Acipenser ruthenus (sterlet): 117403376
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Entry
117403376 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117403376
Transcription factors [BR:
arut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117403376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
117403376
NCBI-ProteinID:
XP_033861380
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Position
5:complement(1565152..1568675)
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AA seq
287 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQXGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSSSHHPLTSSMNGNKSILGSSDDEKTPSGTPDHTSSSPALLLTSNS
GLQPLHGLAPPQGPSAIPVSSADAMHHHHLHDVILNPMSSNLVDLGS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcttccaacttttggttttactcaagagcaagttgcgtgtgtctgcgaagtg
ctccaancagggggtaacatagagcgccttggccgctttctgtggtccctaccagcctgc
gaacaccttcacaagaacgaaagcgtcctgaaagccaaggccgtcgtggctttccaccgg
ggcaatttcagagagctgtacaagattctggagagccaccagttctcgccacacaaccac
cccaaactacagcagctctggctcaaagcgcactacgtcgaggctgaaaagctccggggc
cgccctctaggggcagtggggaagtaccgtgtccgcagaaagttcccgctgccccggtcc
atctgggacggcgaggagaccagctactgctttaaagagaagagccggggcgttctgagg
gagtggtacacccacaacccgtacccgtctccgcgggagaaaagggagctagctgaagcc
accggcctcaccacaacccaagtcagcaactggttcaaaaatagaagacagagggaccga
gcagcagaagccaaagaaagagaaaacaacgagaattcaaactccagcagccaccatcca
ttgacttcttccatgaatggaaataaatcaattttggggagctctgacgacgagaaaact
ccatcggggaccccggatcacacgtcgtcgagccctgctttactgctgacttcgaactct
ggactccagcctctgcacgggctggccccgccgcagggtcccagcgcgatccccgtttcc
agcgcagacgctatgcatcatcaccatttacacgatgtcatcctgaaccccatgtcgtcc
aacttggtcgaccttggctcttaa
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