Acipenser ruthenus (sterlet): 117403816
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Entry
117403816 CDS
T07327
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
arut00535
]
117403816
04091 Lectins [BR:
arut04091
]
117403816
Proteoglycans [BR:
arut00535
]
Cell surface proteoglycans
Others
117403816
Lectins [BR:
arut04091
]
C-Type lectins
Others
117403816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
DUF3377
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
117403816
NCBI-ProteinID:
XP_034757983
LinkDB
All DBs
Position
2:complement(12025137..12058214)
Genome browser
AA seq
2393 aa
AA seq
DB search
MNFFKTCPTRLVPWQGLLVVCALIRLAFGASFYGDGYMELKTVESWSRSSLYVRFRTSRP
SGMLFLAAGHTDYCLVELHSTRLQVKLDLGSGERILRSEKGTPLNDLAWHTAELQHDNNS
VTLTVDKHFQASVRMPGLLHDLSIQEGLYVGGTGGLDKPYLVTEPSGFRGCIDELLFNQH
NLLSSLRSYYGFKHVYEVSLGCSPQFFASEDDPVSFFSSKAYISFPLWNVREGGVFECMV
HTSAEQGLLLYNSARQGDFVAMEIREGLIIAVVGKGGSKNELSSLSQVNDRKWHYIKLQF
TSRNLQLTVDEETVKKILSSPSKALSLRGPLFIGGIDDSTRAEVRNQGLVSVSGKRARGG
SFKGCLKDIKANSEKMGLKNAVVTKDISVGCEPEKEPEPTMQATPTTVPLPQIPSTSAAI
PTSAKPQEKKHGSFLALNNLVVPEGGRASLGSKHIKVSLEFKKLGIRQSQIVFKIQEQPV
HGQLRLDIDQDEEENTFSMLDLWHGRVMYVHGGSEDPLDFFMFSVFASSKKEVPPYLKGN
KQYRFNISVTPTNDAPELTLLEGNLFVLLENSKKPLTTDVLKATDVDSNSTELVFSVLGN
LNADAGYLENTKNPGKVLNTFSHTDLEEGRIQYVHSGVRNSRIVLRVSDGDKVSNTVVLR
IMAIPLDYNIANNTGVEVTQGEVALIGTNHLAVQTNAVKQELDLRYDIIEPPKYGEVQRW
HSSGEWKPTNTFSQRTLERERVRYVSTYQELQSSNATDNFKCKVSIGSLASEELFFPVTV
KWVQYKLLKNSALEIDKVRRVALNSEHLHAIVEGVTVAENNLYYRLLTLPKKGKLLLNNK
VLKKNSTFSQRNVTEQKVEYELVERPREDSKDMFTFQVLSKHAHSGAYDFKLAIKADVNS
IILTNTGLSLIEGESKLISKEELFSETLITKEMFYKITSSPKHGKLKRINLSDSASSNDN
MTVFTNADILGERILYVHDDSETTHDEFTFIASLNKSGAGAAAVESSFNISIELKNDEKP
VRVVDKIFHVARNGQKLLTVEDLCYHDGDSDFDNGQLLYTRRGIPNGDLVLVNDTSHKLY
QFHQEDLELRRVLFLHRGTDYGRFVLFVTDGKHYTSSLLEVSAHEPYIQIANSTGLLVQK
GHAASFNAANFSVATNMDVRDDKEVTYKLFLPPKHGRLHINDLLVDSFTQHDLRRGHLVY
QHDNSNNLVDRFNFTVKVKDVRLDAGVFVRVYLESHQRPPKVVHNRTLLVEEGKPVKISK
RKLEVVHEDSLPVEIVYTVKIAPTYGYIRSFAEGEGRYLGSEQAPIQSFTQQDINDGNIQ
YVHVTADQHKDSIELQVSNGVTEVGGLQVCIDVIPRLIPLKVSNITLKEGAAKALTEDII
QVTSQHFAGLDLEYSVWEPPQHGQIEHSRSPGVKLLVFTRKQVQQEFIYYVHDDSETTSD
NFTIIANDTELRKQSQPCTVYVNVMPVNDEAPVITANTILKVWVSSVTEITKADLNSEDK
DSPPEELDYVITPPSNGHLALKSSANKSILNFTQAHVNNGEVVFVHSGAMSGGFSFQVSD
GLNFAPRQIFSVTARALLLRLDTNQHLQVFPGSLTPISSEDLQAVTNDDDDGAGNRTITF
TLVSSPTLGRLVRVKPDNSTVEISTFTQAMVDEGAIAYEQTNLESIGWSAEDSFRFTVSS
PPASLDPQVFNIAISYENTGPERRSLLLANTGAVVTEGEKVLIDKSKLDASNLLVKLPEA
QRHSYEVWYEVNSLPQHGVITVGERNLTKEKPNFSQFILNKYGITYQHDNSESLQDSFAF
SVWLNMKSKTASRPLDGSEVIEEVFNVTVTPVNDQPPELKTKAPGLRVVQGNKELLVPEH
LNVVDLDNPPEDIKYTIISKPNNGFLAMGSSINESIMTFTQADINRGRVWFIQDGSTFSG
VFYFSVTDGKHRPLYKLFNLEVTEITISLSNNTDLVLEQGQTAVVVTNEQLAAETNGKNT
