KEGG   Acipenser ruthenus (sterlet): 117403320
Entry
117403320         CDS       T07327                                 
Name
(RefSeq) nidogen-1-like
  KO
K06826  nidogen (entactin)
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arut00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117403320
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:arut04990]
    117403320
Domain-containing proteins not elsewhere classified [BR:arut04990]
 EGF-like domain-containing proteins
  cEGF domain-containing proteins
   117403320
SSDB
Motif
Pfam: G2F NIDO EGF_3 Ldl_recept_b cEGF Thyroglobulin_1 EGF_CA EGF FXa_inhibition SGL hEGF Plasmod_Pvs28 EGF_MSP1_1
Other DBs
NCBI-GeneID: 117403320
NCBI-ProteinID: XP_033861272
LinkDB
Position
5:complement(23997126..24046532)
AA seq 1264 aa
MALLGQSWVVWLHFFALSVSVRCLSRRELFPYGEEVGDRVLEQGDSKLERISLQQPLLFY
DGSFSSVYVTTNGILATGEPTEESDYVDKFPTSFGSIAPFLADLDTSDGVGRVYFREVSN
PETLRLAAEHINRGFPEDDEFNPNHTFIATWEDVAAHQETRRGDFLDSKKNTFQAVLASS
DTASYAIFLYPRDGLQFFVTHAKGTHNSDLELPAKAGFSKGSITYFLWGASEGQSYPITS
SNVQSVKDLYQNSNSGKQGVWVYEIGTSPYFSNIASGEVSAFPEDPDTTQEETQPWEDRS
YDDEVTEFPAPAVVEREEQQRVRYPLPENQQPETKDHYGIPKLDLEGQEPTGAKEPHRAE
PYVLVQPVQFQPHRQQYTPQQPQVVVDVEDEFDVNVFQYNPGTRETCSNSRHKCSNFADC
RDYSSGYCCHCRSGFYGNGKHCLAEGKPQRMNGKVNGRVFVGNNPTLVEFSNNDLHSYVV
ANDGRAYVAISSIPESVGPSLTALSSLGGIVGWAFALEQPGYKNGFSITGGEFQRKAEVT
FLPGNERIHITQDFKGIDEHEHLVVNTELDGRLPEIPAGSTVQIEPYTDIYQYSNTVITS
SSTREYTVTFPDGRTQTSSYQWRDTITFQDCRHDDGTRSIPTPQQLAVDNIFVLYDSSAQ
LMRYATSNKIGSISGGETTQNPCFTGTHRCDTNAACRPGQGNRFTCECAAGFRGDGRTCY
DVDECRESPTICGNNAVCNNQPGTFRCECHEGYQFADDGQTCIVINRPIDHCRSGSHNCD
IPERARCSYTGGSSYICSCLPGFIGDGHSCDDIDECQPSRCHPEAICYNTQGSFTCQCRP
GYRGDGFQCASESTKPEKTLCQRHRENILGTSSGSPPRGPRPIPGQYVPNCDDHGNYTPL
QCHGSTGQCWCVDRNGQEIPGTRSERGVRPPCIDSGIRPPPPVGPTPRPDVHPLPPGTHL
LFTQSGKIEHVPLEGYTMKKNEAKAVLHLPDKVIIAVAYDCVDKMVYWTDITSPSISKAS
LQGGDAIPVIRTDLESPEGLAVDHLGRNLYWTDSMRDRIEVAKLDGSQRRVLFDDDLVNP
RAIITDSAKGHLYWTDWNREAPKIETSYMDGTHRRILVKDDLGLPNGLTYDSYSSQLCWA
DAGTRRVECINPNQTGRRKILEGIQYPFGITSYGRNLYYTDWKRDAIIAADRTAGRENDE
FQPQKRSRLYGITTAYSQCPQGQNYCAVNNGGCTHLCLATPTGRSCRCPDNTVGVGCVER
DVKS
NT seq 3795 nt   +upstreamnt  +downstreamnt
atggctttactgggacagagctgggttgtgtggttgcatttttttgctttgtcggtgtcg
gttcgttgtctgagccgcagagagctgttcccatacggagaagaggtcggggatcgggtt
ttggagcagggagacagcaagttagaaagaattagcctccaacagccacttttgttctac
gacggttccttcagcagtgtttatgtaaccaccaatggaatccttgccacaggagaacca
actgaagagagcgactatgtagataagttccctaccagctttggatccattgctccgttt
ctggctgacctggacaccagtgacggggtcggcagagtctacttcagagaggtctccaac
ccagagactctccgcctcgcagccgaacatatcaaccggggatttcctgaagatgacgaa
ttcaacccgaatcatacttttattgctacctgggaggacgtggctgcccaccaggagacc
aggaggggagacttccttgacagcaagaaaaacacattccaagctgttctggcctccagt
gatactgcctcctatgccattttcctgtatccaagggatggcctgcagttttttgtgact
catgcgaaggggactcacaacagtgacctggagcttcctgccaaagcaggcttcagcaaa
ggaagcatcacatacttcctgtggggggcatctgaggggcagtcctacccaatcacctcc
agcaatgtgcagtcagtcaaagacctttaccagaatagcaattctggcaagcaaggagta
tgggtgtatgagatcggaacctcgccttacttcagcaatattgcgtctggagaggtaagc
gccttcccagaagatccagacaccactcaggaagaaacccagccgtgggaggaccggagt
