Acipenser ruthenus (sterlet): 117404620
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Entry
117404620 CDS
T07327
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117404620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117404620
Ion channels [BR:
arut04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117404620
BRITE hierarchy
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117404620
NCBI-ProteinID:
XP_033863430
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Position
56:607457..627337
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AA seq
490 aa
AA seq
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MQALAIILVVSCLGVLADASEGENNLTAKLYKDYNLKVRPAKETGDRVRVRVGMTLASLV
SVTEKNEEVTTNVFMDLAWTDYRLSWNPAEHDNIQVLRIPSARVWRPDIYLINNNDGVFD
VALHVHVQVYSDGMVTWTPPAIYRSTCGIKVTFFPFDWQNCTMVFRSYTYDASEIDLQHA
LDKKGNEVREVTIDSSFSENGEWLIRHMPSRKNVGDDLYEDITFYLIIERKPLFYVFNII
IPCLLITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKVPETSLGVPIIVNYLM
FTMILVTFSVILSVVVLNLHHRSSSTHDMPLWVRKIFIHLLPRYLGLLRPKKETPLELGL
HPKRETPGCVNRAADEYFIRKPNCNFLHPKQNRYQNENQTSDMRRFINGPSQYLTLPPDL
KSAVDAITYIAEQLQAEQDDGALTEDWQYVAMVVDRLFLWIFVIFTTVGTLAIFMDASFN
GTPLDPFLSP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcactggcaattattcttgtggtgtcctgccttggtgtcttggctgacgcctct
gaaggagagaacaacctgacagccaaactgtacaaggactacaacctgaaggtgcgccca
gcgaaggagacgggggacagggtgagggtgagggtgggcatgaccctggcctcgctcgtc
agtgtgactgagaagaatgaagaggtgaccaccaatgtgttcatggatctggcctggaca
gattaccggttgagttggaacccagcggaacacgacaacatccaggtactgagaattcct
tcagcgagggtgtggcgtccggatatctacctcattaacaataatgatggcgtttttgac
gtggctcttcatgttcacgtacaagtctacagcgatggcatggtcacctggaccccccct
gccatctaccgcagcacgtgcggcatcaaggtgacgttcttccctttcgactggcagaac
tgcaccatggtgttccgctcgtacacctacgacgcctccgagatcgatctgcagcacgcg
ctcgataagaaaggcaacgaggtccgggaagtcactatcgacagcagcttcagcgagaac
ggggagtggctgatccgccacatgccgtcgcggaagaacgtgggagacgacttgtacgaa
gacatcaccttctacctgatcatcgagcgcaagcctctcttctacgtcttcaacatcatc
atcccctgccttctcatcaccatcattgccatattcaacttctacctccctcctgacgca
ggtgagaagatgggtctgtccatcaatgtgctgctgaccctcactgtgttcctgctgctg
ttagctgacaaggttcctgagacctccctaggagtgcccatcatagtcaactacctgatg
ttcaccatgatcctggtcaccttctctgtgatcctgagtgtggtggtgctgaacctgcac
caccgctcctccagcacgcacgacatgcccctctgggtgcgcaagatattcattcacctg
ctccctcggtacctgggtctgctgcggcccaagaaagagacacccctggagttgggcctg
caccccaagagagagactccggggtgtgtgaacagagctgcggacgagtacttcatccgc
aaacccaactgcaacttcctgcaccccaaacagaaccgttaccagaatgagaaccagacc
tcagacatgcgacgcttcattaacgggcccagtcagtacctcactctgcctccagatctc
aagtcggctgtggacgcgatcacctacatagcagaacagctccaggcagagcaggacgac
ggagcgttgacagaggactggcagtacgtagcgatggtagtggaccgcctcttcctctgg
atcttcgttatcttcactacggtgggcacactcgccatcttcatggacgccagcttcaac
gggacccccctcgaccccttcctcagcccctag
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