Acipenser ruthenus (sterlet): 117403953
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Entry
117403953 CDS
T07327
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117403953
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117403953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
DUF4484
Motif
Other DBs
NCBI-GeneID:
117403953
NCBI-ProteinID:
XP_034757787
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All DBs
Position
2:10862674..10882518
Genome browser
AA seq
1092 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATSNYFGFTHGGAAQYSQQPAAGVAYSHPTTVASYTV
HPSPVAAHTVTAAYAPAAATVAVARPAVAATAAAYGGYQPAHTAADYGYAQRQQEMPPPP
PPATSQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAVAAAAAQPQPTVSDSYYQTGTL
NTAWDSSWKKSLQAPKTGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSAVQ
QVAAAAVPSYSQSPTYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQQQQKQVAAA
VAASAAWTGSTFTKKTPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHK
KKEAALKASQSSSSSTSTTSGSSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVK
LHTKLGKPIPSTEPSMVTQTSTSAASSKPAGPATASGTISTTSAASSSTSSYLKPVNIVS
SGVPNKTTASAAAASTVSASTVKKIAAPKINFVGGNRLQTTGAKMEEIKNDGAKSVQPVM
HATQTQEMKVDVAPEPVSTQATLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSF
NDPNAKEMHLKGRRHRLQYKKKVNPELQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREE
EERWRMEMSVGYRRYEEDMYWRRMEEEQHHWDERRRMPDGGYPQGPPAPPGLLGVRPGMP
IPQPQGPVPPRRPDSSDDRYVMTKHAAIYPVEEELQAIQKIVSITERALKLVSDIITDQD
NKTKEDEKNDAQRDRYTGAKALKGVMRVGVLAKGLLLKGDKNVNLVLLCSEKPNSNLLTR
IVENLPKQLALVTPEKYEVKGSNEEAAIILTSCVEPRMQVIITLTSPIIREENARDGDVP
SGMVKDPADVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWAAFP
SWAMELLVEKAISSAAGPLSPGDALRRVFECISSGILLPGGPGLVDPCEKNPTDTLTSVS
EQQREDITSSAQFALRLLAFRQIHKVLGMDPLPQMNPRFSVRNTRKRRRDNSDGVDGFEG
EGKKDKKDYDNY
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgatacccatatgcccagttgtctccttcacctatgtgcccagccggctaggtgaagat
gccaaaatggctaccagcaactactttggctttacccatggtggtgctgcgcagtacagc
cagcagccagcagctggggtagcctattcccacccaacaacagtggccagctatactgtg
catccgtcgccggttgccgcacacactgtgacggcagcctacgccccggctgctgccact
gttgctgtggccagacctgccgtggctgccactgctgcagcttacggagggtaccagcca
gcacacactgctgcggactatggctacgcacagagacagcaggaaatgccaccaccacca
cctccggccacatcgcagaattaccaggattcctattcctatgtgaggtccacagctccg
gctgtagcctatgacagtaagcagtactaccagcagcctactgccacggcggctgtggct
gcggcagctgctcaaccacagcctactgtatcagattcctactatcagacaggtacgctt
aacacagcctgggattcgtcatggaagaaaagtctccaagcacctaaaacaggatacagc
caaggtgcaacacagtacacccaagcccagcaaactcgacaagtgacagcaataaaacca
gccactcctagtcctgcaaccaccaccttctcaatataccctgtatcttcagctgtgcag
caagtggccgctgcagcagtgccctcctactcccagagccccacctacagcacaacagct
gttacttactctggcacatcttattccgggtatgaagctgcagtatactcggctgcatcc
tcttactaccaacagcagcagcaacagcagcagcagcaacaaaaacaagtggcagcggct
gtagcagcttcagcagcctggacaggaagcacattcaccaagaagactccgttccagaac
aagcagctcaaaccaaaacaacccccgaaaccaccccagatacattactgtgacgtctgc
aagatcagctgtgcagggcctcagacttataaagaacatctagaggggcagaagcacaag
aaaaaagaagcagctttgaaagcgtcccagagcagcagcagcagcaccagcaccaccagt
ggcagctctgcccgtggaacccagaaccagctgcgctgtgagctctgcgatgtctcctgc
actggggccgatgcgtacgcagctcacatccggggagcaaaacaccagaaggtggttaaa
ttacacaccaagcttggcaagcccattccttcgaccgagcccagtatggtaacccagact
tcgacctctgcagcttccagtaagccagcaggtccagccacggccagcggaaccatcagt
actacttctgctgcctcctccagcacttcgtcatacttgaaacctgtcaatatagtgagc
agtggggtaccgaacaaaaccactgcctctgctgctgctgcatccacagtcagtgcttcc
actgtgaagaaaatagctgcaccaaagatcaattttgtgggaggtaacagattacagact
actggtgctaaaatggaggagattaaaaacgatggtgcaaagtcagtgcagcctgtgatg
cacgccacccaaacacaggagatgaaggttgacgtggcaccggagccagtttcaacacag
gctacacttgctgctttacaaagtgatgtgcagcctgttggacatgactatgtggaagag
gttcgaaatgatgagggcaaagtgatcagattccattgtaagttgtgtgaatgtagcttc
aatgatccaaatgcaaaggagatgcatctgaagggaaggaggcacagactacagtacaag
aaaaaagtaaatccagaactgcaagtggaagtgaagcccagcatccgagccaggaagatc
caggaggagaagatgaggaaacaaatgcagaaggaggaatactggaggagacgtgaggaa
gaggagcgctggagaatggaaatgagtgttggttacaggcgatatgaggaggacatgtac
tggcgccggatggaagaggagcagcaccactgggatgagcgccgcaggatgccagatggg
ggatatccacagggaccccctgctcccccaggcctgctgggagtccgaccaggcatgccc
attcctcagccacagggaccagtgccccctcggcgcccagactcgtcggatgaccgttat
gtaatgaccaaacacgctgctatttacccagtggaagaggaactgcaggctatccagaaa
atagtgtccatcaccgagcgtgctctcaaactggtgtcggacattattactgatcaggat
aataagaccaaggaagatgagaagaacgatgcccagagagacaggtacaccggagcaaag
gctctgaagggtgtcatgcgtgtgggagtgctggctaaaggactgctgttaaagggagac
aagaacgtcaacctggtcctcttgtgctcggagaaacccaacagcaatcttctgacccgc
atcgtggaaaacctccctaaacagcttgcgctggtcacaccagagaaatacgaggtcaag
ggttctaatgaagaagccgccattatcctgacttcctgcgtcgagcctagaatgcaggtg
atcatcaccctgacgtctccaatcatcagagaggagaacgcacgcgacggagatgtaccc
tcgggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctg
gctgctctccgccacgctaagtggttccaggctagagccaatggactgcagtcgtgcgtg
attattatccgcattctacgggacctttgtcagcgtgtcccaacctgggctgcgttccca
agctgggctatggagctacttgtggagaaagctataagcagtgctgctggacccctgagc
ccaggagatgcgttgagaagagtttttgaatgtatttcttctgggatactgcttccaggt
ggtccaggcctggtagacccctgtgagaagaatcccaccgatacactaacgtcagtgtcc
gagcagcagcgggaggacattacctccagtgcgcagtttgctctgagattgctagcattc
cggcagatccacaaagtcctgggaatggaccccttgccgcagatgaacccgcgcttcagc
gtccgcaacacccggaagaggaggcgggacaacagcgacggcgtggatgggtttgaagga
gagggaaagaaggacaagaaagattacgacaactattag
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