TIHYLVTTPPQFGKLLIATEPVTQFEQEDLLQGRLSYQMTNLTSSRDSFEFTVFTSESNL
TEQVLNITVKPLITLSQDTRVPNEIAFKLKSSMLNATQLSVLSGSDPHFEIVVPPTHSKL
LTSKKLNHGTSEPVLSFTFKDLEMGIVSLESAANMTAIQELNDSFTFVLHADSAQPAIGV
FLYVIVPYDPSLVPVVTTKSPPLTTAAVITNQTALGEPQLPFPVEPTVVTKESTKPVTRW
KGKNRWGNPNRVAVPEPAVPDLASEKREKTPKTPVVEAAAHPSRASNPLLIILPLLACLL
LIVILVVLIVVFRHRKEKQKPLIQNHPNNTTAPSSPSPCQPERSLAVPSVTVTPLLKGRE
VGAGMGPRGNALETSSSPQETSLQLCTWNNLDPETLLHCRTSHPTLRNNQYWV
NT seq
7182 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctttaaaacctgtccgacgaggttagtgccctggcaaggactgctggtcgtg
tgtgcactgatcaggcttgcatttggagcctctttctacggtgacggctacatggagctg
aaaacggtggagtcatggtcccgctcgtccctgtatgtgaggttccgcacctccagaccc
agcggcatgctcttcctggcagcagggcacacagactactgcctagtggagctgcactcc
actcgcttacaggtgaagttggacttgggatctggggagcgcatacttcgctcagagaaa
ggcaccccactgaatgatctcgcctggcacacagctgaactgcagcatgacaataacagc
gtgactctgactgtggacaagcactttcaagcgagtgtcagaatgccagggctgctgcat
gatctcagcatccaggagggcctgtatgtgggaggcactggaggtctggacaaaccgtac
ctcgtcacggagcccagcggctttcgagggtgcattgatgagctcctgtttaaccagcat
aatctgctgtcctcactcaggtcctattacgggttcaaacatgtatatgaggtgtccttg
ggctgcagccctcagttctttgccagtgaagacgacccggtcagtttcttcagctccaaa
gcttatatttctttcccactttggaatgtgcgagagggaggagtatttgagtgcatggtc
cacacatcagctgagcaaggacttcttctgtacaactctgctcgtcagggagactttgta
gccatggagatccgagaagggctgatcattgcggttgtgggaaagggtgggagtaaaaat
gagctttcctcccttagtcaagttaatgataggaaatggcattacataaaactacagttt
acatcgaggaaccttcagcttacagtggatgaggagactgtgaaaaaaatcctgagttcc
cccagcaaggctctcagtctgaggggtcccctctttatagggggtatagatgatagcact
cgagcagaagtccggaatcagggcttggtctcggtctcaggaaagcgtgccagaggtggg
tcctttaaaggctgcttgaaagacatcaaagccaactctgagaaaatgggcctaaagaat
gctgtggttactaaagacatttccgtggggtgtgaaccagaaaaggaaccagagcctaca
atgcaagccacccccactactgtccccctgcctcaaatcccatccacatctgctgccatt
ccaacaagcgccaagcctcaggaaaagaagcatggcagcttcctggccctcaataacctt
gtggttccagaagggggccgtgcatctctcgggtccaagcacattaaagtcagcctggaa
ttcaagaagctgggtattcgtcagtcacagatcgtttttaagatccaagagcagcctgtc
cacgggcagctgaggttggatatagatcaggacgaagaagaaaacactttctccatgttg
gacctctggcatggtagggttatgtacgttcatggtggttcagaggatccccttgacttt
tttatgttttctgtctttgccagtagcaagaaagaagtcccaccctatctaaagggaaat
aagcaatacagatttaacattagcgtaacccccaccaatgatgccccagaactgactctc
cttgaaggaaacctctttgtattgttggagaactcaaagaagcctctaacaactgatgtg
ttgaaagccactgacgtcgacagcaattctacagagctggtgttttcagtgctgggtaac
ctgaatgcagatgctggctatcttgaaaacactaagaaccctggtaaagttctaaatact
ttctcgcacactgacttggaggaaggaagaatacagtatgttcatagtggagtgagaaac
tccaggattgtgttaagagtcagtgatggggataaagtgagcaacaccgtggtcctgcga
ataatggctataccactggattataacattgcaaacaacacaggcgtggaagtgacgcag
ggagaagtggccttgattggtaccaaccacctggcagtacagactaatgcggtcaaacag
