Acipenser ruthenus (sterlet): 117403301
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Entry
117403301 CDS
T07327
Symbol
lama4
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
arut04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117403301 (lama4)
04518 Integrin signaling
117403301 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117403301 (lama4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_I
Laminin_II
EGF_LMN_ATRN
Laminin_G_3
TS_C
Motif
Other DBs
NCBI-GeneID:
117403301
NCBI-ProteinID:
XP_033861242
LinkDB
All DBs
Position
5:complement(81921652..81967603)
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AA seq
1883 aa
AA seq
DB search
MAFICFSLLCFLSMLLRLFSPATGERGQQSTVVNVCGKGYFLYELETCLPCSCNGHSNSC
QDVTGICNNCQNSTAGDYCEECLAGYVHDTAEEGQLICKPCACPFPISSNNFAVSCEKKG
SAVRCMCKEGYAGPICERCAPGYYGNPLLVGGNCKKCNCNGNSDPNLIFNDCHNTTGHCQ
NCWHKTTGVNCERCAPGYYGDAIGAKSCRECNCDTCGTESCDHRTGSCYCKPGVTGPYCD
RCEVGHYGFSSCHGCRRCVCGVASVNEICNPVTEACVCQPGAAGLRCERCKNGYWNYGPS
GCQKCDCAGGSCNSETGQCLSVPVIPPSTNACDITCDKCIWDLIEDLRFSNESMKEIKAN
MVNISSGAAANNRLNHLNTTTQHLKSQLSGWRNRSEHRLLQTDDVEDVVANLQSDLNSLG
EKENIMISEGLEVEKETQDTYRRADHLEKQLIVVSKSIQEIIGKLIYYSSQHDLSAEEST
WRKEDAEEMVNTMRKLNLSLNEPIATEESMKAIQILRRVLQLEKKLNSTTGLVSPIQHEL
SELSSRLSDTRELLEGAVRTTQQAEEKHKENLVRFQENENLQQKLRKDYGHANETLRVAG
DIIIDTGLDVGELETMIKNVSEFHAAIDGANKLLREREANLSRYDKDLVHRATDYAKELR
KLAAELENYLKNIDANGFVQKAINASNVYENIAKYVEEANETAVITFNYTERAEDAIFGI
NTQIGFLKDRSETLLIEATKLMQSEEETDNEAAVRAAKININGLIAEVVSIKQELSESSS
QLNTIQRGNTAQRLEYSKRIAENTLNKTAMVLQTVTPINETVQGWARNLDNSEYDTSAYN
RAVSAAGEAVENLTDMVPELLDKLRVVEQKKPMSNISSSILRIRQLIAQTKSLASKVQVS
MRFDGLSAVEVHPKTKLEELKTFTSMSLFMKVDSEKHKGQDRFIMYLGNKNGRKDYMGLA
IKNDNLVYVYNLGGGDVEIPLSSKPISTWPPQFNLIKTERLGRHGKVFLTVPSPGSTAEQ
KFIQKGEAPGTESLFDLDPDNTVFFVGGVPPDFRLPASLNLSPFIGCIELAALNKDVMSL
YNFKNKYKIDTAASPPCPRYKLAFTQSRAANYFFDGTGYALVRNIEKREKFGKILTRFDL
GVRSVMDDALLLLMVNGSNFFTLEMQKGLLRIVYDFGFSNGPVVLEDNLKKIQINDARYH
EISVIYHNSKKIILVVDRGHVKSVENEKKSMPFSDIYIGGAPSEILHSRPELATLAGLRG
CLKGFQYQKKDFNLLEEAGTIGISSGCPEESLMSREAYFNGESFVASSQKISAFQMFEGG
FDFRTIQSSGLLFYYTEGSDEIAISLENGTVVLNTKGTKVRSEKNHYNDGQTHFLVASVT
PQRYQLIVDDKDRQSKSHQRSTQQQASAPSKFYFGGSPSGQYLNFTGCISNAFLSRPDRD
MEVEDFQRYTEKVQALLHGCPMEKPPAALYAKPDRNSSKPKRGRTSKVGRDRLSTPEVPD
SLKDNPEELRGKEEAHCYLSARPRATQHAYQFGGTANSRLEYGSIPAFFKERSHFSLSLR
TQSTHGLIFYVSNEEEDNFMALFLANGRLVYMFNVGNHKLKIKSQEKYNDGSWHNVVFTR
EKNEGRLIIDGLRVLEDTVSEAGAPWHVSGVFYVGGVPPGKAHKNIQINSIHSFTGCVKS
FQLNGQWLSSVSHTFGVTRCFNGPTESGTYFSAEGGYVVLDDAFNLGLKFELVFEVRPRA
SSGLLLHVYTSGGEYLNMHINHGQVIVQVHNGIREFATSVTPKQGLCDGRWHRIAVIRDA
NVVQLDVDSEVTHVVGPLNTRAMDSKAPVFIGGVPESLLPQSMLIRTAYIGCMRNLIINE
TPVSFSKAALVSGAVSVNSCPAA
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggctttcatttgtttctccttactgtgcttcttatccatgttgttgagactcttttct
ccagccacaggggaaaggggacagcaatctacagtggtcaatgtttgtggaaaaggatat
tttctttatgagctggaaacgtgtctaccatgcagctgtaatggtcactcgaacagctgt
