Acipenser ruthenus (sterlet): 117403984
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Entry
117403984 CDS
T07327
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117403984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117403984
03009 Ribosome biogenesis [BR:
arut03009
]
117403984
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117403984
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117403984
Pre-60S particles
117403984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
Arm
HEAT_2
Vac14_Fab1_bd
IBN_N
Cnd1
TPR_IPO5
TOR1L1_N
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
HEAT_GCN1_C
MMS19_C
HEAT_Maestro
Ltn1_1st
Dopey_N
UNC45-central
SCD
RTP1_C1
TPR_TTI1_C
HEAT_MROH2B_1st
VPS15-like_hel
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
117403984
NCBI-ProteinID:
XP_033862438
LinkDB
All DBs
Position
2:7329268..7378253
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AA seq
896 aa
AA seq
DB search
MVWQTKMEYEWKPDEQGLQQILQLLKESQSPDTSTQRTVQQKLEQLNQYPDFNNYLIFVL
TKLKSEDEPTRSLSGLILKNNVKTHFHNFPNGVSDFIKNECLKNIGDTSPLIRATVGILI
TTIASKGELQNWPELLPKLCVLLDSEDYSTCEGAFGALQKICEDSAEILDSDILDRPLNI
MIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALATDEEPEVRKN
VCRALVMLLEVRMDRLLPHMHNIVEYMLLRTQDQDENVALEACEFWLTLAEQPVCKEVLC
VHLSKLIPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQQHEADGI
EEDDDDDDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHLLPLLKELLFHPEWVIK
ESGILVLGAIAEGCMQGMILYLPELIPHLVQCLSDKKALVRSITCWTLSRYAHWVVSQPP
DTYLKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLGYILDTLVFAFSKYQ
HKNLLILYDAIGTLADSVGHHLNKPEYIEMLMPPLIQKWNQLKDEDKDLFPLLECLSSVA
TALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEVPDKDFMIVALDLLSGLAEG
LGGSIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILG
TNLNPELISVCNNATWAIGEISIQMGAEMQPYIAMVLHQLVEIINRPNTPKTLLENTAIT
IGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISANPGGVVQDFIF
FCDAVASWVSPKDDLRDMFCKILHGFKNQVGDENWKRFSDQFPLPLKERLAAYYGV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggtttggcaaaccaagatggagtacgagtggaaaccagatgagcaaggacttcagcaa
attctacagcttctgaaagagtcccagtctccggatacctccacacagcgaaccgtccag
caaaaacttgagcagctaaatcagtatccagacttcaacaactacttgatctttgtgtta
acaaagttgaaatcggaagatgaacccaccagatctcttagcggtctgattctgaaaaac
aatgtgaagacacattttcacaactttccaaatggggtgtcggacttcataaaaaacgag
tgtttaaaaaacattggagacacatcgccgttgataagagccactgtgggtattttgatc
acaactattgcctcaaagggagagctacagaattggccggaactccttcccaagttatgt
gtgcttttagactctgaggattacagtacctgtgagggagcatttggagcgcttcagaag
atctgtgaagattcggctgaaattctggacagtgatattcttgaccgaccactgaatatc
atgataccaaaattcttacagttctttaaacacagcagtccaaaaattaggtcccatgct
gttgcctgtgtcaaccagtttatcattagtagaactcaggcccttatgttacatattgat
tcttttattgagaatctgtttgcactggccactgatgaagagcccgaggtccgtaagaat
gtgtgccgcgccctggtgatgctactggaagttcggatggatcggctgcttcctcacatg
cacaacattgtggagtacatgttgctaagaacccaggaccaggatgagaatgtagctttg
gaggcttgtgagttttggttgacgctagctgagcagccggtctgtaaagaagtgctgtgt
gtacacctttcgaagttaatccctgttcttgtaaatggtatgaagtactctgaaattgac
attattctgctcaagggagacgtggaggaggatgaagcgattccggacagcgagcaagac
atccggccacgtttccaccgctctcgcaccgtggcacagcagcacgaggcagacggcatc
gaggaggatgacgatgatgacgatgaacttgatgatgacgacactatttccgactggaat
ttgaggaaatgttctgctgctgcactcgatgtccttgctaatgtgttccgggacgagctc
ctgcctcacctcctccctctgctgaaggagctgctcttccatcccgaatgggtgatcaag
gagtccggcatcttggttctgggagccatcgctgaaggctgcatgcagggtatgatcctg
tatctcccggagcttatcccccacctcgttcagtgcttgtctgacaagaaggctcttgtc
cgctccattacatgctggacccttagccgctatgcacactgggttgtcagtcagccccca
gacacctacttgaagccactgatgaccgaactgctgaaacgcatcctggacggcaacaag
cgagtacaggaagcggcctgcagtgcctttgctacactagaagaggaggcttgtacggag
ttggtgccctacctcggttatatactcgacacccttgtatttgcttttagcaaataccag
cacaagaacctgctcatcctgtatgatgctataggcactcttgccgactcagtaggccac
catttgaacaagccggagtacatagagatgctgatgccgcccctcatccagaaatggaac
cagctgaaggatgaagacaaggatctgtttcctctgctggagtgcctgtcttcagttgcc
actgccctgcagtctggcttcctcccatactgtgagcctgtgtaccagcgctgtgtgaac
ctggtacagaaaactctagcacaggccatgctgcacaacgcccagccggatcagtatgaa
gtgccagacaaagattttatgattgtagctcttgatttgctcagtggcctcgctgaagga
cttggcggcagcatcgagcagttggtggcgcgcagcaatatcctgacattgatgtatcag
tgtatgcaggataaaatgccagaggtccggcagagttcctttgccttgttgggtgatcta
accaaggcatgtttccagcatgtcaagccatgcattgctgatttcatgccaattttgggc
actaacctcaatcctgaattaatttctgtgtgcaacaatgctacatgggcgattggagag
atttcaattcagatgggtgctgaaatgcagccatacattgctatggtgttacaccagctg
gtggagatcatcaacagacccaatacaccaaagacattattggaaaatacagcaataaca
attggtcgtcttggttacgtttgtcctcaagaggtggctcccatgctacagcagtttata
agaccctggtgcacttcactacgtaatatacgggacaatgaagaaaaagattcagcattt
cggggaatctgcacaatgatcagtgccaacccaggaggtgttgtgcaggatttcatattt
ttctgtgatgctgtagcctcctgggttagtccgaaggatgatctgcgagatatgttctgt
aagatcttacatggatttaaaaaccaggttggagatgaaaactggaagcgattttcagac
cagtttccacttccattgaaggaacgccttgcagcatactatggagtgtaa
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