gagctagatctccggtacgatatcattgagccccccaagtatggggaagtacagaggtgg
cactccagcggagagtggaaacccaccaacacattctcccagcgcacactcgaacgtgaa
cgtgtgcgatacgtgagcacttaccaggaacttcagtccagcaatgctactgacaatttc
aaatgcaaagtcagtatcggaagcttggccagcgaggaactgttctttccagttacagtg
aaatgggttcagtataaactactgaaaaacagtgcactagaaattgacaaagtaaggaga
gtggcactaaattcagaacacctccatgccattgttgaaggcgtgacagtagcggaaaac
aatctgtattaccggcttttgacattacccaagaaaggcaagcttctgctgaacaacaaa
gtgttgaagaaaaactcaacttttagccaaagaaatgtcactgagcagaaagtagaatat
gagctggttgaaagaccacgtgaagactcaaaggacatgtttaccttccaggttctctcc
aaacacgcacattcaggggcctatgatttcaaacttgccatcaaggcagatgtcaacagt
atcatcctaaccaatactgggctttctttaatcgagggagaaagtaaactgatatcaaaa
gaggaattgttttcagaaaccctgatcacaaaagaaatgttctacaaaatcacaagcagc
cccaaacatgggaagttaaagcgtataaacctttctgactctgcctccagcaatgacaac
atgacggtgttcaccaacgcagatatccttggggaacgcattctgtacgtccacgatgac
tctgaaaccacccatgatgagtttactttcattgcatccctcaacaagtctggggcgggg
gctgcagctgtggagagctcctttaacatttccattgagctcaagaatgacgagaagcca
gtgcgtgttgttgataagatcttccatgtggccagaaatggtcagaaactgttaactgtg
gaagatctctgctatcacgatggggactctgattttgacaatggccagctgttgtacact
cgacgcggaataccgaacggggacctggtccttgtgaatgacacctctcacaagctctac
cagttccatcaggaagacctggagctgaggcgtgtcttattcttgcaccgtgggacagat
tacgggcgtttcgtgttgtttgtgactgatgggaagcattatacatcgtcactgctggag
gtcagtgcacacgaaccctacatccagatagccaacagtacagggctgctggtacaaaaa
ggacatgcagcgtctttcaacgcagccaacttcagtgtggccaccaacatggatgtaaga
gatgataaggaggtcacctacaaattgtttctcccaccaaagcatggcagactgcatata
aatgatcttctagtggattctttcacgcagcacgatttgagaaggggtcacctggtctat
caacatgacaacagtaacaacttggtggacagattcaactttaccgtgaaggttaaggat
gtccgtctggatgctggagtttttgtccgagtgtatttggagagtcaccagcgcccccca
aaggttgtgcacaacagaactcttctggtagaagaggggaagcctgtgaagatcagtaaa
agaaaacttgaggttgtgcatgaagatagcttacctgtggaaatcgtttacactgttaag
atcgctcctacctacggatacatccgcagctttgctgaaggggaggggcgatacctggga
agtgaacaagcccctatccagagcttcacacagcaagacattaatgatggcaacatccag
tatgtgcatgtcactgccgatcagcacaaggacagcatcgagctgcaggtctccaatgga
gtgactgaggttgggggactccaggtctgcattgatgttatacctcgtctaatcccactg
aaagtgtccaacatcacgctgaaggaaggagcggccaaggcgctgacagaggacatcatt
caagttactagccaacactttgctggcctggacttggagtactctgtgtgggagcctccg
cagcatgggcagatagagcactcccgatcccccggcgtgaagctccttgtgttcaccaga
aagcaggttcagcaggagttcatttattatgtgcatgatgacagtgagacgacgtctgat
aattttaccatcattgccaacgacactgagcttcggaagcagagccagccctgcactgtc
tatgtaaacgttatgccagtgaatgacgaggcaccggttataactgccaacacaatatta
aaggtgtgggtgagctcagttactgagataacaaaagcagacctgaactctgaagacaag
gactctcccccagaagagctggactatgtcattaccccccccagcaacggccaccttgct
ctaaagagctctgcaaacaagagtatcctgaacttcacacaggcacacgttaacaacggg
gaggtagtgtttgtacacagcggagccatgtctggtggatttagtttccaggtgagcgat
