgcatagcaaatggctgaaa
caccaggcgttcatggccgagctgcagtccaacaaggagtggttggacaaaattgaaaag
gacggaatgcagcttgttgcagagaaaccggagactgaggtagttgttaaggagaagatg
tcatcccttcacaaaatgtgggacgacctggaatccaccacccagaccaaggcacagtgt
ctcttcgatgccaacaaggcagagctgttcacccagagctgtgctgaccttgacaagtgg
ctgatgggtctggagggacagatccactccgacgattacggcaaagacttgaccagcgtc
agcatcctgttaaagaaacagcagatgctggagaaccaagtggaggtgcggaagaaggag
gtggaggagctgcagggccaggcccaggtcctgagtctggaaggtaaagacacagacgag
gtggacagcaggaggcaggtggtggagcagaagttcaatgagctgctggcaccactccag
cagaggaagagctatctcatggcctccaaggagattcaccagttcaacagagatgtggag
gatgagattttgtgggttgaagaaagaatggcagttgcaacttccacagaccatggtcac
aacttacaaaccgtacagcttcttatcaagaaaaatcagactcttcagaaggaaatccaa
ggccatcagccacgtattgacgacatcttcgagaggagccagaacattctcactgacggc
agccccaatgctgaagccattcgacagaggctggcggggctgcaggagctgtggaatctc
atgatcgaggagacggagaaacgccacgcccggctggaggaatcccacaaggctcagcag
tactacttcgacgctgcagaggccgaggcctggatgagtgaacaggagctgtacatgatg
tcggaagagaaggccaaggatgagcagagcgcagttgcaatgctgaagaaacaccagatc
ttggagcaggctgtagaagattatgctgagacagtgcaccagctctctaagaccagccgg
gcattggtagcagctggacatcctgaaagtgaacgtatcggcatgcgacaatcccaggtg
gacaaactctatgccggcttgaaggacctgtctgaagagaggaggggcaagctggacgag
aggcatcggctcttccagctgaaccgagaggtagacgaccttgaacagtggatcgcagag
agggaagtggtggccgggtcacacgagctgggacaagattacgaacacgtcactatgctg
caagagcgtttccgtgagtttgcccgcgacaccggcaacatcgggcaggagcgagtagat
gccgtcaaccacatggcggatgagctgatcaattccggacattccgacgctgccacgatc
gcagagtggaaggacggtctcaatgaggcctgggcagacctcctggagctcattgacact
agaacacagatcctggccgcctcttacgaactgcacaaattctatcacgatgccaaggag
atccttgggcgcatcgacgacaaacacaagaagttgcctgaggagctgggacgagaccag
aacacagtggaagcactccagcgaatgcacacaacattcgagcatgacatccaggcattg
ggcacacaggtgagacagttgcaagaggatgctgcccgtcttcagtccgcctatgcagga
gacaaggctgacgatatccagaagagggagaatgaagtgctggaagcctggaaaatgctg
ctggattcctgcgagggccgtcgggtccgactgtttgacaccggggacaagttccgcttc
ttcagcatggttcgagacctcatgctgtggatggaggacgtcatccgtctgatcgaggcc
caggaaaaacccagggacgtgtcgtcggtcgagttactgatgaataaccaccaggggatt
aaagcagagattgatgcccgtaacgacagttttactacctgcattgagcttggcaagtct
ctcctggcacggaaacactacgcatcagaggagattaaagagaagttgttacagctgacc
gataagagaaaagacatgattgacaagtgggaagacagatgggaatggctaagactgata
ctggaggtgcaccagttttcccgggacgctggtgtggcggaagcctggctgttggggcag
gagccctacgtgtccagccgagagattgggttgagtgtggatgaggtagagaagctgatt
aagagacatgaggcctttgagaagtcggcagctacttgggaagaaagattctctgcactg
gagagactgacaacactggaattactggaagttcggagacaacaagaggaagaggagagg
agaaggaagcccccgtcaccagagcccctcccccagcctgcagaggactcagagtcacca
caacagtgggacggaaaaggagagcagatctctcagaatggattgccgtcggaccaggag
tctccacgggcgacagatgctgttgatgcaggtgaaatcgtgaacggagtagcagagcaa
aggaccagctcgaaagagcccagcccgactccctccccatcatcgaaccgcaaagccagg
ggttctattcaggcagccacactgccagctaaaccacaagatacaacctctactcagatg
gaaggggtgctgcatcgcaagcacgagtgggagggacacaataagaaggcatccagcaga
tcctggcacaatgtttattgtgtgataaacaaccaagaaatgggcttctataaagattct
aagaacgccagtcaaggcattccataccacaacgagattccagtcagcttgaaagaggcc
gtctgtgaggtggccatagactacaagaagaagaaacatgtctttaagttacgaataact
gatggcaatgagtacctcttccaagccaaagacgatgaggaaatgaacacctggattcag
gccatctcattagcaaacacctgggataagtcagaggtgtcccagagcagccagagcact
ccagcctccagccgtgcacagaccctgcccgctagtgtcaccgtgacaggcgactcgagc
cctggcaagagggagagggagaaggacaaggaaaagagattcagcctgttcggcaagaag
aagtaa
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integrated database retrieval system
