Acipenser ruthenus (sterlet): 117404428
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Entry
117404428 CDS
T07327
Name
(RefSeq) transcription factor Sox-19b-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117404428
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117404428
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117404428
NCBI-ProteinID:
XP_034770728
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Position
52:complement(3312698..3323415)
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AA seq
296 aa
AA seq
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MYSMMEHELKSPGPPPSHHPGSGMSPVGSGVGGNHPGAKGACPPGSDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDYK
YKPRRKSKPLLKKDNPAGKYPLSAGNLLAVAAAQGPGGSPRMDSYGWGPTGGYAGMQSEA
LGYPQQLHRYELSTLQYPPGMATAQSYMSGANSYSPMSYGGNAQQASSVMSMVKPEPVSH
SPTGAPSHHRGGLQGDLRDMISMYIPSNDTTDPAGQRGYSSVQQHYLNGTVPLTHI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtatgatggaacatgagttaaagtcaccggggcctccgccgtcccatcatccc
ggctcgggcatgtcacctgtcgggagcggcgtgggaggtaaccatcccggggcgaagggt
gcttgccctcccggcagcgaccccatggacaaagttaagcgacctatgaacgccttcatg
gtgtggtcccggggccagcgacgaaaaatggctcaggaaaaccccaaaatgcacaactca
gagattagcaaacgactaggcgccgagtggaagctactgacagacgctgaaaagcgacct
ttcatcgacgaggccaagcgcctgagggcgctgcacatgaaggagtaccccgactacaag
tataagcccaggcgcaagagcaagcctctcttgaagaaggacaacccggctggcaagtac
cctctctcggccggcaacctgcttgcggtggcggcggctcagggacccggagggagtccc
agaatggacagctacggctggggccctactggggggtacgcgggcatgcagagcgaggcc
cttgggtacccccagcagctgcatcgctacgaactgtcgaccctgcagtacccccctggc
atggccacagcacagagttacatgagcggcgcaaattcctacagccccatgtcttacgga
ggaaacgctcagcaggccagctccgtgatgtcaatggtaaaacccgagccggtgtctcac
tcccccactggggcccccagccaccaccgagggggcctgcagggggacctgagagacatg
atcagcatgtacatccccagcaacgacacgacggaccccgcaggacagaggggctacagc
agcgtacagcagcactacctgaacgggactgtacccctgacacacatctga
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