Acipenser ruthenus (sterlet): 117404101
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Entry
117404101 CDS
T07327
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04137
Mitophagy - animal
arut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117404101
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117404101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117404101
03009 Ribosome biogenesis [BR:
arut03009
]
117404101
04131 Membrane trafficking [BR:
arut04131
]
117404101
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117404101
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117404101
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117404101
Membrane trafficking [BR:
arut04131
]
SNARE
SNARE associated proteins
Others
117404101
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117404101
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117404101
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
AAA_18
DUF815
ABC_tran
IstB_IS21
NB-ARC
TsaE
AAA_24
ResIII
nSTAND_NTPase5
NACHT
Viral_helicase1
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
117404101
NCBI-ProteinID:
XP_034757594
LinkDB
All DBs
Position
2:complement(10410559..10427073)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGDSKSDDLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRESVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNIFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEMPNISWEDIG
GLEDVKRELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSNQGG
AGPSQGSAGGTGGTVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagggggagattccaaaagtgacgatctttccactgcgattttaaaacagaag
agcaggcctaacaggctgattgtggatgagtctatcaatgaggataacagcgtggtttcg
ctttctcaggcaaaaatggatgagctgcagctgttcaggggagacacggtgctgctgaag
gggaagaagaggcgtgagagtgtgtgcatcgtcctctccgatgatacctgctccgatgag
aaagtgcgcatgaacagggtcgtccgcaataacctgagggtccggctgggggatgtcatc
agcatccagccatgccccgatgtgaagtatggtaaacgtatccatgtcctccccattgac
gacactgtggaggggatcactggtaacatcttcgaggtttatctcaagccatacttcctg
gaagcatacaggcccatcaggaaaggagatattttcctggtacgaggaggaatgcgagct
gtggaattcaaggtggtggagacagaccccagcccatactgtatagtggctcctgacaca
gtgattcactgtgagggagagcccattaagagagaggatgaggaggagtctctcaatgaa
gttgggtacgatgacattggaggagtgaggaaacagctggcccagattaaggaaatggtg
gagctccctctcagacatcctgcacttttcaaggctattggagtcaagcctcctcgtggt
attctgttgtatggaccccctggtactggcaagaccctgattgctcgagctgtggctaat
gagactggagctttcttcttcctcattaatggtcctgaaattatgagcaaactagctgga
gagtccgagagcaacctgagaaaagcatttgaagaagccgagaagaacgccccagccatc
atcttcattgatgagctggatgccattgcaccaaagagagagaagactcatggagaggtg
gagaggcgcattgtgtctcagctgttgactctgatggacggtctgaagcagagggcacac
gtcattgtcatggcagctaccaacaggccaaacagcattgacccagccctcagacgattt
ggtcgctttgacagagaggtggatatcggtattcctgatgccacaggacgactggaaatc
ctgcagattcacacaaagaacatgaaactggctgacgatgttgaccttgaacaggttgct
aatgagacccatggtcatgtgggtgccgatctggccgctctctgctcagaggctgctctg
caggccatcaggaagaagatggacctcatcgacctggaagatgagaccattgatgccgag
gtcatgaactcgctggcagtcaccatggatgacttcaggtgggctctgagccagagcaac
ccatcagccctgcgtgagactgtggtggagatgccaaatatctcatgggaagatattggt
ggtctggaggatgtcaagagagagctgcaggagcttgtacagtacccagtggagcatcca
gagaagttcctgaagtttgggatgaccccctccaaaggcgtgctgttctacgggcctcct
ggttgtggtaagactctactggccaaagccattgccaacgagtgccaggccaacttcatc
tccatcaagggtcctgagctgcttaccatgtggttcggagagtctgaggccaacgtgcgt
gagatcttcgacaaggcccgtcaagctgccccctgtgtcttgttcttcgacgagctggat
tccattgctaaggctcgcggtgggaatgttggggatggtggtggagcggcagacagagtc
atcaaccagatcctgacggagatggacggcatgtccagcaagaagaacgtcttcatcatt
ggggccaccaacagacctgacatcatcgacccggccatcctgcgacccggccgactggac
cagctcatctacatccccctgcctgacgagaagtcccgtatttccatcctcaaggccaac
ctcaggaagtctcctatttccaaggatgtagatgttgatttcctggccaagatgaccaat
ggcttctctggagctgacttgacagagatctgccagcgcgcctgcaagctagccatccga
gagtccattgagaatgagatccggcgggaacgcgagaggcagaccaacccttctgccatg
gaggtagaggaggatgaccccgttcctgagattcgcaaggatcatttcgaggaggccatg
cgtttcgctcgccgctctgtcagtgacaatgacatccgcaagtacgagatgttcgcacag
accttgcagcagagccgcggattcggcagcttcagattccccaccagtaaccagggaggt
gctggaccaagccagggctctgctggcggcaccggcggcacagtcttcaacgaggacaac
gacgatgacctgtacggttaa
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