KEGG   Acipenser ruthenus (sterlet): 117404489
Entry
117404489         CDS       T07327                                 
Name
(RefSeq) netrin-1 isoform X1
  KO
K06843  netrin 1
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:arut00536]
    117404489
Glycosaminoglycan binding proteins [BR:arut00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   117404489
SSDB
Motif
Pfam: Laminin_N NTR EGF_laminin EGF_LMN_ATRN F5_F8_type_C DUF7630
Other DBs
NCBI-GeneID: 117404489
NCBI-ProteinID: XP_033863242
LinkDB
Position
56:56410..76202
AA seq 669 aa
MAGLLCFPFPSFPLLLLLLSRSILSHVPLRWTVAASQDPCDDGQGGPNHCLPEFINAAFG
RSVETRGEEPGISENVTSLTDLHNPHNLTCVHRRTNQDHTLTISLGRRFELTYISLQFCS
GLQNFIWSVSILKSMDFGKSWRPFQFYSPHCLAQFGRPAQTVVPSRTQESEALCSDPRPL
QQHRGGMVLAFAILDGRPSASDYDFSSILQDWATATDIRIVFHKVSDSPGGTGVRLRDTE
AGSSRSREGLGGKRRASRRGDGVRFGGKEKMKNSIDFLDVMKEELGNRKSSGIRRGLKRA
EAGLEVKETPGRRNKKTATRGDAAEMSVPSAPWLSLSDVQVGGRCKCNGHASRCRRDPEG
GAVCECRHNTAGPDCDVCKPFYCDRPWQRASPGQPHHCVSCQCNLHSTRCRFNMELYQLS
GRRSGGVCLGCRHNTAGRHCHYCKEGFTRDQTKPLTHRKACKPCSCHPVGALEKGCNQTS
RQCRCRDGVTGLTCNRCAPGYQQSRSPLRPCTRIEEIVTTTPAYPPQHSLGGGRVRMNLW
TYCQKDYVLKVQVQAMVRSGSWWHFSVSVQSVFRRGTPGIRKGIRAVWVPERDLACGCPP
LQVGRTYLLISSEIGPDENRVVADRTSLALPWRDHWSPKLRGFRTQDRRGRCRAEGPHKP
RTRPTEPPN
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggccggactcctctgctttccttttccttccttccctctactcctcctcttactttct
cgctccatcctgtcccacgtccctttgcgctggactgtggcagcctctcaggacccctgc
gacgacgggcaaggagggccgaatcactgcctgcccgaattcatcaacgcagccttcggg
agatcagttgagacccgtggagaggaaccaggaatctctgaaaacgtcacgtcgcttacc
gacctgcacaaccctcacaacctgacctgcgtccacaggagaacaaaccaggaccatacc
ctgaccatctccctggggcgcagatttgagttgacttatatcagcctgcagttctgctct
gggttgcagaacttcatctggtccgtctccattctcaagtccatggattttgggaaatcc
tggagaccttttcagttctactcccctcactgtctggcccagtttggccgcccggctcag
acagtggtcccgtcgaggacccaagaaagcgaggccctgtgttcggacccccggcccctg
cagcagcacagaggagggatggtcctggctttcgcaatcttggatggacgaccctccgcc
tcagattacgacttcagttccattctacaagactgggccactgctacagatatcaggata
gttttccacaaggtctcagattccccaggtggaacgggggttcggcttcgggacacagaa
gcagggtctagcagaagtagggaggggctaggtggaaagaggcgagcctccaggagagga
gatggggtgaggtttggaggtaaagagaagatgaagaattcaattgattttcttgatgta
atgaaggaggagctagggaacaggaagtcaagcggaattaggagggggttgaaaagggca
gaggcagggcttgaagttaaagagactccaggaaggaggaacaagaaaacggccaccaga
ggtgatgctgcagagatgtcagtgccgagcgccccctggctgtccctctcggatgtgcag
gtggggggccgctgtaagtgtaacgggcatgcctcgcgctgcaggcgagatcccgagggt
ggggcagtgtgcgagtgtcgacacaacacggccgggcccgattgtgacgtctgcaaaccg
ttctactgcgaccgtccctggcaaagagccagccccggacagccacaccactgcgtctcc
tgtcagtgtaacctccactccactaggtgtcgcttcaacatggagttgtaccagctctca
ggccggagaagtgggggggtgtgtctgggctgccgtcacaacacggctgggcgacactgt
cactactgcaaagaaggcttcactcgagaccaaaccaaaccactcactcaccgcaaggcc
tgcaaaccttgctcgtgtcacccagtgggtgctttggagaaggggtgtaaccagacctcg
agacagtgtcgctgccgagacggggtgacgggactgacctgtaaccgttgcgccccggga
taccagcagagtcgatccccactgagaccctgcacacgaatcgaggaaatagtcacaact
actccagcctacccacctcaacacagcctgggaggcgggagagtgaggatgaacctgtgg
acctactgtcagaaagactacgtgctgaaggtgcaggtgcaggctatggtgcgctccgga
tcctggtggcacttctccgtgtctgtgcagtcggtgttccgccgcgggacgcctggaatt
cgtaaggggattcgggcagtgtgggtgccggagcgggacctggcctgtggctgccccccc
ttacaggtgggtcgcacctacttgctgatcagctccgagatcgggccggatgagaaccgc
gtcgtagccgaccggacttcactggcactgccctggagggaccactggagccccaaactg
agaggcttcaggacccaggacagacggggccgatgcagggctgaaggaccccacaaaccc
agaacacgacccaccgaacccccaaactga

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