Acipenser ruthenus (sterlet): 117403320
Help
Entry
117403320 CDS
T07327
Name
(RefSeq) nidogen-1-like
KO
K06826
nidogen (entactin)
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117403320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arut04990
]
117403320
Domain-containing proteins not elsewhere classified [BR:
arut04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
117403320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
cEGF
Thyroglobulin_1
EGF_CA
EGF
FXa_inhibition
SGL
hEGF
Plasmod_Pvs28
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
117403320
NCBI-ProteinID:
XP_033861272
LinkDB
All DBs
Position
5:complement(23997126..24046532)
Genome browser
AA seq
1264 aa
AA seq
DB search
MALLGQSWVVWLHFFALSVSVRCLSRRELFPYGEEVGDRVLEQGDSKLERISLQQPLLFY
DGSFSSVYVTTNGILATGEPTEESDYVDKFPTSFGSIAPFLADLDTSDGVGRVYFREVSN
PETLRLAAEHINRGFPEDDEFNPNHTFIATWEDVAAHQETRRGDFLDSKKNTFQAVLASS
DTASYAIFLYPRDGLQFFVTHAKGTHNSDLELPAKAGFSKGSITYFLWGASEGQSYPITS
SNVQSVKDLYQNSNSGKQGVWVYEIGTSPYFSNIASGEVSAFPEDPDTTQEETQPWEDRS
YDDEVTEFPAPAVVEREEQQRVRYPLPENQQPETKDHYGIPKLDLEGQEPTGAKEPHRAE
PYVLVQPVQFQPHRQQYTPQQPQVVVDVEDEFDVNVFQYNPGTRETCSNSRHKCSNFADC
RDYSSGYCCHCRSGFYGNGKHCLAEGKPQRMNGKVNGRVFVGNNPTLVEFSNNDLHSYVV
ANDGRAYVAISSIPESVGPSLTALSSLGGIVGWAFALEQPGYKNGFSITGGEFQRKAEVT
FLPGNERIHITQDFKGIDEHEHLVVNTELDGRLPEIPAGSTVQIEPYTDIYQYSNTVITS
SSTREYTVTFPDGRTQTSSYQWRDTITFQDCRHDDGTRSIPTPQQLAVDNIFVLYDSSAQ
LMRYATSNKIGSISGGETTQNPCFTGTHRCDTNAACRPGQGNRFTCECAAGFRGDGRTCY
DVDECRESPTICGNNAVCNNQPGTFRCECHEGYQFADDGQTCIVINRPIDHCRSGSHNCD
IPERARCSYTGGSSYICSCLPGFIGDGHSCDDIDECQPSRCHPEAICYNTQGSFTCQCRP
GYRGDGFQCASESTKPEKTLCQRHRENILGTSSGSPPRGPRPIPGQYVPNCDDHGNYTPL
QCHGSTGQCWCVDRNGQEIPGTRSERGVRPPCIDSGIRPPPPVGPTPRPDVHPLPPGTHL
LFTQSGKIEHVPLEGYTMKKNEAKAVLHLPDKVIIAVAYDCVDKMVYWTDITSPSISKAS
LQGGDAIPVIRTDLESPEGLAVDHLGRNLYWTDSMRDRIEVAKLDGSQRRVLFDDDLVNP
RAIITDSAKGHLYWTDWNREAPKIETSYMDGTHRRILVKDDLGLPNGLTYDSYSSQLCWA
DAGTRRVECINPNQTGRRKILEGIQYPFGITSYGRNLYYTDWKRDAIIAADRTAGRENDE
FQPQKRSRLYGITTAYSQCPQGQNYCAVNNGGCTHLCLATPTGRSCRCPDNTVGVGCVER
DVKS
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggctttactgggacagagctgggttgtgtggttgcatttttttgctttgtcggtgtcg
gttcgttgtctgagccgcagagagctgttcccatacggagaagaggtcggggatcgggtt
ttggagcagggagacagcaagttagaaagaattagcctccaacagccacttttgttctac
gacggttccttcagcagtgtttatgtaaccaccaatggaatccttgccacaggagaacca
actgaagagagcgactatgtagataagttccctaccagctttggatccattgctccgttt
ctggctgacctggacaccagtgacggggtcggcagagtctacttcagagaggtctccaac
ccagagactctccgcctcgcagccgaacatatcaaccggggatttcctgaagatgacgaa
ttcaacccgaatcatacttttattgctacctgggaggacgtggctgcccaccaggagacc
aggaggggagacttccttgacagcaagaaaaacacattccaagctgttctggcctccagt
gatactgcctcctatgccattttcctgtatccaagggatggcctgcagttttttgtgact
catgcgaaggggactcacaacagtgacctggagcttcctgccaaagcaggcttcagcaaa
ggaagcatcacatacttcctgtggggggcatctgaggggcagtcctacccaatcacctcc
agcaatgtgcagtcagtcaaagacctttaccagaatagcaattctggcaagcaaggagta
tgggtgtatgagatcggaacctcgccttacttcagcaatattgcgtctggagaggtaagc
gccttcccagaagatccagacaccactcaggaagaaacccagccgtgggaggaccggagt
