Acipenser ruthenus (sterlet): 117403365
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Entry
117403365 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 10-like
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117403365
03036 Chromosome and associated proteins [BR:
arut03036
]
117403365
Membrane trafficking [BR:
arut04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117403365
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117403365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
DUF6059
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
117403365
NCBI-ProteinID:
XP_033861349
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All DBs
Position
5:47637962..47734220
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AA seq
1339 aa
AA seq
DB search
MDVEEFPPPPPEVMQNNLSFAYEDEGELFEFDEIPEADRQPPAPPLPDYEIETKAKDIDS
TDDNHKDTQGHPLSNTQKTTLTNNDIFIKTEDSSFTTGSEVSEHDSPSDNLVSPAAEAAR
GSPLGKVNPYSVVDIAPLQEQSPIHKEDEVGQEDAASARVPSGYSVPVPCGYAITSNIPL
ILPAYSTPVIIRHLSVDEEVTVHEHGTHPAQNSEDRPAVKMADALARWIADPANTAWMEN
PDEVIYDDVPRENSDSTTDPDEMIYDDVELGEEGGNSSPENGWSASEFESYDEQSDTESK
SDNGIPNTFLRGKSQKHKMHMQKLMKAAKDGTKDGLEKTKAAVKRGRSFIKTKSLIQDQK
SVCLEEEPGVFIEVDCLNTEPVMMPMPEGLTQQQVVRRCILGSILESEKNYLDALKRILE
QYEKPLSEMDPKLISDRKLKMMFYRIKELLQCHSLFQIALASRVAEWDSSEMIGDVFVAS
FSKSMVLDAYSEYVNNFSTAMGLVKKACAIKPAFLEFLKHCQDSSCDRSTLYGLMMKPIQ
RFPQFILLLQDMLKNTPKGHPDRLPLQMALTELETLAEKLNERKREADQRCEIKQIAKAM
NERYLNKLLSSGSRYLICSDDMVETVYNEKGEFIKTKERRLFLLNDVLMCATVNLRSTCE
GSGIVLSGQKYLLKWSVPLSHVDVVEFGGNEELGENSRYPARHSGEKVVLHAKPCKLYMG
PGQLYQDLQNLIHDLNLVNQITQMIGNLKGNYQNLNQTVAQDWISGLQRLIFKKEEEIRA
ADQCRIQLQLPGKHDKSGNTTFFTAVFNTFTPSIKQSWISSLQMAKLALEEENQQGWFFT
EDDGNRIKKQKHPLLVGQIPVVISKLQEFKVACAVHNPEPYCGYDNVPDSLSMGHGCLWV
ASCTNQMGQISIVTLHNSNPKVTECFNVESRIVSMVHIINEDKQEVPETCPDPEPAAGKA
TDSPTICLGMEEGSISVYKSSQRSKKVRLQHFFTPDKSTVMNLTYKSECLYAGLVSGAIA
IYTKREDGSWNSDSPKILQLGVLPVKSVLAMEDTIWASSGGQLSIIGTKTHIVERQLEAH
QEEGVAVSHMAVAGVGVWIAFSSSSTLRLFHTETLEHLQDINIATPIHNMLPGQLRVSVT
SLLVCHGLLMAGTNLGIIVALPVPQLQGIPKVTGRGMVSYHAHTGPVKFLTMAAAVSSKK
QRCTSVSSAPSQPEGKDGEQRNCSPEGLSSLLNTKDKGVWLGDSTKSIAQQSTLSASSGS
LALSHVSLEHGPEDGTIYELLNDPSFSHSDKRSKKMTVSSVLVVSGGLGHRRVNKKSKQQ
RQDETVSTIMVWQIPLLNI
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagaagagttcccaccccctccacctgaagtgatgcagaataacctgtccttt
gcttatgaagacgagggggagctgtttgagtttgatgaaattcctgaagctgaccgacag
cctcctgcaccacctttacctgattatgaaattgaaacgaaggccaaagacattgactcc
actgatgataatcataaagacacacaagggcatcctctcagtaatacacagaaaacaacg
ctgactaataatgacatcttcataaaaacagaggactcaagtttcaccacagggtcagaa
gtttcagagcacgatagtccaagtgataaccttgtatctccagctgcagaagctgccagg
ggatctccgcttggaaaagtaaatccttattcggttgtagatatagctcctttgcaggag
cagagtcccatacacaaagaggatgaggtcggccaggaagatgctgctagtgccagagtt
cctagtgggtattccgttccggtgccatgtggatacgctataacgtccaacatcccgcta
atcctgcctgcttactccactcctgtcatcatacgacacctctcagtagatgaagaagtg
actgtgcatgagcatggcacccatccagcacaaaacagtgaagatcgaccggcagtaaaa
atggctgatgctttggcaagatggattgcggatcctgcaaatacagcttggatggaaaat
cctgatgaagttatttatgatgatgtgccgagagaaaactctgattctacaacagatcca
gatgaaatgatctacgatgatgtagaacttggggaagaaggtggaaacagttccccggag
aatgggtggagcgccagtgaatttgaaagctacgatgaacaaagtgatacagagagcaaa
agcgacaatgggattccaaatactttcctccgaggcaaatctcaaaaacacaaaatgcat