caagatgtaacaggtatctgcaataattgtcagaacagcacagctggagactattgtgaa
gagtgtcttgctggatatgttcatgatacagctgaggagggtcagctgatctgcaagcct
tgcgcgtgtccttttccaatcagctccaacaactttgcagtttcatgtgaaaagaagggc
agcgcagttcggtgtatgtgtaaggaaggttatgctggacccatctgtgaaagatgtgcc
cctggttactacggcaaccctttattggttggaggcaactgcaagaaatgtaactgcaat
gggaactctgatcctaacctgatcttcaatgattgtcacaatacgactggccactgtcag
aattgctggcacaagactacaggagtcaactgtgagcgctgtgctcctggttactacggg
gatgccatcggcgccaagagctgcagagaatgcaattgtgatacgtgtggcacagagtcc
tgtgatcacaggaccggaagctgttattgcaagccaggagtcacaggcccttactgtgac
cgctgtgaggtcggtcactatggattcagcagttgccatggatgcaggaggtgcgtgtgc
ggcgtggcctctgtgaatgagatctgtaatcctgtgacggaagcctgtgtgtgtcagcct
ggtgctgctggcctgcgctgtgagcgctgtaagaatggctactggaactatgggccttct
ggctgccaaaaatgtgattgtgcaggaggatcatgcaacagtgaaacagggcaatgcctt
tcagttcctgttataccaccatctaccaatgcctgtgatataacttgtgataaatgtatc
tgggatttaattgaggacttgaggttttccaatgaatctatgaaagaaatcaaagcaaac
atggtaaacatttcgagtggagctgctgccaacaaccgcttgaatcacctcaacaccaca
acccagcacctcaagagccagttatctgggtggaggaaccggtctgagcacagattactc
caaacagatgatgttgaggatgtcgttgcaaatctacagtcagatttgaactctttgggt
gaaaaggaaaatataatgatctctgaaggacttgaagtagagaaggagacacaagacacc
taccgccgtgcagatcaccttgaaaaacagctaatcgtagtgagcaagagcattcaagaa
attattggcaagctgatctactacagttcacaacatgatctatctgctgaagaaagcacc
tggaggaaggaggacgcagaggagatggtgaacactatgagaaaactgaatctgtctcta
aatgaacccatcgctactgaggaatccatgaaagcgattcaaattttaaggcgtgttctt
cagctggagaagaagctgaacagcaccacgggcctggtttctccgattcagcacgagctc
tcagagctcagcagcaggctgtctgacaccagggagctccttgagggggcagtgagaacc
actcagcaggctgaggagaaacacaaagaaaaccttgtcagattccaggagaatgagaat
ttgcagcaaaagctgaggaaagactatggacatgctaacgagacactgcgggttgcagga
gacattataattgacacaggccttgacgttggcgaactggaaactatgataaagaatgtg
tcagagttccatgcagcgatcgatggggccaacaaactgttgagggaaagggaagctaat
ttgtcgagatacgacaaggacttggttcatcgagccacagactatgccaaagaacttcgg
aaacttgctgctgagttggaaaattatttgaaaaatattgatgccaacgggtttgtacag
aaagcaataaatgcttccaatgtgtacgaaaacattgcaaagtatgttgaagaggcaaat
gagactgcggtaattacattcaactacacagagagagctgaggatgcgatctttggtata
aacactcagattgggtttcttaaagaccgaagtgaaacccttttgattgaagccacgaaa
ttgatgcagtcagaagaagaaaccgacaatgaggctgccgtccgtgctgccaaaataaat
attaatggattgatcgctgaagtggtttctatcaagcaagaactttcagaatcctcaagt
caactgaataccattcaacgtggtaacacagcgcagcgtctggagtactcaaagaggatt
gctgaaaacacacttaacaagactgcgatggtccttcaaacagtcactcccattaatgag
acagtccaaggctgggccaggaatctggacaactctgagtacgacacatctgcatacaac
agggcagtgagcgctgcaggggaagcagtggaaaacctgacagacatggttcctgagctg
ctggataaactgcgagtggtggagcagaagaagcccatgagtaacatttcatccagcatc
ctgcgaatcaggcagctcattgcacagaccaagagtctggccagcaaggttcaagtttcc
atgcggtttgatggcctgtcagcagttgaggttcatccaaagactaaactggaggagctg
aaaaccttcacctcgatgagtttgttcatgaaggtggattcagaaaagcacaaggggcag
gacagattcatcatgtacctgggaaacaaaaatggaaggaaagattatatgggccttgct
atcaagaatgacaacctggtgtatgtttacaatctgggaggtggagatgttgagatacct