tatgacgatgaggtcacggaatttcctgctcctgcggtagtggagagagaggagcaacag
agggtccgttatcctctccccgaaaaccaacagcctgaaaccaaagaccactatgggatt
cccaagctggatttagaaggacaagagcccactggagcaaaagaaccgcatcgtgcagaa
ccctatgttctggtgcagcctgtgcaatttcagccccacaggcagcagtacacgccacag
cagccacaggttgtagttgatgtggaagatgagtttgatgtcaatgtttttcaatacaac
ccaggtacccgggagacatgttccaacagcagacacaagtgttcgaactttgcggactgc
agagactactcctctggctactgctgtcactgccgatccggcttctatggaaatggcaag
cattgtttggcagaaggtaaacctcagcgaatgaatgggaaagtgaatgggagagtcttc
gtgggcaataaccccactctggtggagttcagtaacaatgacctgcattcgtatgtggtg
gcgaacgatgggcgcgcgtatgtggccatcagctccattccagagagtgtggggccctct
ctgacagcgctctcctcccttggtggaattgttggttgggcatttgcactggagcagcct
ggctacaagaatggatttagcatcactggcggagagttccaacgcaaggctgaggtgacg
ttcctccctgggaatgaaaggatccacatcacgcaggatttcaaaggcattgatgaacac
gagcaccttgtcgtcaacacggagctggacggacggctgcctgagattccggcagggtct
actgtccagattgagccttacacagacatttaccaatacagcaacacggtgattacctcc
tcctccacccgggagtatactgtgacctttcccgatggcagaactcagaccagctcctac
cagtggagggacaccatcactttccaggactgtcgccatgatgacggaaccaggtccatc
cccaccccacagcagcttgctgtggacaacatctttgtcctgtacgactccagcgctcaa
ttgatgcgctacgctaccagcaacaagattggatcaatcagcggtggtgaaaccactcag
aatccttgcttcactggaacacatcgatgtgacaccaacgcagcctgtcggcctggtcag
ggaaatcggttcacctgtgaatgtgctgccggtttccgtggtgatgggcgcacatgttat
gatgttgatgaatgcagagagagccctaccatctgtggcaacaacgcagtttgtaacaac
cagcctggcactttccgctgtgaatgtcatgagggctaccagtttgctgacgatgggcag
acttgcattgtgattaaccggcctattgaccactgccggagcggcagtcacaactgtgat
atacctgagcgagcacgctgtagctacacagggggctcctcctacatctgctcctgcttg
ccaggatttattggagatggtcactcctgtgatgatatagatgaatgccagcccagcaga
tgccaccctgaagccatctgctacaacactcaagggtcattcacatgccagtgcaggcca
ggttaccgtggtgatgggttccagtgtgcatcggaaagtacaaagccagagaagaccctg
tgtcagcgtcaccgagagaatatcctgggtacctcctctgggtcccccccccgggggcct
cgtcccatccccggccagtatgtcccaaattgtgacgatcacggcaactacacccccctt
cagtgtcacggcagcacgggccagtgctggtgtgtggataggaacggccaagagatccct
ggcaccaggtctgagcgtggggtcaggcctccatgcattgactcaggcatccgtcctcct
cctcctgttggacccactccaaggccagatgtgcacccgctgccccccggcactcactta
ctctttactcagagtgggaagatcgagcatgtccctctggagggctacaccatgaagaag
aacgaagccaaggctgtgctgcacctccctgacaaagtgatcattgccgtggcctatgac
tgtgtagacaagatggtgtactggacagacatcactagcccgtccatcagcaaggccagt
ctgcagggaggagatgccatcccagtcattagaacagatctggaaagtccagaaggacta
gctgtagatcacctgggccgtaacctgtactggacggactctatgcgggacaggattgaa
gtggccaagctggacggcagtcaaaggcgtgtgctgttcgacgatgacctggtgaacccc
agagctatcatcaccgattcagccaagggtcacctgtattggactgactggaacagggaa
gcccccaagattgaaacgtcttacatggacggcacacacagaaggattctggtgaaggat
gacctgggcctgcccaatggtttgacctatgattcttactcttcacaactctgttgggct
gatgcaggcactcgacgggtggagtgcatcaacccaaaccagacaggccgcagaaaaatc
cttgaaggaatccagtatccctttggaattacaagctatgggaggaatttgtactatact
gactggaagagggatgccattatagcagcagaccgcactgctgggagggagaatgatgag
ttccagcctcagaaacggtccaggctgtatgggatcaccacagcctattcacagtgtcct
caaggtcaaaactactgtgctgtaaacaatggagggtgcactcatttgtgtctagcgact
cctacaggccgatcttgtcgttgccctgacaacacagtgggagtgggatgtgtggagaga
gacgttaaatcttaa
DBGET
integrated database retrieval system