atgcaaaagttaatgaaagcagcaaaagatggaaccaaagatgggcttgaaaaaaccaaa
gctgctgtgaagagagggcgttcatttataaaaacaaagtctcttattcaagatcaaaag
tcagtctgtcttgaagaggaaccaggtgtttttattgaagttgattgtctcaatactgaa
ccagtgatgatgcctatgccagaaggattgacacagcagcaggttgttcgaagatgtatt
cttgggtcaatactagagagtgaaaaaaactacttggatgcattaaaacgcattttagag
caatatgaaaagccactgtcagaaatggatccaaagttgataagtgatcgaaaattaaaa
atgatgttttaccgaatcaaggagctccttcagtgccattctctgttccagattgcacta
gctagtcgtgttgctgagtgggacagctcggaaatgataggagatgtgtttgttgcttca
ttttccaaatccatggtgctggatgcatatagtgagtatgtgaataatttcagcacagcc
atggggcttgtcaagaaagcatgtgcaataaagcctgcttttcttgaatttttgaagcac
tgccaagattccagctgcgatcgcagtacgctgtacgggttaatgatgaaacctatccag
cggttcccacagtttatcctgcttcttcaggacatgttgaaaaacactcctaaaggacac
cctgacagacttcctctgcagatggctctgacggaacttgaaacattagcagagaaacta
aacgagaggaagagggaggcagaccagcgctgtgaaattaaacaaatcgcaaaagccatg
aatgagcgctatcttaacaagctcctaagtagtgggagtagatacctgatatgttctgac
gacatggtggaaactgtttacaatgagaagggagaatttattaaaaccaaagaacgccgg
ctgttcttgctaaatgatgtgttgatgtgtgccaccgttaacctcagatctacctgtgaa
ggcagtggtattgtcctatctggtcagaagtacttgctgaagtggagtgtaccactgagc
cacgtggatgtggtggagtttggaggcaatgaagagctgggagaaaactccagataccct
gctcggcattctggagaaaaagtggtgcttcatgcaaaaccatgcaaattgtatatgggt
ccagggcagctgtaccaggatttgcagaatttaatccatgatctgaatcttgttaatcag
ataacacaaatgattggaaatttgaaaggcaactaccagaaccttaatcagacagtggcc
caggactggatttctggactacaaaggctgatatttaaaaaggaggaagaaataagagca
gcggatcaatgtagaattcaactccaactccctggaaagcatgataagtcaggaaacact
acattttttacagcagtgtttaatacgtttactccctccatcaaacaatcctggataagc
agtttgcagatggcaaaactggctctcgaggaggaaaaccagcagggatggttttttaca
gaggacgacgggaatcggataaaaaaacagaaacatccacttcttgttgggcagattcca
gttgttatatccaagttacaggagtttaaggtggcatgtgctgttcataaccctgagcct
tactgtggctatgataatgtaccagactctctctccatgggacatggatgtctatgggtt
gctagttgcaccaatcagatgggacagatatccattgtgacgctccataattcaaacccc
aaagttactgaatgttttaatgtggagtctcggattgtgtccatggtgcacatcataaat
gaagacaagcaggaggtgccagaaacatgtcccgaccctgaacctgcagcaggaaaagca
acagattcccccaccatatgcctgggcatggaggaagggagcatatcagtttataaaagt
agtcaacgttccaagaaagtgcgtcttcaacatttcttcacaccagacaaatcaacggtt
atgaatctcacgtataagtctgagtgcctgtatgctggcctagtgagtggagccattgca
atctacaccaaaagagaagatgggtcctggaactcagattcccctaagattctgcagctg
ggggttctccctgtaaaaagtgttctggcaatggaagacacaatctgggcatcttcaggt
ggacagctctctattatcggcaccaagacgcatattgtggagcgtcagctcgaagcccat
caggaggaaggggtggctgtatcccacatggctgttgctggtgttggagtctggattgcc
ttcagctccagttctacactacgactgttccacacagaaactctggaacacctccaagac
atcaacattgcaactcccatccacaacatgctgccgggtcagctgagggtttcagtgacc
agtctcctggtgtgtcatggcttgctgatggctggcactaacttgggaattattgttgct
ttgcctgtccctcagttacaaggcatacccaaagtaacagggaggggaatggtctcgtac
catgctcataccggtcctgtgaaattccttacaatggctgcagccgtgagcagcaagaaa
cagagatgcacatcggtaagcagtgctccatcccagccggaaggtaaagatggagaacag
agaaactgttcccccgagggattgtcctctttgttgaacactaaagacaaaggggtttgg
ctgggagactcgaccaagtccattgctcaacaaagcaccctgtcggcttcttcagggtct
ctggcactgtctcacgtgtcactcgaacacgggccagaggacggtaccatttatgagctc
ctgaatgacccaagcttttcacacagtgacaaaagatccaaaaagatgactgttagttct
gtgcttgtggtttctgggggcttaggccacagaagagtgaataagaaatcaaagcaacag
cggcaggatgagactgtgtcaacaatcatggtttggcaaattccattgcttaatatataa
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