ttgagctccaagcctatcagcacctggccaccccagttcaacctcatcaaaactgaaagg
cttgggaggcatggcaaagtattcctaaccgttccaagtcctggtagcacagcagagcag
aaattcatccagaaaggggaggccccgggcactgaatcgctgtttgacctagaccctgat
aacactgtcttctttgttggtggtgttcctccagacttcaggctcccagccagcctgaac
ttgtccccctttattggctgcatcgaactggcagctctgaacaaagacgttatgagcctg
tacaacttcaagaacaagtataagatcgacaccgcagcatcgcccccctgtcccaggtac
aagctggctttcacccagagccgggcagcaaactacttctttgatggcacaggctatgct
cttgtgcgtaacattgagaagagagaaaagtttggcaagattttgacacgattcgactta
ggagtgcggagtgtgatggacgatgcgcttctcctactgatggtcaacggtagcaatttc
ttcacactggaaatgcagaagggcctcctgcgcatagtctatgactttggattcagcaat
ggccctgttgttcttgaagacaatttaaagaaaatccagattaatgatgccagataccat
gagatttcagtcatttatcataattcaaagaagattatcctggtggtggacaggggccat
gtgaagtctgtggaaaatgagaaaaagtccatgcccttctctgacatctatattggagga
gcgccctctgaaatcttgcactcccgccctgaactagcaacccttgctgggctgagaggc
tgcctcaaaggcttccagtaccaaaagaaggacttcaacttgctggaggaggctgggaca
attggaatcagctctgggtgcccagaagaatcacttatgtcccgtgaagcctattttaac
ggtgaaagttttgttgcttcaagccagaaaatctctgccttccagatgtttgaaggaggc
ttcgatttccgaacaatacagtcttctgggttgcttttctactacaccgaggggtctgat
gaaattgccatctctctggaaaatggaacagtcgtcctcaatactaagggaaccaaagtt
cggtcagaaaagaaccattataacgatggacaaactcatttcctcgttgcatcggtcact
ccacagaggtatcagctgattgtcgatgacaaagacaggcaaagcaaaagtcaccaacgt
agcacacagcaacaagcttctgcacccagcaagttctactttggagggtcacctagtggc
cagtacttgaacttcacaggatgcatcagtaatgcattcttaagcaggcctgacagagac
atggaggtggaagattttcagaggtacactgagaaggtccaggctttgctgcatggctgt
cccatggagaaacctcctgctgcattgtatgctaaacctgacagaaactcctcgaaaccc
aagagaggacgcaccagtaaggtgggcagagatagattaagcaccccagaggttcctgac
tctctaaaggataaccctgaggagctgagaggaaaggaagaggcacactgctatctgtca
gccagacccagagctacacagcatgcatatcagtttggagggacagcaaacagccggctg
gagtatggcagcattcctgcctttttcaaggaaaggtcccacttctccctcagtttgagg
actcagtccacccatggcctcatcttttacgtgtcaaatgaagaggaagacaatttcatg
gcactattccttgctaatggcagactagtttacatgttcaatgttgggaaccataagcta
aaaatcaaaagccaggagaaatataatgatggttcatggcacaatgtcgtatttacccgt
gaaaagaatgaggggcgtttaataattgatgggcttcgagtgctggaggacactgtctcg
gaggctggtgctccttggcatgttagtggcgtcttctatgtgggaggtgtgccacctggg
aaagctcataaaaacatacagatcaattccatacacagttttaccggctgtgtaaagagc
ttccagctgaatggccagtggctctcttcagtctcccatacgtttggggtcacacgatgc
ttcaatgggcccacagagtctggaacgtacttctcagctgaggggggatatgtagttctg
gatgatgcctttaacctgggcttgaagttcgagctggtgtttgaggtgcgcccccgagcc
agctcaggacttctgctgcacgtttacacctcgggtggtgaatacctgaacatgcacata
aaccacgggcaggtgattgttcaagttcacaatggaattagagaatttgccacttcagtc
actccaaaacagggtctatgtgatggcagatggcacagaattgcagttatcagggatgcc
aatgtagtgcagctggatgttgattcagaggttacccatgtggtaggaccactgaacacc
agagcaatggacagcaaggctcctgtttttattgggggtgtgccagaatctcttcttccc
cagagcatgcttatcagaacagcctacattggctgtatgagaaacctcattatcaacgag
acaccagtgagcttcagtaaagcagcactggtcagtggggctgtcagcgtcaactcctgc
ccagcagcttag
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