Acipenser ruthenus (sterlet): 117403891
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Entry
117403891 CDS
T07327
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04145
Phagosome
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117403891
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117403891
09144 Cellular community - eukaryotes
04510 Focal adhesion
117403891
09142 Cell motility
04820 Cytoskeleton in muscle cells
117403891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117403891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117403891
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117403891
Membrane trafficking [BR:
arut04131
]
Endocytosis
Phagocytosis
Opsonins
117403891
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117403891
Exosomal proteins of colorectal cancer cells
117403891
Exosomal proteins of bladder cancer cells
117403891
Glycosaminoglycan binding proteins [BR:
arut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117403891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
117403891
NCBI-ProteinID:
XP_034762368
LinkDB
All DBs
Position
1:complement(113444476..113466260)
Genome browser
AA seq
948 aa
AA seq
DB search
MTLWKGVLFIVQVVLQLRYSLSVKGEYQVYNLLSTPGYITEIVQQELTAPSVNEVYILST
FKLQPKSGTSIFGLYSPKDNTKYFEFFVLGKLNRAILRYLKSDGKLNVVTFNNIQLADGK
RHTVLFRMSGLQQGSSTVELYVDCSQIDTVRDLPKAFTGLPQGPNSLELRTLQKRPLDTL
EELKLVIGGSLTKVAAIQECLLQQSDSAQNIGDAGRQLITQMTQLTEVIGELKEIMRQQV
KETAFLRNTISECQACGLGGISPGVPDVVSKPRCTPGSCFRDDLCSETEAGFECGPCPDG
YTGDGFHCDDVDECRFNPCFPGVRCVNTAPGFRCDACPLGYTGPIVKGLGITYAKTTKQV
CVDIDECNNGKNGGCAPNSICTNTKGSFRCGGCKAGYIGDQAKGCRPERSCGNGRLNTCH
IHAQCVVERDGDISCMCGIGWAGNGYQCGKDTDIDGYPDEELKCKDIFCRKDNCMYVPNS
GQEDADQDGYGNACDEDADGDGIPNEQDNCVLNPNIDQRNSDLDNFGDACDNCRTAVNPD
QRDTDNDGKGDACDDDMDGDGIKNFLDNCQRVPNLDQKDRDNDGVGDSCDSCIDVSNPNQ
SDIDNDLVGDSCDTNQDSDGDGHQDSKDNCPNVINSSQLDTDKDGMGDECDDDDDNDGIP
DLLPPGPDNCRLVPNIDQTDDNGDGVGDICESDFDQDTVIDRIDICPENAEVTLTDFRAY
QTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAIGYTAFNGVDFEGTFHVNTLTDD
DYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLRNSL
WHTGDTSDQVRLLWKDSRNVGWKDKVSYRWFLQHRPQVGYIRARFYEGSELVADSGVTID
TTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFRAQHFGGDAL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgactctgtggaagggggtattattcattgtgcaggttgttttacagttgcgctacagt
ttgtccgtaaaaggagaataccaagtttacaacctgctttccacacctggatacataaca
gagatcgtgcagcaggagctcacggctccctccgtaaatgaagtctacattctctcaacc
tttaagctgcagcccaagtctggcacctctatcttcggcctctactctccaaaggataac
accaagtattttgagttttttgtgcttgggaaactcaacagagcaattctacgatatttg
aagagcgatggcaagctaaacgtggtcacgttcaacaacatccagctggctgatggaaag
agacacactgtgctgtttaggatgagtgggttacagcagggatccagcacagtggagctg
tacgtcgactgcagccagatagacacagtgagggacttaccaaaagcattcactggactg
ccacaaggacccaactcgcttgagctgcggacactccagaaaagaccactggacactctg
gaggagcttaaactagtgatcgggggttcccttacaaaagtagctgcaatccaagaatgc
ctgctccagcaaagcgattctgcacagaatataggtgacgctgggagacagctgattacc
cagatgactcagctgacagaggttattggagagctgaaagaaataatgaggcaacaggtg
aaagaaacagctttcctgaggaacaccatatccgaatgccaggcctgtgggttgggtgga
attagtcctggagtcccagacgttgtctctaaacccaggtgcactccgggctcttgtttc
cgtgacgacctgtgtagcgagacagaggctgggttcgagtgtggaccgtgccctgacgga
tacacaggcgacgggtttcattgcgatgatgttgatgagtgccgatttaatccatgtttc
cctggggtccgttgtgttaacactgcgccaggatttaggtgtgatgcatgtcctctcggg
tatactggtcctattgtcaagggattagggatcacctatgccaaaactactaaacaggtc
tgtgttgatattgatgaatgtaacaatggcaaaaatggaggctgtgcaccgaactccatc
tgtacaaacactaagggctcattccgctgtggaggttgtaaggctgggtacatcggagac
caagccaagggctgcaggccagaaagaagctgtggtaacggacggctgaacacctgccac
atccacgcgcagtgcgtcgtggagagggacggggacatcagctgcatgtgtggcattggc
tgggctggcaatggctatcagtgtggaaaggatacagatattgacggctatcctgacgaa
gagctcaagtgtaaagatatattctgcagaaaggataactgcatgtatgttccaaactcc
ggacaagaagatgcagaccaggacggatacgggaatgcttgtgatgaggatgcagatggc
gacggcattcccaacgagcaggataactgtgttctgaaccccaacatcgaccagagaaac
agcgatctggataactttggggacgcctgtgataactgccgcactgcagtgaaccctgac
cagagggacactgacaatgacggcaagggagacgcctgtgatgatgacatggatggggac
ggcatcaagaatttcctggacaactgccagcgtgtccccaaccttgaccagaaggacaga
gacaatgatggagtgggggactcctgtgacagctgtattgacgtcagcaacccaaaccag
tcagatattgataacgatctcgtgggagactcctgtgatacaaaccaagacagtgatgga
gatgggcaccaggacagcaaggacaattgccccaacgtgattaacagctcccagctcgac
acagacaaggacgggatgggagatgagtgtgacgatgatgatgacaatgatggcattcct
gatctccttccaccgggaccagacaactgtagactggtgcccaacatagaccagactgat
gacaacggggatggagtaggtgatatctgtgaaagcgactttgaccaggacacagtgatt
gacaggatcgatatctgtcccgagaacgctgaggtcaccctgacagatttcagagcctac
cagactgtcgtcctcgaccccgagggagacgctcagattgatcccaactgggtggttctc
aaccagggtatggagattgtgcagaccatgaatagtgatcctggactggcaattggttac
actgccttcaatggagtggactttgagggcactttccacgtgaacactctgactgatgat
gactacgctggcttcatcttcggctaccaggacagctccagcttctacgtggtcatgtgg
aagcagacagaacaaacctattggcaagccacgccgtttagagctgtggctgaacccggc
attcagctcaaggctgtcaagtcaaagactggcccaggggaacatctccgaaactccctg
tggcacacaggggacaccagcgaccaggtcaggctgctgtggaaggactccaggaatgtg
ggctggaaggacaaggtctcctaccgctggttcctgcagcataggccccaggtgggctac
atcagggcacgcttttacgaaggctctgaactagtggctgattctggagtgactatcgac
accaccatgcgtgggggaaggcttggcgtgttttgcttctcccaggagaacatcatttgg
tccaacctgaagtatcgctgcaatgatacaatccctgaggactttcaggagttcagagcc
cagcactttggaggtgacgctctttaa
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