Acipenser ruthenus (sterlet): 117404489
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Entry
117404489 CDS
T07327
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117404489
Glycosaminoglycan binding proteins [BR:
arut00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117404489
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
DUF7630
Motif
Other DBs
NCBI-GeneID:
117404489
NCBI-ProteinID:
XP_033863242
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Position
56:56410..76202
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AA seq
669 aa
AA seq
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MAGLLCFPFPSFPLLLLLLSRSILSHVPLRWTVAASQDPCDDGQGGPNHCLPEFINAAFG
RSVETRGEEPGISENVTSLTDLHNPHNLTCVHRRTNQDHTLTISLGRRFELTYISLQFCS
GLQNFIWSVSILKSMDFGKSWRPFQFYSPHCLAQFGRPAQTVVPSRTQESEALCSDPRPL
QQHRGGMVLAFAILDGRPSASDYDFSSILQDWATATDIRIVFHKVSDSPGGTGVRLRDTE
AGSSRSREGLGGKRRASRRGDGVRFGGKEKMKNSIDFLDVMKEELGNRKSSGIRRGLKRA
EAGLEVKETPGRRNKKTATRGDAAEMSVPSAPWLSLSDVQVGGRCKCNGHASRCRRDPEG
GAVCECRHNTAGPDCDVCKPFYCDRPWQRASPGQPHHCVSCQCNLHSTRCRFNMELYQLS
GRRSGGVCLGCRHNTAGRHCHYCKEGFTRDQTKPLTHRKACKPCSCHPVGALEKGCNQTS
RQCRCRDGVTGLTCNRCAPGYQQSRSPLRPCTRIEEIVTTTPAYPPQHSLGGGRVRMNLW
TYCQKDYVLKVQVQAMVRSGSWWHFSVSVQSVFRRGTPGIRKGIRAVWVPERDLACGCPP
LQVGRTYLLISSEIGPDENRVVADRTSLALPWRDHWSPKLRGFRTQDRRGRCRAEGPHKP
RTRPTEPPN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggccggactcctctgctttccttttccttccttccctctactcctcctcttactttct
cgctccatcctgtcccacgtccctttgcgctggactgtggcagcctctcaggacccctgc
gacgacgggcaaggagggccgaatcactgcctgcccgaattcatcaacgcagccttcggg
agatcagttgagacccgtggagaggaaccaggaatctctgaaaacgtcacgtcgcttacc
gacctgcacaaccctcacaacctgacctgcgtccacaggagaacaaaccaggaccatacc
ctgaccatctccctggggcgcagatttgagttgacttatatcagcctgcagttctgctct
gggttgcagaacttcatctggtccgtctccattctcaagtccatggattttgggaaatcc
tggagaccttttcagttctactcccctcactgtctggcccagtttggccgcccggctcag
acagtggtcccgtcgaggacccaagaaagcgaggccctgtgttcggacccccggcccctg
cagcagcacagaggagggatggtcctggctttcgcaatcttggatggacgaccctccgcc
tcagattacgacttcagttccattctacaagactgggccactgctacagatatcaggata
gttttccacaaggtctcagattccccaggtggaacgggggttcggcttcgggacacagaa
gcagggtctagcagaagtagggaggggctaggtggaaagaggcgagcctccaggagagga
gatggggtgaggtttggaggtaaagagaagatgaagaattcaattgattttcttgatgta
atgaaggaggagctagggaacaggaagtcaagcggaattaggagggggttgaaaagggca
gaggcagggcttgaagttaaagagactccaggaaggaggaacaagaaaacggccaccaga
ggtgatgctgcagagatgtcagtgccgagcgccccctggctgtccctctcggatgtgcag
gtggggggccgctgtaagtgtaacgggcatgcctcgcgctgcaggcgagatcccgagggt
ggggcagtgtgcgagtgtcgacacaacacggccgggcccgattgtgacgtctgcaaaccg
ttctactgcgaccgtccctggcaaagagccagccccggacagccacaccactgcgtctcc
tgtcagtgtaacctccactccactaggtgtcgcttcaacatggagttgtaccagctctca
ggccggagaagtgggggggtgtgtctgggctgccgtcacaacacggctgggcgacactgt
cactactgcaaagaaggcttcactcgagaccaaaccaaaccactcactcaccgcaaggcc
tgcaaaccttgctcgtgtcacccagtgggtgctttggagaaggggtgtaaccagacctcg
agacagtgtcgctgccgagacggggtgacgggactgacctgtaaccgttgcgccccggga
taccagcagagtcgatccccactgagaccctgcacacgaatcgaggaaatagtcacaact
actccagcctacccacctcaacacagcctgggaggcgggagagtgaggatgaacctgtgg
acctactgtcagaaagactacgtgctgaaggtgcaggtgcaggctatggtgcgctccgga
tcctggtggcacttctccgtgtctgtgcagtcggtgttccgccgcgggacgcctggaatt
cgtaaggggattcgggcagtgtgggtgccggagcgggacctggcctgtggctgccccccc
ttacaggtgggtcgcacctacttgctgatcagctccgagatcgggccggatgagaaccgc
gtcgtagccgaccggacttcactggcactgccctggagggaccactggagccccaaactg
agaggcttcaggacccaggacagacggggccgatgcagggctgaaggaccccacaaaccc
agaacacgacccaccgaacccccaaactga
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