tatgacgatgaggtcacggaatttcctgctcctgcggtagtggagagagaggagcaacag
agggtccgttatcctctccccgaaaaccaacagcctgaaaccaaagaccactatgggatt
cccaagctggatttagaaggacaagagcccactggagcaaaagaaccgcatcgtgcagaa
ccctatgttctggtgcagcctgtgcaatttcagccccacaggcagcagtacacgccacag
cagccacaggttgtagttgatgtggaagatgagtttgatgtcaatgtttttcaatacaac
ccaggtacccgggagacatgttccaacagcagacacaagtgttcgaactttgcggactgc
agagactactcctctggctactgctgtcactgccgatccggcttctatggaaatggcaag
cattgtttggcagaaggtaaacctcagcgaatgaatgggaaagtgaatgggagagtcttc
gtgggcaataaccccactctggtggagttcagtaacaatgacctgcattcgtatgtggtg
gcgaacgatgggcgcgcgtatgtggccatcagctccattccagagagtgtggggccctct
ctgacagcgctctcctcccttggtggaattgttggttgggcatttgcactggagcagcct
ggctacaagaatggatttagcatcactggcggagagttccaacgcaaggctgaggtgacg
ttcctccctgggaatgaaaggatccacatcacgcaggatttcaaaggcattgatgaacac
gagcaccttgtcgtcaacacggagctggacggacggctgcctgagattccggcagggtct
actgtccagattgagccttacacagacatttaccaatacagcaacacggtgattacctcc
tcctccacccgggagtatactgtgacctttcccgatggcagaactcagaccagctcctac
cagtggagggacaccatcactttccaggactgtcgccatgatgacggaaccaggtccatc
cccaccccacagcagcttgctgtggacaacatctttgtcctgtacgactccagcgctcaa
ttgatgcgctacgctaccagcaacaagattggatcaatcagcggtggtgaaaccactcag
aatccttgcttcactggaacacatcgatgtgacaccaacgcagcctgtcggcctggtcag
ggaaatcggttcacctgtgaatgtgctgccggtttccgtggtgatgggcgcacatgttat
gatgttgatgaatgcagagagagccctaccatctgtggcaacaacgcagtttgtaacaac
cagcctggcactttccgctgtgaatgtcatgagggctaccagtttgctgacgatgggcag
acttgcattgtgattaaccggcctattgaccactgccggagcggcagtcacaactgtgat
atacctgagcgagcacgctgtagctacacagggggctcctcctacatctgctcctgcttg
ccaggatttattggagatggtcactcctgtgatgatatagatgaatgccagcccagcaga
tgccaccctgaagccatctgctacaacactcaagggtcattcacatgccagtgcaggcca
ggttaccgtggtgatgggttccagtgtgcatcggaaagtacaaagccagagaagaccctg
tgtcagcgtcaccgagagaatatcctgggtacctcctctgggtcccccccccgggggcct
cgtcccatccccggccagtatgtcccaaattgtgacgatcacggcaactacacccccctt
cagtgtcacggcagcacgggccagtgctggtgtgtggataggaacggccaagagatccct
ggcaccaggtctgagcgtggggtcaggcctccatgcattgactcaggcatccgtcctcct
cctcctgttggacccactccaaggccagatgtgcacccgctgccccccggcactcactta
ctctttactcagagtgggaagatcgagcatgtccctctggagggctacaccatgaagaag
aacgaagccaaggctgtgctgcacctccctgacaaagtgatcattgccgtggcctatgac
tgtgtagacaagatggtgtactggacagacatcactagcccgtccatcagcaaggccagt
ctgcagggaggagatgccatcccagtcattagaacagatctggaaagtccagaaggacta
gctgtagatcacctgggccgtaacctgtactggacggactctatgcgggacaggattgaa
gtggccaagctggacggcagtcaaaggcgtgtgctgttcgacgatgacctggtgaacccc
agagctatcatcaccgattcagccaagggtcacctgtattggactgactggaacagggaa
gcccccaagattgaaacgtcttacatggacggcacacacagaaggattctggtgaaggat
gacctgggcctgcccaatggtttgacctatgattcttactcttcacaactctgttgggct
gatgcaggcactcgacgggtggagtgcatcaacccaaaccagacaggccgcagaaaaatc
cttgaaggaatccagtatccctttggaattacaagctatgggaggaatttgtactatact
gactggaagagggatgccattatagcagcagaccgcactgctgggagggagaatgatgag
ttccagcctcagaaacggtccaggctgtatgggatcaccacagcctattcacagtgtcct
caaggtcaaaactactgtgctgtaaacaatggagggtgcactcatttgtgtctagcgact
cctacaggccgatcttgtcgttgccctgacaacacagtgggagtgggatgtgtggagaga
gacgttaaatcttaa

DBGET integrated database retrieval system