ggtttgaactttgcccctcggcagatcttcagtgtcacagccagagctctgctcctccgc
ttggacacaaaccagcatcttcaggtctttccagggtctctaactcccatttcatcagaa
gatttgcaggctgttacgaatgatgatgatgatggagcaggaaaccgcaccataaccttc
actctggtcagctctcccacactgggaaggctggtcagagtcaagcctgacaactccact
gtggaaatctccactttcacgcaagccatggtggatgagggtgcgattgcttatgaacag
actaacctggagtctataggatggagtgcagaggactcctttagatttactgtgtcctct
ccgcctgcctctctggatcctcaagtatttaacatcgccatctcttatgaaaacactggt
cctgaacggcggagtcttctgcttgcaaacacaggtgccgtggttacagagggtgagaaa
gtgctgattgataaatccaagctggatgcttccaacctcctggtgaagctgcctgaagca
cagcgccactcttatgaagtctggtatgaagtcaactctttaccccagcatggtgtgatc
actgtcggagaacgcaatcttaccaaagagaagcccaacttctcccagttcattctcaac
aagtatggaatcacctaccagcacgacaactctgagtctttgcaggacagctttgccttc
agtgtgtggttaaacatgaagagcaagactgcctcgagacccctggatggaagtgaagtg
attgaagaggtcttcaatgttactgtcacaccagtcaacgaccagcctccagagctgaag
acaaaggctccaggcctacgggtggttcagggcaacaaagagttgctcgttccagagcat
ttgaacgttgtggacttggataatcctccagaagatatcaaatacaccataatcagtaaa
cccaacaatggctttctagcgatgggtagcagcattaacgaatccatcatgaccttcact
caggctgacatcaaccgtggcagagtgtggttcatccaggatggaagcacgttctcagga
gtcttctacttcagtgtcacggacggcaagcacaggccgctgtacaaactgttcaatttg
gaggtgacagagattaccatttccctttctaacaatactgacctggtgttggagcagggc
caaactgctgtggtcgtcaccaatgagcaattagcagcagagaccaatggtaaaaacaca
acaatccactatctggttacaacccctccccagtttggaaagcttctcatcgctactgaa
ccagtcacacagtttgagcaagaagaccttttacaaggaagactatcctatcaaatgact
aatctaacatcctcccgggatagttttgaattcactgtctttacttctgagagtaatctg
actgaacaggtccttaatattacagttaaacctttgataaccttaagccaagacacaagg
gtcccaaatgaaattgcatttaaattgaagagcagcatgctgaatgccacacagttatcc
gtcctgagtggtagcgatccacactttgaaatagtagtccctccaacacacagcaaactt
ttaacatccaaaaaacttaatcatggaacgtcagagcctgtcctatctttcactttcaaa
gatcttgagatggggattgtgtcacttgagtctgcagccaacatgacagcaatccaggaa
ctgaatgattcgttcacctttgttcttcatgcagatagcgctcaacctgcgatcggtgtt
tttctgtatgttattgtgccgtatgatccatcattggtgccagttgtcacaaccaaaagc
cctccattgactactgcagcagttataactaaccagactgccttaggtgaaccccaattg
ccatttccagtggagcccactgtggttactaaggaatcgaccaagcctgttaccagatgg
aaaggtaagaaccgctggggaaaccccaatagagttgctgtccctgagccagcggtgcca
gatctagcctcagagaagcgggagaaaacgcccaagacccctgttgtggaagctgcagct
catcccagcagggcctccaaccccctgctcatcatactgcccctgctggcttgcctcctc
ctcattgttattctggtggtgttgattgtagtgttccgacacagaaaggagaagcaaaag
cccctaattcagaaccaccccaacaacaccactgccccgagcagcccgagcccgtgtcag
cctgagaggagcctggccgtcccgtccgtcactgttacaccactgctgaaaggaagggag
gttggcgcaggcatggggcccagaggaaatgcattggagaccagtagcagcccacaagag
acctccctgcagctctgtacctggaacaacctggacccagagacactgctgcactgccgg
acctcgcacccaaccctgcgcaacaaccagtactgggtgtag
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integrated database retrieval system
